BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0018.0025.p
         (708 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisideropho...  1012   0.0  
gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor prote...   265   8e-72
gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece...   257   3e-69
gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein...   248   2e-66
gi|300312129|ref|YP_003776221.1| TonB-dependent ferric sideropho...   221   1e-58

>gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisiderophore
           receptor signal peptide protein, tonB-dependent receptor
           [Herbaspirillum seropedicae SmR1]
          Length = 715

 Score = 1012 bits (2616), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/708 (69%), Positives = 584/708 (82%), Gaps = 16/708 (2%)

Query: 17  APSILLAQTTDST--TSTTPLSSTAAAE---------TNQLPAVTVSADADAETRYNAAK 65
           A +ILLA +  S   TS++ L+ TA  +         +  LP V+V+AD   ++++ A +
Sbjct: 8   ARAILLAFSASSALFTSSSVLAQTAPPQGADSSSTAASAALPTVSVTADGYTDSKFKATQ 67

Query: 66  MQVNKSSVPLSQTPQSISVVPRAVLDSQQAVTLADALKNAPGVVSGQYGRRGWDDLIIRG 125
            QVNKSS PLS+TPQSISVV RA++DSQQAV+L+DALKN  GVV+ QYGRRGWDDLIIRG
Sbjct: 68  TQVNKSSTPLSETPQSISVVTRAMMDSQQAVSLSDALKNVSGVVAQQYGRRGWDDLIIRG 127

Query: 126 QVASDSLYLDGLRTAASNRVAEQLFGLEQVEVVKGPGSLLYGLVLPGGLVNMVSKRPQGY 185
           QVASDSLYLDGLRT AS+RVAEQL+GL+QVEV+KGPGSLLYGLVLPGGLVNMVSKRPQG 
Sbjct: 128 QVASDSLYLDGLRTTASSRVAEQLYGLQQVEVLKGPGSLLYGLVLPGGLVNMVSKRPQGS 187

Query: 186 DFANADVTVGSHDFRQATIDLNKSLSENGKQAFRINGLISNSNDATDYVWFKNRYIAPSL 245
           DFAN DVT+GSHD  Q+T+DLNKSLSENGKQAFRINGLISNS+DATD+VWFKNRYIAPSL
Sbjct: 188 DFANVDVTIGSHDLYQSTVDLNKSLSENGKQAFRINGLISNSDDATDHVWFKNRYIAPSL 247

Query: 246 SLDLGARTDFTILTSFQERGYIRQQGLPLSGSINRNVNGSIPRSRFTGEPAARPYNATET 305
           SLDLGARTDFTILTS+QER Y+RQQGLPLSGSI  N +G + RS F GEP ARPY A ET
Sbjct: 248 SLDLGARTDFTILTSYQERNYVRQQGLPLSGSITPNASGPLARSLFIGEPGARPYAANET 307

Query: 306 RLGYSLTHRFDDGWTLNNNLRWQQFAMSGQLVANTAVTGTTLTRTGTDQTFNGETFTMDT 365
           R+GYSLTHRFDDGWTLNNNLR+QQF MSGQL++   +TGT+LTR+  DQTF G+TFTMDT
Sbjct: 308 RIGYSLTHRFDDGWTLNNNLRYQQFTMSGQLISINNLTGTSLTRSAMDQTFEGQTFTMDT 367

Query: 366 NLQRSFNTAVGKHQVTLGSDYLNTREDVRSFNCTVASL-NVYNPVYGARIACPATPNTNT 424
           N+QRSF TA GKH+VTLG+DY+N+RE  R+  C+V  L N+YNP YGAR+ CP    +  
Sbjct: 368 NVQRSFATAWGKHEVTLGTDYMNSRELERTLTCSVTPLSNIYNPSYGARVVCPTQLTSTN 427

Query: 425 S----TTVRDLGIYLRDQIQFGDRWQLLAGLRRDNTSTYSDNLGTKKHTDNPAGANTGSL 480
           +    T+VRD G Y RD+I  G+RWQLLAG+R+D  +TY+ +  T  H+DN + A T S 
Sbjct: 428 AKLNDTSVRDTGFYARDKISLGERWQLLAGVRQDRAATYTTSALTGSHSDNASSATTASA 487

Query: 481 ALMVEVLRGVRPYVSYSTSFYPNSGTDVGGNTFKPETGKQLEAGVKVELDQGRTNLNVAV 540
           A+MVE+  GVRPY+SY+TSFYPNSGT   G+ FKPETGKQ E GVKV+LD+GRT++N A+
Sbjct: 488 AIMVELWHGVRPYLSYATSFYPNSGTAFDGSIFKPETGKQWETGVKVDLDEGRTSINFAL 547

Query: 541 FDLRRRNVLQTDPTNTAFKIAVGEQHSQGGEIGITSDFQNGVSLMAGYSYTSAVISDDGG 600
           FDLRRRNVL TDP +T++K+A+G Q SQGGEI +TSD +NG+SL A YSYT+A++ DDGG
Sbjct: 548 FDLRRRNVLVTDPDHTSYKMAIGGQRSQGGEISVTSDLRNGLSLNAAYSYTAAIVIDDGG 607

Query: 601 QKVTTVGQWLDNVPRHNFNTSARYRFKGELTGWELNGGVHGQSRQRTNGYSLPGYVLTDV 660
           Q+ TTVGQWLDNVPRHNF TSARYRF GEL+GWELNGGV GQS  RTNGY+LPGYVL D+
Sbjct: 608 QRSTTVGQWLDNVPRHNFTTSARYRFSGELSGWELNGGVRGQSMMRTNGYTLPGYVLADI 667

Query: 661 GVAYNAARWRTALNVKNIFNTQYYAGGLANAVALGDDRVVMLTLGYRY 708
           GVAYNA RWRTALNVKN+FNT+YYAGGL  AVALGDDR VMLTLGYRY
Sbjct: 668 GVAYNAERWRTALNVKNVFNTEYYAGGLGKAVALGDDRTVMLTLGYRY 715


>gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor protein
           [Herbaspirillum seropedicae SmR1]
          Length = 817

 Score =  265 bits (677), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 221/716 (30%), Positives = 336/716 (46%), Gaps = 47/716 (6%)

Query: 28  STTSTTPLSSTAAAETNQLPAVTVSADAD-AETRYNAA-KMQVNKSSVPLSQTPQSISVV 85
           ++ + TP ++T  A +  LPA+ +SA AD  E R+ A       K++ PL + PQSISVV
Sbjct: 114 ASEAATPSAATTPAASGSLPAIQISASADPGEQRWTARDSASTTKTATPLIEVPQSISVV 173

Query: 86  PRAVLDSQQAVTLADALKNAPGVVSGQYGRRGWDDLI-IRGQVA-SDSLYLDGLRTAASN 143
               + +  A T  DAL   PGV    YG     D I +RG  A S   YLDGL    +N
Sbjct: 174 TAERIAAMGATTARDALGYTPGVNISPYGSDSRYDWINLRGFDAYSPGFYLDGLPLRNAN 233

Query: 144 RVA---EQLFGLEQVEVVKGPGSLLYGLVLPGGLVNMVSKRPQGYDFANADVTVGSHDFR 200
             A    + +G+EQ+ V++GP S+LYG   PGG+VN+VSK P         V +GS   R
Sbjct: 234 SFAVWRTENYGIEQLAVLRGPASVLYGQAGPGGVVNVVSKLPSADAPRELQVQLGSDRRR 293

Query: 201 QATIDLNKSLSENGKQAFRINGLISNSNDATDYVWFKNRYIAPSLSLDLGARTDFTILTS 260
           Q   D+  ++  +G+  +R+ G++ ++      +     Y+APSL   + A T  T+  +
Sbjct: 294 QVGADIGGAIDADGRLLYRVIGVVRDAELPAGGMKNDRLYLAPSLVWKISAATSLTLQAA 353

Query: 261 -FQERGYIRQQGLPLSGSINRNVNG-SIPRSRFTGEPAARPYNATETRLGYSLTHRFDDG 318
             +++G +  +  PL GS+     G +IP   +TG P    ++  +   GY L HRFD+ 
Sbjct: 354 LLRDQGGVYTRTRPLVGSLVPTAIGTTIPSELYTGNPHFDHFSQDQELFGYRLAHRFDER 413

Query: 319 WTLNNNLRW------------QQFAMSGQLVANTAVTGTTLTRTGTDQTFNGETFTMDTN 366
           +    + R              +FA       N  V    LTR       +   F++D  
Sbjct: 414 FAFTQSARVGHMSTDYRAVQTPRFATLNAANPNDPVNFQNLTRNLFGSRESATMFSIDNQ 473

Query: 367 LQRSFNTAVGKHQVTLGSDYLNTREDVRSFNCTVAS-LNVYNPVY-GARIACPATPNTNT 424
           LQ  F+T   +H V  G DY  +R D  SF+   A  LN+  P Y       PA P ++ 
Sbjct: 474 LQADFSTGAVRHTVLAGVDYQRSRFDAVSFSGGSAPLLNIAAPSYPNGPFVVPA-PYSDN 532

Query: 425 STTVRDLGIYLRDQIQFGDRWQLLAGLRRDNTSTYSDNLGTKKHTDNPAGANTGSLALMV 484
              +   GIYL+DQI++ + W++  G R D+ S+  DN      T +     T   A++ 
Sbjct: 533 RAVLTQTGIYLQDQIKWNNGWEVTLGGRHDSASSTVDNRLDGSRTSSTDRKFTRRAAVLY 592

Query: 485 EVLRGVRPYVSYSTSFYPNSGTDVGGN-TFKPETGKQLEAGVKVELDQGRTNLNVAVFDL 543
               G+ PY+SY+ SF P +  +   N +F PETGKQ E G++ +        + A+FDL
Sbjct: 593 HAANGLAPYLSYTESFNPTATVNPLTNQSFGPETGKQTEVGLRYQPPGTNDLYSAALFDL 652

Query: 544 RRRNVLQTD----PTNTAFKIAVGEQHSQGGEIGITSDFQNGVSLMAGYSYTS-AVISDD 598
           +R+N +  D    PT        GE   +G E+   +     + L A YSYT  AV++  
Sbjct: 653 KRQNYISYDANFMPTQK------GEIAVRGLELEAVTQPMAALRLTAAYSYTPRAVVT-- 704

Query: 599 GGQKVTTVGQWLDNVPRHNFNTSARYRFKGELTGWELNGGVHGQSRQRTNG----YSLPG 654
              +   +G+    V  H F+    +R      G  L  G    S    NG      +PG
Sbjct: 705 ASSRPAEIGKQAAAVLLHQFSVWGDHRLG---NGVRLGLGARYVSATSGNGGGTPVKVPG 761

Query: 655 YVLTDVGVAYNAARWRTALNVKNIFNTQYY--AGGLANAVALGDDRVVMLTLGYRY 708
           Y L D  + Y+ ARW  ALN++N+ + +Y       A+    GD R V+ T  YR+
Sbjct: 762 YTLLDGLLGYDFARWSLALNLRNLTDKRYLTNCDTTASMCYYGDQRSVLATASYRW 817


>gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore
           receptor protein [Herbaspirillum seropedicae SmR1]
          Length = 705

 Score =  257 bits (656), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 221/730 (30%), Positives = 354/730 (48%), Gaps = 47/730 (6%)

Query: 1   MSFKRTRAALLGLATIAPSILLAQTTDSTTSTTPLSSTAAAETNQLPAVTVSADADAETR 60
           M     RAA+LG      ++ L QT     S +  +  A  +   L  + V+   + +  
Sbjct: 1   MKMTALRAAVLG------ALALGQTP----SVSWAADAAGKQEGDLGEIVVTGQGERQQY 50

Query: 61  YNAAKMQVNKSSVPLSQTPQSISVVPRAVLDSQQAVTLADALKNAPGVVSGQYGRRGWDD 120
             ++     ++  PL + PQS+ VV R ++D   A  L D L    GV         WD+
Sbjct: 51  RQSSTSSATRTETPLQELPQSVQVVSRQLIDDLAATRLDDVLLYVSGVARQNNFGGLWDN 110

Query: 121 LIIRGQVASDSLYLDGLRTA-ASNR---VAEQLFGLEQVEVVKGPGSLLYGLVLPGGLVN 176
             IRG   S++  ++ L    ASNR       +  +E V+ +KGP + LYG   PGG +N
Sbjct: 111 YSIRGFSGSENGGMNILWNGFASNRGYAPPRDMANVESVDFLKGPAAALYGNSEPGGTIN 170

Query: 177 MVSKRPQGYDFANA-DVTVGSHDFRQATIDLNKSLSENGKQAFRINGLISNSNDATDYVW 235
           +V+K+PQ +  ANA D+++GS+D  ++ +D   +LS     A+R+N  + +     D V 
Sbjct: 171 VVTKKPQ-FKSANALDLSIGSNDAYRSAVDSTGALSST--VAYRLNAAMEHKGSMRDQVR 227

Query: 236 FKNRYIAPSLSLDLGARTDFTILTSFQERGYIRQQGLPLSGSINRNVN-GSIPRSRFTGE 294
            +  + AP+ +  L   T+ TIL    E  ++RQ+     G +  N N G +P SRF GE
Sbjct: 228 SEREFFAPAFTWLL---TENTILN--YEGEFLRQKAPLDRGIVAVNGNAGVLPVSRFLGE 282

Query: 295 PAARPYNATETRLGYSLTHRFDDGWTLNNNLRWQQFAMSGQLVANTAVTG--TTLTRTGT 352
           P              +L  R ++ W L   +  ++ ++ G      A+     TL R   
Sbjct: 283 PNDGDIKMQNQNHLLTLEQRLNENWHLRTGIFHKEGSLDGYSTEAFALQADNATLRRQRR 342

Query: 353 DQTFNGETFTMDTNLQRSFNTAVGKHQVTLGS--DYLNTREDVRSFNCT-VA--SLNVYN 407
            + ++    ++   +   F TA   H+V +G+  D+L   + +   N + VA  ++N+YN
Sbjct: 343 YRDYSWHDTSLQAEIGGKFATAGVGHEVLVGTEVDWLTLDQRMLRINPSNVAPYAVNIYN 402

Query: 408 PVYGARIACPATPNTNTSTTVRDL--GIYLRDQIQFGDRWQLLAGLRRDNTSTYSDNLGT 465
           PVYG   A P TP  NT T+ R +  G+YL+DQ+   +RW+LLAG+R D   +  +NL  
Sbjct: 403 PVYGQ--AQP-TPTANTDTSERQISTGLYLQDQLSLSERWRLLAGVRADAFRSTLNNLRN 459

Query: 466 KKHTDNPAGANTGSLALMVEVLRGVRPYVSYSTSFYPNSGTDVGGNTFKPETGKQLEAGV 525
              T     A +  L L   +      YVS S SF PNSG+DV GN F PET +  EAG+
Sbjct: 460 GAVTRQDKHAYSPRLGLTYLLTPSWSVYVSASKSFRPNSGSDVSGNAFSPETSRAAEAGL 519

Query: 526 KVELDQGRTNLNVAVFDLRRRNVLQTDPTNTAFKIAVGEQHSQGGEIGITSDFQNGVSLM 585
           K + +  R+   +AVFD+ ++NVL TDP N  F IA GE  S+G E+   +   +   + 
Sbjct: 520 KFQSEDKRSGATLAVFDITKQNVLTTDPANPNFSIAAGEVRSKGVELDANARLGHHWRVT 579

Query: 586 AGYSYTSAVISDDGGQKVTTVGQWLDNVPRHNFNTSARYR-FKGELTGWELNGGVHGQSR 644
              +YT A +S D       VG  L N+PR + +  A +         + + GG++   R
Sbjct: 580 GNLAYTDAYVSRD---NTLPVGSRLVNIPRSSASLLAVFEDADAHGAPYGVGGGLNYVGR 636

Query: 645 Q---RTNGYSLPGYVLTDVGVAY--NAARWRTALNVKNIFNTQYYAGGLANA-VALGDDR 698
           +   +   + LP YV T   +AY     + + +L+V N+FN +YY+    +  +  GD+R
Sbjct: 637 RTGDQAGSFMLPSYV-TARALAYWQFTPKMKLSLDVNNLFNKRYYSSSYNSLWIMPGDER 695

Query: 699 VVMLTLGYRY 708
              L L  ++
Sbjct: 696 NATLALNIKF 705


>gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein
           [Herbaspirillum seropedicae SmR1]
          Length = 705

 Score =  248 bits (632), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 205/694 (29%), Positives = 315/694 (45%), Gaps = 50/694 (7%)

Query: 46  LPAVTVSADADAETR----YNAAK-MQVNKSSVPLSQTPQSISVVPRAVLDSQQAVTLAD 100
           LP V + ADA+        Y A +     K+  P+ + PQS+SVV R  +D++   +L D
Sbjct: 31  LPQVEIKADAETANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEMDARGVTSLLD 90

Query: 101 ALKNAPGVVSGQYG--RRGWDDLIIRG----QVASDSLYLDGLRTAASN--RVAEQLFGL 152
            L+  PG  S  +G   RG++   +RG    QV S+  +L+GLR       +   + +G+
Sbjct: 91  VLRYMPGANSETHGVDPRGYEYFNLRGFINAQVTSN--FLNGLRQIPGGFGQFRTETYGM 148

Query: 153 EQVEVVKGPGSLLYGLVLPGGLVNMVSKRPQGYDFANA-DVTVGSHDFRQATIDLNKSLS 211
           E++EV++GPGS+ +G   PGG++N VSK P G D  N   V +GS + +Q   DLN   +
Sbjct: 149 ERIEVLRGPGSVTFGQADPGGVINRVSKLP-GMDIPNELGVDIGSFNRKQVVADLNGH-T 206

Query: 212 ENGKQAFRINGLISNSNDATDY----VWFKNR-YIAPSLSLDLGARTDFTILTSFQERGY 266
           ++G+  +R+ GL  +SN+   +        NR Y+APSL+    A T  T++  +     
Sbjct: 207 QDGEYLWRVVGLGLDSNNQYKFNNGQSGDNNRFYLAPSLTWRPSASTSLTLMADYMND-- 264

Query: 267 IRQQGLPLSGSINRNV--NGSIPRSRFTGEPAARPYNATETRLGYSLTHRFDDGWTLNNN 324
                   SGS        G++      G+P     +  +   GY   H+FD+ WT   N
Sbjct: 265 -------RSGSSRWTAVRPGNVLTHTLIGDPNFDRQSNDQWSFGYQFEHKFDNAWTFRQN 317

Query: 325 LRWQQFAMSGQLVANTAVTGTTLTRTGTDQTFNGETFTMDTNLQRSFNTAVGKHQVTLGS 384
            R          +    +TG+ LTR  T      +   +D  L+        +H V  G 
Sbjct: 318 FRQANLKSVYAALNPGTLTGSVLTRGTTVYNSQVDNTLVDNQLEGRLKWGATEHTVLFGL 377

Query: 385 DYLNTREDVRSFNCTVASLNVYNPVYGARIACPATPNTNTSTTVRDLGIYLRDQIQFGDR 444
           D+    +    +     SLN+ NPVYG  I    T   N    +   G+Y +DQI+F  R
Sbjct: 378 DWSRMYDREVRYRGAAPSLNIDNPVYGVTIPAATTLFGNLEENMNQTGLYAQDQIKFDQR 437

Query: 445 WQLLAGLRRDNTSTYSDNLGTKKHTDNPAGANTGSLALMVEVLRGVRPYVSYSTSFYPNS 504
             L  G R D     + N   +  T +   A +G + L   V R + PYVSY+TSF P +
Sbjct: 438 LTLTLGGRWDKVKDETRNYFNRTTTRSDDSALSGRIGLSYLVTRDIAPYVSYATSFLPQT 497

Query: 505 GTDVGGNTFKPETGKQLEAGVKVELDQGRTNLNVAVFDLRRRNVLQTDPTNTAFKIAVGE 564
           G+D  G  F P   +Q E G+K +   G+T    A+F+L + NV   DP +T F +  GE
Sbjct: 498 GSDFNGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTNVQTPDPAHTNFNVLSGE 557

Query: 565 QHSQGGEIGITSDFQNGVSLMAGYSYTSAVISDDGGQKVTTVGQWLDNVPRHNFNTSARY 624
             S+G E+    +   G++L A Y+YT   + +      + +G+    VPR   +  A Y
Sbjct: 558 IKSRGLELEAKGEIVKGLNLSASYTYTD--VKNTQNNTASLLGKQPILVPRQAASVWADY 615

Query: 625 RFK-------GELTGWELNGGVHGQSRQRTNGYSLPGYVLTDVGVAYNAARWRTALNVKN 677
             +       G   G    G  +  +    N     G  + D    YN  RWR ALN+ N
Sbjct: 616 TVQGGPLAGAGIGGGARYTGSNYADA---ANTVKNGGVTVFDAVFHYNLNRWRYALNISN 672

Query: 678 IFNTQYYAGGLANAVA---LGDDRVVMLTLGYRY 708
           I N + Y   LA          +R  +L+  YR+
Sbjct: 673 ITNKE-YTSCLAEPTTTCFWAAERTAILSARYRW 705


>gi|300312129|ref|YP_003776221.1| TonB-dependent ferric siderophore
           receptor protein [Herbaspirillum seropedicae SmR1]
          Length = 796

 Score =  221 bits (563), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 205/713 (28%), Positives = 333/713 (46%), Gaps = 66/713 (9%)

Query: 28  STTSTTPLSSTAAAETNQLPAVTVSADADAE-TRYNA-AKMQVNKSSVPLSQTPQSISVV 85
           STTSTT   +  A    +LP ++V+A AD+  T + A +    +++  PLS+TP+S+SV+
Sbjct: 118 STTSTTETPAHKAIADAELPLISVAATADSGGTGFVAESSATFSRTDTPLSETPKSVSVI 177

Query: 86  PRAVLDSQQAVTLADALKNAPGVVSGQYGRRGWDDLIIRGQVASDSLYLDGLRT---AAS 142
             AV+ SQ A TL+D L+NA GVV+ + G  G     IRG V +  +  DGL +   AAS
Sbjct: 178 NAAVIQSQSAQTLSDVLRNASGVVA-RPGPYGVPSFAIRGYVGNAPVMSDGLSSYGSAAS 236

Query: 143 NRVAEQLFGLEQVEVVKGPGSLLYGLVLPGGLVNMVSKRPQGYDFANADVTVGSHDFRQA 202
                    +  VEVVKGP +++     PGG+VN++ K PQ   F    V  GS+ F Q 
Sbjct: 237 PAALTPTIAIAGVEVVKGPSAIMAADAPPGGVVNVIKKAPQVEPFHEVQVAYGSNSFSQV 296

Query: 203 TIDLNKSLSENGKQAFRINGLISNSNDATDYVWF---KNRYIAPSLS-------LDLG-- 250
             D   ++ E+ +  +R   ++S    + +++ +   ++ YIAP+L        L LG  
Sbjct: 297 AFDSTGAIDEDKRLRYRF--VVSADKSSENFMGYDGGRHFYIAPTLQWKDRSTDLTLGYA 354

Query: 251 ---ARTDFTILTSFQERG-----YIRQQGLPLSGSINRNVNGSIPRSRFTGEPAARPYNA 302
               R  F   T    RG     Y+     PL    NR  + S+     T +        
Sbjct: 355 HTVTREPFPQYTVGYARGGYVDGYVEH---PLG---NRGDHFSMTADELTAK-------- 400

Query: 303 TETRLGYSLTHRFDDGWTLNNNLRWQQFAMSGQLVANTAVTGTTLTRTGTDQTFNGETFT 362
            E +L  +LT    +G+T             G   A+T      LT  G   + N  T  
Sbjct: 401 LEQKLSDNLTFVSKNGYTSTTQ------GQDGWAAASTVTNSNALTLLGFKSSANYYTAN 454

Query: 363 MDTNLQRSFNTAVGKHQVTLGSDY--LNTREDVRSFNCTVASLNVYNPVYGARIACPATP 420
               L+   + A  K    +G DY  ++  +  R+ + T    +++  +  A I+ P T 
Sbjct: 455 SQNYLRLKSDLAGVKSTTLVGVDYSYMHYVQYDRNSSSTTTIPDIFGTINVAPISSPLTY 514

Query: 421 NTNTSTTVRDLGIYLRDQIQFGDRWQLLAGLRRDNTSTYSDNLGTKKHTDNPAGANTGSL 480
                T  + +G YL++Q+ + +   +LA +RRD+  + ++ +G          A + SL
Sbjct: 515 QFGGQT--QRVGSYLQEQLIYSN-LTVLASIRRDSYLSSTNIVGRAPSGGMHQTAYSPSL 571

Query: 481 ALMVEVLRGVRPYVSYSTSFYPNSGTDVGGNTFKPETGKQLEAGVKVELDQGRTNLNVAV 540
            LM ++   + PYV+++  F PN+ T  GG    P+  +Q EAGVK  L   +  L  A+
Sbjct: 572 GLMYQLTPEIAPYVNWNKGFQPNNVTAYGGGLLAPKQSEQFEAGVKFNLMDDKLELTTAL 631

Query: 541 FDLRRRNVLQTDPTNTAFKIAVGEQHSQGGEIGITSDFQNGVSLMAGYSYTSAVISDDGG 600
           + +   N   +DP +  F I+ G   SQG E+ +      G++++A Y+Y + V      
Sbjct: 632 YHIDYTNQSISDPVHRGFYISTGGAVSQGLEVELKGQIMPGLNVIAQYAYNNYVQDYAPT 691

Query: 601 QKVTTVGQWLDNVPRHNFNTSARYRFKGE-LTGWELNGGVH---GQSRQRTNGYSLPGYV 656
            KV        N+P H  +    Y F+   L G+ +  GV    GQ    T  Y +PG  
Sbjct: 692 VKV--------NLPHHTGSIWTTYNFRSPALQGFGVGMGVFMSSGQDVGSTGNYHVPGQT 743

Query: 657 LTDVGVAYNAARWRTALNVKNIFNTQYYAGGL-ANAVALGDDRVVMLTLGYRY 708
            TD+G+ Y   ++   L+VKN+FN + Y+    A+ + +G +R +MLT  Y +
Sbjct: 744 ETDLGLFYKMEKYSLNLSVKNLFNHKLYSSSTSASFIPMGPERTLMLTGTYDF 796


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.315    0.131    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,039,542
Number of extensions: 83465
Number of successful extensions: 328
Number of sequences better than 1.0e-08: 18
Number of HSP's gapped: 266
Number of HSP's successfully gapped: 20
Length of query: 708
Length of database: 1,619,870
Length adjustment: 92
Effective length of query: 616
Effective length of database: 1,184,250
Effective search space: 729498000
Effective search space used: 729498000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 134 (56.2 bits)