BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0212.p
         (685 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311791|ref|YP_003775883.1| phosphatidylserine/phosphatidyl...   821   0.0  

>gi|300311791|ref|YP_003775883.1|
           phosphatidylserine/phosphatidylglycerophosphate/
           cardiolipin synthase [Herbaspirillum seropedicae SmR1]
          Length = 775

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/666 (62%), Positives = 492/666 (73%), Gaps = 21/666 (3%)

Query: 33  PGGAGDGYPEALGDFLNALVEERPQLHVYILNWDFAMLYALEREWPPAYKHGWRKRRRFY 92
           P G+ DG P  LGD L+ALVE +P LH+ +LNWD+AMLYALEREW    K G  + +R +
Sbjct: 76  PQGSDDGLPAQLGDLLHALVERQPDLHIRVLNWDYAMLYALEREWMMVRKPGRPRNKRLH 135

Query: 93  FHMDASHPVGASHHQKVVVIDDKLAFAGGIDLTRNRWDTSEHAPDQPLRRDIDDKPYGPF 152
           F  DA HPVGASHHQK+VVIDD+LAF GG+DLTR RWD  EH PD PLRRD DD+PY PF
Sbjct: 136 FRTDARHPVGASHHQKIVVIDDQLAFVGGLDLTRCRWDNQEHLPDHPLRRDPDDRPYAPF 195

Query: 153 HDVQAMVDAEAAAALGELARERWTRAGCKP-------------ALPPNKAKDGDDLWPTG 199
           HDVQAM D E A A+G LAR RW  AG                A          D WP  
Sbjct: 196 HDVQAMADGEVARAMGVLARRRWALAGYAEKSTEKHTDTTEARATAAESTLAASDPWPPA 255

Query: 200 VEPDLGDVEIGIARTEPERDGGGGIHEIRQLYLDAIAAARHSLFFENQYFTSNVLHDALA 259
             PDL DV IGI+RTEP  +   G++E+R+LYLDAIA AR  LFFENQYFTSNVL +AL 
Sbjct: 256 FVPDLQDVMIGISRTEPAYEDRPGVYEVRELYLDAIAEARQHLFFENQYFTSNVLAEALG 315

Query: 260 ARLAEDDAPEVVVVSPQNQSGWLEQATMGHLRARIHQRLKAA--DQ----HGRYRMYCPQ 313
           ARL E D PEV V+SP+ QSGWLEQATMG LRARIH RLKAA  DQ      RY+MYCP 
Sbjct: 316 ARLREPDGPEVAVISPRTQSGWLEQATMGALRARIHHRLKAALADQGEGAERRYQMYCPH 375

Query: 314 LAG-EQDGCLNVHSKVFAVDDHLFCVGSANMSNRSMTYDTECNLVIEAHGDAAQQARIRT 372
           L G E D CLNVHSKVFA+DD LF VGSANMSNRSM +DTECNL IE  GDAA+QA++R 
Sbjct: 376 LPGLEDDCCLNVHSKVFAMDDRLFSVGSANMSNRSMGFDTECNLSIEVQGDAAKQAQVRQ 435

Query: 373 AIAGMRNRLLAEHLDVGVETVRQEIDKTSSLHATIAAL-QSNGRTLIALDPVVLPQIEAL 431
            IA +RNRLL EHL V  + V+Q ++ +  LHA I AL Q   R+L  LDP ++P+++A+
Sbjct: 436 VIATLRNRLLGEHLGVPAQAVQQAMEDSGGLHAAIDALTQPEARSLQPLDPRLIPELDAV 495

Query: 432 MPDKVMFDPETPINPDELIAQFVPGHARKPVPRRLIGLGVFGILLLALALAWRFTPLREW 491
             D  +FDPE PI+PDE++  +VP  ARKPVPRR+IGLGV  +LL+A ALAWRFTPLREW
Sbjct: 496 TQDNAVFDPERPISPDEIVDAYVPRSARKPVPRRMIGLGVLAVLLVAFALAWRFTPLREW 555

Query: 492 LNLNALIVMARSLETLPFTPLAVMAVYVVAGMLMFPVTLLIAVTGIVFGPFYGALYALAG 551
           +NLN+LI +ARS++ LPF+PL VM  +VVAGMLM P+T+LIAV G+VFGP  G LYA  G
Sbjct: 556 INLNSLIALARSVDKLPFSPLIVMTTFVVAGMLMVPITVLIAVAGVVFGPLNGGLYAAVG 615

Query: 552 SLLSALAGFGVGVWLGRETLQQLLGRRVNSLSRRFAQRGIPAMVVIRLLPVAPFTIANVV 611
             LSAL GFGVG WLG + L+ LLG R+N+LSRRFAQRGI AM V+RLLP+APFTI NVV
Sbjct: 616 VGLSALLGFGVGHWLGHDALRDLLGPRINNLSRRFAQRGIAAMAVVRLLPIAPFTIVNVV 675

Query: 612 AGVSHLRLRDYLIGTFLGMAPGIIVTVAFAHNLAEAIRHPSLTTVALLAGMAALLIGMAL 671
           AG SHLRLRDYL+GT LGM+PGI++TV F+HNLAEAIRHPSL TV +L  +   L+ +A 
Sbjct: 676 AGASHLRLRDYLLGTLLGMSPGIVLTVVFSHNLAEAIRHPSLETVLVLVAVTVALMLVAF 735

Query: 672 GLQKLF 677
           GLQKLF
Sbjct: 736 GLQKLF 741


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.139    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,962,949
Number of extensions: 79063
Number of successful extensions: 241
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 236
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1,619,870
Length adjustment: 92
Effective length of query: 593
Effective length of database: 1,184,250
Effective search space: 702260250
Effective search space used: 702260250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 134 (56.2 bits)