BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0059.p
         (343 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like est...   485   e-138
gi|300314035|ref|YP_003778127.1| transmembrane patatin-like phos...    91   2e-19

>gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like
           esterase [Herbaspirillum seropedicae SmR1]
          Length = 338

 Score =  485 bits (1249), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 241/343 (70%), Positives = 279/343 (81%), Gaps = 7/343 (2%)

Query: 1   MQNKIVTLALQGGGSHGAFTWGVLDRLLEDQRIDFEGISGASAGPXAMNATVLAHGYNLG 60
           M NKI++LALQGGGSHGAFTWGVLDRLLED R+ FEGISGASAG  AMNA VLA GY   
Sbjct: 1   MSNKIISLALQGGGSHGAFTWGVLDRLLEDGRLGFEGISGASAG--AMNAVVLAQGYVQD 58

Query: 61  GREGAREALAAFWGRIATKEPFSFLPPEMLPGGSSLLNQSTP-AAMHALLAMTRFFSPTQ 119
           GREGAR AL  FW  ++T  P  ++  E    G+ ++   TP   M ALLAMTRFFSPTQ
Sbjct: 59  GREGARAALERFWTALSTGAPLDYINAE----GAPVIANPTPMPGMQALLAMTRFFSPTQ 114

Query: 120 LNPLDINPLRDILEEQVDFERLRSSGDIKLFIAATRVSTGTLKIFRNRELTVDALLASAC 179
           LNPLDINPLRDIL EQVDF+RLR   ++KLFIAAT+VSTGTLKIFRN +L+V+ALLASAC
Sbjct: 115 LNPLDINPLRDILLEQVDFDRLRRQRELKLFIAATQVSTGTLKIFRNADLSVEALLASAC 174

Query: 180 LPSMHRPVEIDGETYWDGGLTANPPIFPLLHLCTARDLLVVLLHPCSRPGTPTSTQEIGQ 239
           LPS+HRP+EI+GE YWDGGLTANPPIFPLLH C ARD++VVLLHP  R GTPTST +IGQ
Sbjct: 175 LPSLHRPIEIEGEAYWDGGLTANPPIFPLLHACAARDVMVVLLHPSRRAGTPTSTHDIGQ 234

Query: 240 RLSEISFSSAFFTELGGLALAKREAENAMFAFGTLERRLRKLNMHLVEANDLMSQLDVMS 299
           RLSEISFSSAFFTEL  LALAKREAEN+  AFG+LERRLR+LNMH+++AN+LM QL  +S
Sbjct: 235 RLSEISFSSAFFTELSALALAKREAENSTLAFGSLERRLRQLNMHMIDANELMEQLTNLS 294

Query: 300 KLNTKTSFIHGLHDEGRQAAGRWLEKNFHMIGLKSSFDLGRYL 342
           KLNT+ SFI  L  +GR+ A  WLE+NF  +G  S+FDLGR+L
Sbjct: 295 KLNTQASFIGSLFQQGRERAAEWLEQNFAQVGHASTFDLGRFL 337


>gi|300314035|ref|YP_003778127.1| transmembrane patatin-like
           phospholipase [Herbaspirillum seropedicae SmR1]
          Length = 395

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 35/264 (13%)

Query: 6   VTLALQGGGSHGAFTWGVLDRLLEDQRIDF--EGISGASAGPXAMNATVLAHGYNLGGRE 63
           V L LQGGG+ GA+  GV   L E    DF  + + G S G  A+NA ++A       RE
Sbjct: 27  VALVLQGGGALGAYQAGVYQALHEH---DFTPDWVVGTSIG--AINAALIAGN----PRE 77

Query: 64  GAREALAAFWGRIATKEPFSF--LPPEMLPGGSSLLNQSTPAAMHALLAMTRFFSPTQLN 121
              E L  FW  +A  +      +P  + P  + L    T      L     FF P  LN
Sbjct: 78  TRIERLREFWETVAHPDLLDLRTVPDTLRPWATRLTTMDT-----FLRGTPGFFRPRPLN 132

Query: 122 P----LDINP----------LRDILEEQVDFERLRSSGDIKLFIAATRVSTGTLKIFRNR 167
                L + P          L   L   VDF+ L     I++ ++A +VS GTL  F +R
Sbjct: 133 AFALGLPVPPEEASFYSTAELEQTLSRLVDFDYLNGQSGIRMTVSAVKVSCGTLVNFDSR 192

Query: 168 E--LTVDALLASACLPSMHRPVEIDGETYWDGGLTANPPIFPLLHLCTARDLLVVLLHPC 225
           E  L    +LAS  LP    PV ++GE YWDGGL +N P+  +L+     +L+ +++   
Sbjct: 193 EQALGPQHVLASGALPPGFAPVRVEGELYWDGGLYSNTPLEAVLNDTPRTNLVCLMVDLW 252

Query: 226 SRPG-TPTSTQEIGQRLSEISFSS 248
              G  P + +E+  R  +++F+S
Sbjct: 253 HADGPEPRTLEEVVTREKDVTFAS 276


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.137    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,024,616
Number of extensions: 39391
Number of successful extensions: 124
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 120
Number of HSP's successfully gapped: 2
Length of query: 343
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 257
Effective length of database: 1,212,660
Effective search space: 311653620
Effective search space used: 311653620
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 131 (55.1 bits)