BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0010.p (708 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300313726|ref|YP_003777818.1| sugar ABC transporter permease ... 501 e-142 gi|300313727|ref|YP_003777819.1| sugar ABC transporter permease ... 483 e-137 gi|300310397|ref|YP_003774489.1| ribose/xylose/arabinose/galacto... 149 1e-36 gi|300310064|ref|YP_003774156.1| sugar ABC transporter permease ... 147 2e-36 gi|300310383|ref|YP_003774475.1| sugar ABC transporter permease ... 112 1e-25 >gi|300313726|ref|YP_003777818.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] Length = 342 Score = 501 bits (1289), Expect = e-142, Method: Compositional matrix adjust. Identities = 262/336 (77%), Positives = 289/336 (86%) Query: 370 SSMNIMADTAPVKTARYDIGERGSFRIADLLRQWEFLLGLLLVAVFCINCLLLPHFLDFY 429 SSM+ M + A +RY I E+ F+ DLLR WE LL +LLV V +N LLLPHF D Y Sbjct: 2 SSMSSMNEPASPPRSRYRIDEKARFQPRDLLRHWEALLAILLVLVCAVNGLLLPHFFDPY 61 Query: 430 NLADSTFNFSEKALIALPMALLIICREIDISVSAVIALSSVAMGVANHYGVPAVGLFVVG 489 NLADSTFNFSEKA+IALPMALLIICREIDISVSA+IAL+SVAMG+AN GVP +GL +V Sbjct: 62 NLADSTFNFSEKAMIALPMALLIICREIDISVSAIIALASVAMGLANQAGVPPLGLLLVA 121 Query: 490 IGTGTLCGLLNGLLVTRFALPSIVVTIGSMSLFRGLASVVLGDQAFTNYPELLSDWGQGY 549 I TGT CGLLNG LVTR LPSIVVTIGSMSLFRGLASVVLGDQAFT YPE+L DWGQGY Sbjct: 122 IATGTACGLLNGALVTRLGLPSIVVTIGSMSLFRGLASVVLGDQAFTQYPEVLGDWGQGY 181 Query: 550 FFDVLPRPFAVLIVAALAFAALLHCTAWGRRIYAIGNNPVAARFSGIAVDRYRLMLFVLT 609 FFDVLPRPF V ++AA+ FA LLH T WGRR+YAIGNNPVAARFSG+AVDRYRL LFVLT Sbjct: 182 FFDVLPRPFVVWLLAAVVFAVLLHVTRWGRRLYAIGNNPVAARFSGVAVDRYRLALFVLT 241 Query: 610 GAMAGLAGCLLTGRIGSTRPNIALGWELEIITVVILGGVSIAGGAGTIGGVLLAVLTLGM 669 GAMAGLA LTGRIGSTRPNIA+GWELEIITVVILGGVSIAGG G+IGGV+L+VL +GM Sbjct: 242 GAMAGLAAFFLTGRIGSTRPNIAMGWELEIITVVILGGVSIAGGTGSIGGVMLSVLVMGM 301 Query: 670 VTYGLALANIPGIIMTIVVGALLLTTIAVPRLLRGK 705 +TYGLALANIPGIIMTIVVGALLL TIA+PRLLRG+ Sbjct: 302 LTYGLALANIPGIIMTIVVGALLLATIAIPRLLRGR 337 Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 106/297 (35%), Positives = 162/297 (54%), Gaps = 6/297 (2%) Query: 48 GLRAPAFLTMRSMDNLLTDSALPVMLALTQMLVIVTRGIDLSVASNLALSGMMSALLAMH 107 GL P F ++ + + + M+AL L+I+ R ID+SV++ +AL+ + L A Sbjct: 51 GLLLPHFFDPYNLADSTFNFSEKAMIALPMALLIICREIDISVSAIIALASVAMGL-ANQ 109 Query: 108 FPQLPIGLVIACALCIGLALGLINGWLIGYLSLPPIVVTLGSMSVYRGLVFVLSGG-AWV 166 P+GL++ A+ G A GL+NG L+ L LP IVVT+GSMS++RGL V+ G A+ Sbjct: 110 AGVPPLGLLL-VAIATGTACGLLNGALVTRLGLPSIVVTIGSMSLFRGLASVVLGDQAFT 168 Query: 167 SSRNMPADFIAFPLGRLMGLTHLVWLAALAIVVLWFVARHTRFGRDLYAIGNDPVAAGYV 226 + D+ ++ +VWL LA VV + TR+GR LYAIGN+PVAA + Sbjct: 169 QYPEVLGDWGQGYFFDVLPRPFVVWL--LAAVVFAVLLHVTRWGRRLYAIGNNPVAARFS 226 Query: 227 GIASPQRLFWTYGLSGAMAGLCGYLWVARYAVAYTEIAYGFELTVIAACVIGGISIAGGV 286 G+A + + L+GAMAGL + R IA G+EL +I ++GG+SIAGG Sbjct: 227 GVAVDRYRLALFVLTGAMAGLAAFFLTGRIGSTRPNIAMGWELEIITVVILGGVSIAGGT 286 Query: 287 GNISGAVLGALFLAVINNALPMVQISPFWQSALTGLVILSAVIINARXARARARARR 343 G+I G +L L + ++ L + I + + G ++L+ + I R R R A R Sbjct: 287 GSIGGVMLSVLVMGMLTYGLALANIPGIIMTIVVGALLLATIAI-PRLLRGRQGAGR 342 >gi|300313727|ref|YP_003777819.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] Length = 352 Score = 483 bits (1244), Expect = e-137, Method: Compositional matrix adjust. Identities = 262/339 (77%), Positives = 289/339 (85%), Gaps = 11/339 (3%) Query: 2 SLNQNSGPAPGPGLGHPPLFSRLSGLASRPREPLLAVLIAALILLVGLRAPAFLTMRSMD 61 SL +S P G PL+ R REPLLA+L LILLVG+RAP FL+ +SMD Sbjct: 8 SLRASSAPGREAG---EPLWQR--------REPLLALLTVVLILLVGVRAPVFLSAQSMD 56 Query: 62 NLLTDSALPVMLALTQMLVIVTRGIDLSVASNLALSGMMSALLAMHFPQLPIGLVIACAL 121 NLLTDSA+ +MLAL QMLVI+TRGIDLSVASNLALSGMMSALLAMHFP LP+G+ I A+ Sbjct: 57 NLLTDSAITIMLALAQMLVILTRGIDLSVASNLALSGMMSALLAMHFPALPVGVFILMAV 116 Query: 122 CIGLALGLINGWLIGYLSLPPIVVTLGSMSVYRGLVFVLSGGAWVSSRNMPADFIAFPLG 181 IGL LGL+NGWLIGYL LPPIVVTLGSMSVYRG+VFVLSGGAWVSSRNMPADFIAFPL Sbjct: 117 LIGLMLGLLNGWLIGYLELPPIVVTLGSMSVYRGMVFVLSGGAWVSSRNMPADFIAFPLA 176 Query: 182 RLMGLTHLVWLAALAIVVLWFVARHTRFGRDLYAIGNDPVAAGYVGIASPQRLFWTYGLS 241 RL GLTHLVWL ALA+V +WF+ARHTRFGRDLYAIGNDP AA YVGIAS RL WTYGLS Sbjct: 177 RLGGLTHLVWLGALAVVAIWFLARHTRFGRDLYAIGNDPAAAAYVGIASRGRLLWTYGLS 236 Query: 242 GAMAGLCGYLWVARYAVAYTEIAYGFELTVIAACVIGGISIAGGVGNISGAVLGALFLAV 301 GAMAGL GYLWVARYAVAYTEIAYGFELTVIAACVIGG+SIAGGVG +SGAVLGALFL+V Sbjct: 237 GAMAGLAGYLWVARYAVAYTEIAYGFELTVIAACVIGGVSIAGGVGQVSGAVLGALFLSV 296 Query: 302 INNALPMVQISPFWQSALTGLVILSAVIINARXARARAR 340 INNALP+++ISPFWQSALTGLVIL AV++NAR + R + Sbjct: 297 INNALPIMRISPFWQSALTGLVILCAVVLNARGKQGRRK 335 Score = 126 bits (317), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 155/300 (51%), Gaps = 27/300 (9%) Query: 423 PHFLDFYNLADSTFNFSEKALIALPMALLIICREIDISVSAVIALSSVAMGV-ANHYGVP 481 P FL ++ + + + ++AL L+I+ R ID+SV++ +ALS + + A H+ Sbjct: 47 PVFLSAQSMDNLLTDSAITIMLALAQMLVILTRGIDLSVASNLALSGMMSALLAMHFPAL 106 Query: 482 AVGLFV-VGIGTGTLCGLLNGLLVTRFALPSIVVTIGSMSLFRGLASVVLGDQAFT--NY 538 VG+F+ + + G + GLLNG L+ LP IVVT+GSMS++RG+ V+ G + N Sbjct: 107 PVGVFILMAVLIGLMLGLLNGWLIGYLELPPIVVTLGSMSVYRGMVFVLSGGAWVSSRNM 166 Query: 539 PELLSDWGQGYFFDVLPRPFAVL----------IVAALAFAALLHCTAWGRRIYAIGNNP 588 P D + P A L +A +A L T +GR +YAIGN+P Sbjct: 167 PA-----------DFIAFPLARLGGLTHLVWLGALAVVAIWFLARHTRFGRDLYAIGNDP 215 Query: 589 VAARFSGIAVDRYRLMLFVLTGAMAGLAGCLLTGRIGSTRPNIALGWELEIITVVILGGV 648 AA + GIA L + L+GAMAGLAG L R IA G+EL +I ++GGV Sbjct: 216 AAAAYVGIASRGRLLWTYGLSGAMAGLAGYLWVARYAVAYTEIAYGFELTVIAACVIGGV 275 Query: 649 SIAGGAGTIGGVLLAVLTLGMVTYGLALANIPGIIMTIVVGALLLTTIAVPRLLRGKATR 708 SIAGG G + G +L L L ++ L + I + + G ++L + + RGK R Sbjct: 276 SIAGGVGQVSGAVLGALFLSVINNALPIMRISPFWQSALTGLVILCAVVLNA--RGKQGR 333 >gi|300310397|ref|YP_003774489.1| ribose/xylose/arabinose/galactoside ABC transporter permease [Herbaspirillum seropedicae SmR1] Length = 328 Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 170/295 (57%), Gaps = 4/295 (1%) Query: 411 LVAVFCINCLLLPHFLDFYNLADSTFNFSEKALIALPMALLIICREIDISVSAVIALS-S 469 LV V + L +F N + S ++A+ M+ +I+ ID+SV A +AL+ + Sbjct: 36 LVVVSLLMGLASDNFFTLSNWFNVLRQVSIVGILAVGMSFVILTGGIDLSVGAAMALAGT 95 Query: 470 VAMGVANHYGVPAVGLFVVGIGTGTLCGLLNGLLVTRFALPSIVVTIGSMSLFRGLASVV 529 ++ G+ + G+PA + G+G T GLLNG LV +P+I+VT+ +M + RG+ + Sbjct: 96 ISAGLIVNSGLPAPLALLCGVGLATCIGLLNGALVAWGRMPAIIVTLATMGVARGVGLIY 155 Query: 530 LGDQAFTNYPELLSDWGQGYFFDVLPRP-FAVLIVAALAFAALLHCTAWGRRIYAIGNNP 588 G + P +S +G G ++P P +LIV ALA+ LL TA+GR +YAIG N Sbjct: 156 SGGYPISGLPGWISWFGVGRI-GMVPVPVILMLIVYALAWL-LLQRTAFGRHVYAIGGNE 213 Query: 589 VAARFSGIAVDRYRLMLFVLTGAMAGLAGCLLTGRIGSTRPNIALGWELEIITVVILGGV 648 +AAR SG+ R +L ++ ++G +GLA +LTGR+ S +PN +G+EL+ I V+LGG Sbjct: 214 MAARLSGVKTTRIKLAVYAISGFTSGLAAIILTGRLMSGQPNAGVGFELDAIAAVVLGGT 273 Query: 649 SIAGGAGTIGGVLLAVLTLGMVTYGLALANIPGIIMTIVVGALLLTTIAVPRLLR 703 +IAGG G + G L+ + LG++ GL L I + I+ G ++L I + R R Sbjct: 274 AIAGGRGLVVGTLIGAVLLGILNNGLNLMGINPYLQDIIRGVIILLAIYIAREWR 328 Score = 145 bits (367), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 166/292 (56%), Gaps = 4/292 (1%) Query: 45 LLVGLRAPAFLTMRSMDNLLTDSALPVMLALTQMLVIVTRGIDLSVASNLALSGMMSALL 104 LL+GL + F T+ + N+L ++ +LA+ VI+T GIDLSV + +AL+G +SA L Sbjct: 41 LLMGLASDNFFTLSNWFNVLRQVSIVGILAVGMSFVILTGGIDLSVGAAMALAGTISAGL 100 Query: 105 AMHFPQLPIGLVIACALCIGLALGLINGWLIGYLSLPPIVVTLGSMSVYRGLVFVLSGGA 164 ++ LP L + C + + +GL+NG L+ + +P I+VTL +M V RG+ + SGG Sbjct: 101 IVN-SGLPAPLALLCGVGLATCIGLLNGALVAWGRMPAIIVTLATMGVARGVGLIYSGGY 159 Query: 165 WVSSRNMPADFIAFPLGRLMGLTHLVWLAALAIVVLWFVARHTRFGRDLYAIGNDPVAAG 224 +S +P F +GR+ + V L + + W + + T FGR +YAIG + +AA Sbjct: 160 PIS--GLPGWISWFGVGRIGMVPVPVILMLIVYALAWLLLQRTAFGRHVYAIGGNEMAAR 217 Query: 225 YVGIASPQRLFWTYGLSGAMAGLCGYLWVARYAVAYTEIAYGFELTVIAACVIGGISIAG 284 G+ + + Y +SG +GL + R GFEL IAA V+GG +IAG Sbjct: 218 LSGVKTTRIKLAVYAISGFTSGLAAIILTGRLMSGQPNAGVGFELDAIAAVVLGGTAIAG 277 Query: 285 GVGNISGAVLGALFLAVINNALPMVQISPFWQSALTGLVILSAVIINARXAR 336 G G + G ++GA+ L ++NN L ++ I+P+ Q + G++IL A+ I AR R Sbjct: 278 GRGLVVGTLIGAVLLGILNNGLNLMGINPYLQDIIRGVIILLAIYI-AREWR 328 >gi|300310064|ref|YP_003774156.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] Length = 344 Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 165/296 (55%), Gaps = 12/296 (4%) Query: 54 FLTMRSMDNLLTDSALPVMLALTQMLVIVTRGIDLSVASNLALSGMMSALLAMHFPQLPI 113 F + + N+L A+ ++LA VI+T GIDLSV S LA+S ++ + + P Sbjct: 60 FASAENTMNILRQVAINLVLAAGMTFVILTAGIDLSVGSVLAVSAVLG--MQVSLGAAP- 116 Query: 114 GLVIACALCIGLALGLINGWLIGYLSLPPIVVTLGSMSVYRGLVFVLSGGAWVSSRNMPA 173 G I + GL +G++NG ++ L++ VVTLG+M+ +RG ++L+ G V + ++P+ Sbjct: 117 GWAIPMFIFSGLVMGMVNGAMVALLNINAFVVTLGTMTAFRGAAYLLADGTTVLNNDIPS 176 Query: 174 DFIAFPLGRLMGLTHLVWLAALAIVVLWFVARHTRFGRDLYAIGNDPVAAGYVGIASPQR 233 F G + + L+W+A +++ W + R T G +YAIG + AA GI Sbjct: 177 -FEWIGNGDFLHVPWLIWVAVAVVLLSWVILRKTVLGMHIYAIGGNLQAARLTGIRVGLV 235 Query: 234 LFWTYGLSGAMAGLCGYLWVARYAVAYTEIAYGFELTVIAACVIGGISIAGGVGNISGAV 293 L + Y +SG +GL G + +R A G+EL IAA V+GG S+ GGVG+I G V Sbjct: 236 LLFVYSISGLFSGLAGAMSASRLYGANGNWGSGYELDAIAAVVLGGTSLMGGVGSIWGTV 295 Query: 294 LGALFLAVINNALPMVQISPFWQSALTGLVILSAVIINARXARARARARRKETQQA 349 +GAL + V+NN L ++ +S FWQ G VI+ AVI++ + R+K+ Q+ Sbjct: 296 VGALIIGVMNNGLTILGLSSFWQYVAKGAVIVLAVILD--------KWRQKDAAQS 343 Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 103/353 (29%), Positives = 169/353 (47%), Gaps = 30/353 (8%) Query: 375 MADTAPVKTARYDIGERGSFRIADLLRQWEFLLGLLLVAVFCINCLLLPHFLDFYNLADS 434 MADT T +D G+ R + QW LL L + + LL + L Y D Sbjct: 1 MADTKMTHT--HDAVPPGARRSSSTTAQW--LLHRLGMLPVLVVLYLLFYGLTLYLSGDG 56 Query: 435 TFNFSEKA-------------LIALPMALLIICREIDISVSAVIALSSV-----AMGVAN 476 T NF+ ++A M +I+ ID+SV +V+A+S+V ++G A Sbjct: 57 TSNFASAENTMNILRQVAINLVLAAGMTFVILTAGIDLSVGSVLAVSAVLGMQVSLGAAP 116 Query: 477 HYGVPAVGLFVVGIGTGTLCGLLNGLLVTRFALPSIVVTIGSMSLFRGLASVVLGDQAFT 536 + +P +F+ +G + G++NG +V + + VVT+G+M+ FRG A ++ Sbjct: 117 GWAIP---MFIF---SGLVMGMVNGAMVALLNINAFVVTLGTMTAFRGAAYLLADGTTVL 170 Query: 537 NYPELLSDW-GQGYFFDVLPRPFAVLIVAALAFAALLHCTAWGRRIYAIGNNPVAARFSG 595 N +W G G F V P V + L +L T G IYAIG N AAR +G Sbjct: 171 NNDIPSFEWIGNGDFLHV-PWLIWVAVAVVLLSWVILRKTVLGMHIYAIGGNLQAARLTG 229 Query: 596 IAVDRYRLMLFVLTGAMAGLAGCLLTGRIGSTRPNIALGWELEIITVVILGGVSIAGGAG 655 I V L ++ ++G +GLAG + R+ N G+EL+ I V+LGG S+ GG G Sbjct: 230 IRVGLVLLFVYSISGLFSGLAGAMSASRLYGANGNWGSGYELDAIAAVVLGGTSLMGGVG 289 Query: 656 TIGGVLLAVLTLGMVTYGLALANIPGIIMTIVVGALLLTTIAVPRLLRGKATR 708 +I G ++ L +G++ GL + + + GA+++ + + + + A + Sbjct: 290 SIWGTVVGALIIGVMNNGLTILGLSSFWQYVAKGAVIVLAVILDKWRQKDAAQ 342 >gi|300310383|ref|YP_003774475.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] Length = 347 Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 175/330 (53%), Gaps = 16/330 (4%) Query: 20 LFSRLSGLASRPREPLLAVLIAALILLVGLRAPAFLTMRSMDNLLTDSALPVMLALTQML 79 L +RL A+R + A L+ +IL +P F+ + ++ ++L +A+ +LA+ Sbjct: 24 LRARLFNPAARQKLLAFASLL-LMILFFSFASPNFMEVDNLVSILQSTAVNGVLAIACTY 82 Query: 80 VIVTRGIDLSVASNLALSGMMSALLAMHFPQLPIGLVIACALCIGLALGLINGWLIGYLS 139 VI+T GIDLSV + + +M+ ++ ++ +P+ L IA A+ G G I+G +I L Sbjct: 83 VIITSGIDLSVGTMMTFCAVMAGVVLTNW-GMPLPLGIAAAIFFGALSGWISGMVIAKLK 141 Query: 140 LPPIVVTLGSMSVYRGLVFVLSGGAWVSSRNMPADFIAFPLGRLMGLTHLVWLAALAIVV 199 +PP + TLG M + +GL V+SG + N F A L+G A+++ Sbjct: 142 VPPFIATLGMMMLLKGLSLVISGTRPI-YFNDTEGFSAIAQDSLIGDLIPSLPIPNAVLI 200 Query: 200 LWFVA-------RHTRFGRDLYAIGNDPVAAGYVGIASPQRLFWT---YGLSGAMAGLCG 249 L+ VA T FGR +A+G++ A G+ FW Y SGA+ G+ G Sbjct: 201 LFLVAIGASIILNKTVFGRYTFALGSNEEALRLSGVKVD---FWKVAVYTFSGAICGIAG 257 Query: 250 YLWVARYAVAYTEIAYGFELTVIAACVIGGISIAGGVGNISGAVLGALFLAVINNALPMV 309 + +R A + G+EL IAA VIGG S++GG G I G ++GA ++V+ N L ++ Sbjct: 258 LIIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTILGTIIGAFIMSVLVNGLRIM 317 Query: 310 QISPFWQSALTGLVILSAVIINARXARARA 339 ++ WQ+ +TG++I+ AV ++ R RA Sbjct: 318 SVAQEWQTVVTGVIIILAVYLDILRRRRRA 347 Score = 109 bits (273), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 86/291 (29%), Positives = 159/291 (54%), Gaps = 8/291 (2%) Query: 423 PHFLDFYNLADSTFNFSEKALIALPMALLIICREIDISVSAVIALSSVAMGVA-NHYGVP 481 P+F++ NL + + ++A+ +II ID+SV ++ +V GV ++G+P Sbjct: 55 PNFMEVDNLVSILQSTAVNGVLAIACTYVIITSGIDLSVGTMMTFCAVMAGVVLTNWGMP 114 Query: 482 AVGLFVVGIGTGTLCGLLNGLLVTRFALPSIVVTIGSMSLFRGLASVVLGDQA-FTNYPE 540 I G L G ++G+++ + +P + T+G M L +GL+ V+ G + + N E Sbjct: 115 LPLGIAAAIFFGALSGWISGMVIAKLKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTE 174 Query: 541 LLSDWGQ----GYFFDVLPRPFAVLIVAALAFAA--LLHCTAWGRRIYAIGNNPVAARFS 594 S Q G LP P AVLI+ +A A +L+ T +GR +A+G+N A R S Sbjct: 175 GFSAIAQDSLIGDLIPSLPIPNAVLILFLVAIGASIILNKTVFGRYTFALGSNEEALRLS 234 Query: 595 GIAVDRYRLMLFVLTGAMAGLAGCLLTGRIGSTRPNIALGWELEIITVVILGGVSIAGGA 654 G+ VD +++ ++ +GA+ G+AG ++ R+ S +P + G+EL+ I V++GG S++GG Sbjct: 235 GVKVDFWKVAVYTFSGAICGIAGLIIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGT 294 Query: 655 GTIGGVLLAVLTLGMVTYGLALANIPGIIMTIVVGALLLTTIAVPRLLRGK 705 GTI G ++ + ++ GL + ++ T+V G +++ + + L R + Sbjct: 295 GTILGTIIGAFIMSVLVNGLRIMSVAQEWQTVVTGVIIILAVYLDILRRRR 345 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.328 0.142 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,741,808 Number of extensions: 63792 Number of successful extensions: 544 Number of sequences better than 1.0e-08: 22 Number of HSP's gapped: 521 Number of HSP's successfully gapped: 42 Length of query: 708 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 616 Effective length of database: 1,184,250 Effective search space: 729498000 Effective search space used: 729498000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 134 (56.2 bits)