BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0022.p (938 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310808|ref|YP_003774900.1| NAD-dependent formate dehydroge... 1824 0.0 gi|300312208|ref|YP_003776300.1| assimilatory nitrate reductase ... 290 3e-79 gi|300311101|ref|YP_003775193.1| NADH dehydrogenase I subunit G ... 193 6e-50 gi|300310774|ref|YP_003774866.1| anaerobic formate dehydrogenase... 131 2e-31 gi|300311015|ref|YP_003775107.1| anaerobic (selenocysteine-conta... 130 4e-31 >gi|300310808|ref|YP_003774900.1| NAD-dependent formate dehydrogenase subunit alpha [Herbaspirillum seropedicae SmR1] Length = 957 Score = 1824 bits (4724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 857/928 (92%), Positives = 897/928 (96%), Gaps = 2/928 (0%) Query: 11 PXGTSVMRAAVEAGINVPKLCATDSLEPFGSCRLCLVEIEGRDGRKMKGYPASCTTPCEP 70 P GTSVMRA+VEAGINVPKLCATDSLEPFGSCRLCLVEIE +DGRKMKGYPASCTTPCEP Sbjct: 32 PAGTSVMRASVEAGINVPKLCATDSLEPFGSCRLCLVEIE-KDGRKMKGYPASCTTPCEP 90 Query: 71 GMKVQTQTPKLADIRRGVMELYISDHPLDCLTCPTNGNCELQDMAGTVGLREVRYGYEGE 130 GMKVQTQTPKLA+IRRGVMELYISDHPLDCLTCPTNGNCELQDMAG VGLREVRYGYEGE Sbjct: 91 GMKVQTQTPKLAEIRRGVMELYISDHPLDCLTCPTNGNCELQDMAGVVGLREVRYGYEGE 150 Query: 131 NHLEMKKDESNPYFTYDPSKCIVCNRCVRACEETQGTFALTISGRGFESRVTAGQMDTFM 190 NH +MKKDESNPYFTYDPSKCIVCNRCVRACEETQGTFALTI+GRGFESRV+AGQM+ FM Sbjct: 151 NHTKMKKDESNPYFTYDPSKCIVCNRCVRACEETQGTFALTINGRGFESRVSAGQMEAFM 210 Query: 191 ESECVSCGACVQACPTATLTEKTVIMMGQAEHSKITTCAYCGVGCAFKAEMKGNEVVRMV 250 ESECVSCGACV+ACPTATLTEKTVIM+GQAEHSK+TTCAYCGVGC+FKAEMKGNEVVRMV Sbjct: 211 ESECVSCGACVEACPTATLTEKTVIMLGQAEHSKVTTCAYCGVGCSFKAEMKGNEVVRMV 270 Query: 251 PYKDGKANHGHSCVKGRFAWGYATHKDRITKPMIRSKITDPWREVSWEEALSYAASEFRR 310 PYKDGKAN GHSCVKGRFAWGYATHKDRI PMIR I DPWREVSWEEALSYAASEFRR Sbjct: 271 PYKDGKANQGHSCVKGRFAWGYATHKDRILNPMIRKSINDPWREVSWEEALSYAASEFRR 330 Query: 311 IQAKHGKDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGE 370 IQAKHGKDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGE Sbjct: 331 IQAKHGKDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGE 390 Query: 371 SAGTQTFDSVMKSDVIMIIGANPASAHPVFASQMKRRLRQGAKLIVIDPRTTEMVKSAHI 430 SAGTQTF+SVMKSDVI+I+GANPA+ HPVFASQ+KRR+RQGAKLIVIDPRTTEMVKS HI Sbjct: 391 SAGTQTFESVMKSDVILIMGANPAAGHPVFASQIKRRVRQGAKLIVIDPRTTEMVKSPHI 450 Query: 431 QADYHLKLRPGTNVAVITALAHVILSEGLQSEEYIKERCDLQSYEQWKEFVLRPDNSPEA 490 QADYHLKLRPGTN A+ITALAHVILSEGLQ E YI+ERCDLQSY+ WKEFVLR DNSPEA Sbjct: 451 QADYHLKLRPGTNTAIITALAHVILSEGLQDEAYIQERCDLQSYQDWKEFVLREDNSPEA 510 Query: 491 MSAICGVPAEELRGAARLFATGGNGAIYYGLGVTEHAQGSTMVIGIANLAMATGNVGREG 550 M+AI GVPAE +RGAARL+ATGGN AIYYGLGVTEHAQGST V+GIANLAM TGNVGREG Sbjct: 511 MAAITGVPAEIIRGAARLYATGGNAAIYYGLGVTEHAQGSTTVMGIANLAMCTGNVGREG 570 Query: 551 VGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDSTVRSQFEQAWGVTLNPEPGLRIPNMF 610 VGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDSTVR+QFEQAWGVTLNPEPGLRIPNMF Sbjct: 571 VGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDSTVRNQFEQAWGVTLNPEPGLRIPNMF 630 Query: 611 DAAMDGSFKGLYCEGEDIVQSDPNTQHVAAALQEMECIVIQDLFLNETAKYAHVFLPGSS 670 DAA+DGSFKGLYCEGEDIVQSDPNTQHVAAALQ MECIV+QDLFLNETAKYAHVFLPGSS Sbjct: 631 DAALDGSFKGLYCEGEDIVQSDPNTQHVAAALQAMECIVVQDLFLNETAKYAHVFLPGSS 690 Query: 671 FLEKDGTFTNAERRISRVRKVMPSKSGKSDWEVTVALAEALGYPMPYNHPSEIMDEIAAL 730 FLEKDGTFTNAERRISRVRKVMP K+GKSDWEVTVALAEALGYPMPYNHPSEIMDEIAAL Sbjct: 691 FLEKDGTFTNAERRISRVRKVMPPKAGKSDWEVTVALAEALGYPMPYNHPSEIMDEIAAL 750 Query: 731 TPSFHGVSYDKLERLGSIQWPCNDAAPEGTPIMHIGSFIRGKGKFLNTQYFATDEKVTQR 790 TPSFHGVSYDKLE+LGSIQWPCN++APEGTPIMH+GSFIRGKGKF+NTQYFATDEKVTQR Sbjct: 751 TPSFHGVSYDKLEKLGSIQWPCNESAPEGTPIMHVGSFIRGKGKFINTQYFATDEKVTQR 810 Query: 791 YPLILTTGRILSQYNVGAQTRRTENSQWHDEDRLEIHPHDAEDRGVREGDWVGIESRAGQ 850 YPLILTTGRILSQYNVGAQTRRTENSQWH EDRLEIHPHDAEDRG+REGDWVG+ESRAGQ Sbjct: 811 YPLILTTGRILSQYNVGAQTRRTENSQWHSEDRLEIHPHDAEDRGIREGDWVGVESRAGQ 870 Query: 851 TVLRATITERVQPGVVYTTFHFPESGANVITTDNSDWATNCPEYKVTAVQVMPVSQPSGW 910 TVLRAT+TE+VQPGVVYTTFHFPESGANVITTDNSDWATNCPEYKVTAVQVMPV+QPS W Sbjct: 871 TVLRATVTEKVQPGVVYTTFHFPESGANVITTDNSDWATNCPEYKVTAVQVMPVTQPSQW 930 Query: 911 QQHYERFNREQLGLLKGEKASQEPLVTK 938 QQHY+RFNREQL LLKG+ A EPLVTK Sbjct: 931 QQHYQRFNREQLDLLKGQ-AQAEPLVTK 957 >gi|300312208|ref|YP_003776300.1| assimilatory nitrate reductase large subunit [Herbaspirillum seropedicae SmR1] Length = 922 Score = 290 bits (743), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 204/713 (28%), Positives = 331/713 (46%), Gaps = 45/713 (6%) Query: 226 TTCAYCGVGCAFKAEMKGNEVVRMVPYKDGKANHGHSCVKGRFAWGYATHKD-RITKPMI 284 TTC YCGVGC A MK + + + AN G CVKG A G D R+ P + Sbjct: 17 TTCPYCGVGCGVSASMKDDGRIGIQGDAQHPANFGRLCVKGS-ALGETVDLDGRLLHPQL 75 Query: 285 RSKITDPWREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQKLVRAAF 344 R ++++W++AL + AS+F I A+HG D++ S + E+ Y+ KL++ Sbjct: 76 RDA-QGQLQQLAWDQALDHVASKFSAIIAEHGPDAVALYVSGQLLTEDYYIANKLMKGYI 134 Query: 345 GNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFDSVMKSDVIMIIGANPASAHPVFASQM 404 G+ N+DT +R+C S G K+ GE ++ + +D+++++G+N A HP+ ++ Sbjct: 135 GSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLVVLVGSNAAWCHPILFQRI 194 Query: 405 KR--RLRQGAKLIVIDPRTTEMVKSAHIQADYHLKLRPGTNVAVITALAHVILSEGLQSE 462 R R +L+VIDPR T + AD HL ++PGT+V + L + GL+ Sbjct: 195 ARLKETRPALRLVVIDPRRTATCE----LADLHLPIKPGTDVWLFNGLMSYLAHRGLRDN 250 Query: 463 EYIKERCDLQSYEQWKEFVLRPDNSPEAMSAICGVPAEELRGAARLFATGGNGAIYYGLG 522 +I+ + +++ P ++ +C + ++L FA + +G Sbjct: 251 AFIEAHT--KGFDEALAVADADCADPATVARLCKIDLKDLLAFYEAFANTEKVVTGFSMG 308 Query: 523 VTEHAQGSTMVIGIANLAMATGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHIS 582 V + + G+ V I N +ATG +G+ G+G + GQ N G ++G + L + + Sbjct: 309 VNQSSAGTDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANMLAAHMDLD 368 Query: 583 DSTVRSQFEQAW-GVTLNPEPGLRIPNMFDAAMDGSFKGLYCEGEDIVQSDPNTQHVAAA 641 R + W + +PGL+ +MF A +G K ++ + + S P+ V A Sbjct: 369 QPLHRQIVQDFWQSPRIADKPGLKAVDMFRAIEEGRIKAVWIMATNPMVSLPDADLVQRA 428 Query: 642 LQEMECIVIQDLFLN-ETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVMPSKS-GKS 699 LQ+ E +V D+ +T AHV LP ++ EKDGT TN+ERRISR R + + + Sbjct: 429 LQKCELVVSSDVITQTDTNALAHVLLPALAWGEKDGTVTNSERRISRQRAFLSAPGEARG 488 Query: 700 DWEVTVALAEALGYP-MPYNHPSEIMDEIAALT------------------PSFHGVSYD 740 DW + +A +G+ + P EI DE A L+ G+ Sbjct: 489 DWRIICDVARRMGFDGFDFAGPHEIFDEHARLSAHRNGEADASRVRRVFNLAGLTGMDRA 548 Query: 741 KLERLGSIQWPC---NDAAPEGTPIM---HIGSFIRGKGKFLNTQYFATDEKVTQRYPLI 794 + L IQWP +D + GT + H S G+ +F+ T + + YPLI Sbjct: 549 AYDALAPIQWPVQRLSDGSVSGTARVLEDHRFSHADGRARFVPTAPRSAAHAACEDYPLI 608 Query: 795 LTTGRILSQYNVGAQTRRTENSQWH-DEDRLEIHPHDAEDRGVREGDWVGIESRAGQTVL 853 L TGR+ ++ +T R+ H E ++IHP DA GVREG I SR G V Sbjct: 609 LNTGRVRDHWHTMTRTGRSATLASHIPESFIDIHPQDALLYGVREGGLARISSRWGAMVA 668 Query: 854 RATITERVQPGVVYTTFHFPESGAN-----VITTDNSDWATNCPEYKVTAVQV 901 R + G V+ H+ A+ + D + PE+K T V + Sbjct: 669 RVQHGGGIARGSVFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVAI 721 >gi|300311101|ref|YP_003775193.1| NADH dehydrogenase I subunit G [Herbaspirillum seropedicae SmR1] Length = 772 Score = 193 bits (490), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 128/407 (31%), Positives = 204/407 (50%), Gaps = 20/407 (4%) Query: 13 GTSVMRAAVEAGINVPKLCATDSLEPFGSCRLCLVEIEGRDGRKMKGYPASCTTPCEPGM 72 G+ VM AA + G +P C L +CR+CLVE+E + K PA C TP GM Sbjct: 16 GSMVMDAANKLGTYIPHFCYHKKLSIAANCRMCLVEVE----KAPKPLPA-CATPVNAGM 70 Query: 73 KVQTQTPKLADIRRGVMELYISDHPLDCLTCPTNGNCELQDMAGTVGLREVRYGYEGENH 132 V+T + K ++GVME + +HPLDC C G C+LQD+A G R Y+ E Sbjct: 71 IVRTASDKAVKAQKGVMEFLLINHPLDCPICDQGGECQLQDLAVGYGGSSSR--YQEEKR 128 Query: 133 LEMKKDESNPYFTYDPSKCIVCNRCVRACEETQGTFALTISGRGFESRVTAGQMDTFMES 192 + KD + ++CI C RCVR +E G L + GRG S +T T ++S Sbjct: 129 VVEPKDVGPLISMKEMNRCIHCTRCVRFGQEVAGVMELGMLGRGEHSEITTFVGKT-VDS 187 Query: 193 ECVSCGACVQACPTATLTEKTVIMMGQA-EHSKITTCA-YCGVGCAFKAEMKGNEVVRMV 250 E G + CP LT K + E S+ + + + VG ++K +V+R++ Sbjct: 188 EL--SGNMIDLCPVGALTSKPFRYSARTWELSRRKSVSPHDSVGANLIVQVKNGKVMRVL 245 Query: 251 PYKDGKANHGHSCVKGRFAWGYATHKDRITKPMIRSKITDPWREVSWEEALSYAASEFRR 310 P+++ + N K RFA+ + R+TKPM++ W+EV W+ AL Y A R Sbjct: 246 PFENEEVNECWISDKDRFAYEALDSEQRLTKPMLKQD--GKWQEVDWQTALEYVAHGLRN 303 Query: 311 IQAKHGKDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGE 370 I+ +HG D+I + + T EE L+QK+VR G+ N+D R + +GL + Sbjct: 304 IRHEHGADAIAALGTPYSTLEELSLLQKIVR-GVGSENIDFRLR----QSDFGLDGQIKP 358 Query: 371 SAGTQTFDSVMKSDVIMIIGANPASAHPVFASQMKRRLRQGAKLIVI 417 G + + + + +IG+ HP+ ++++++ + GAK+ V+ Sbjct: 359 WLGMSIVE-FSQLNRVFVIGSFLRKDHPLLSARLRQSAKSGAKVSVL 404 >gi|300310774|ref|YP_003774866.1| anaerobic formate dehydrogenase [Herbaspirillum seropedicae SmR1] Length = 790 Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 167/688 (24%), Positives = 278/688 (40%), Gaps = 88/688 (12%) Query: 278 RITKPMIRSKITDPWREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQ 337 R+T+PM +D + VSW EA A++ R + K + S R + E +YL Q Sbjct: 132 RVTEPMKYDAASDRYLPVSWSEAFDDIAAQLRAMDPK----KVVFYASGRASLETSYLYQ 187 Query: 338 KLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFDSVMKSDVIMIIGANPASAH 397 + R +G NN+ + +CH T L QT+G GT T D ++D I+ G N + Sbjct: 188 LMARM-YGTNNLPDSSNMCHESTSVALPQTIGVPVGTVTLDDFGQTDCILFFGHNTGTNA 246 Query: 398 PVFASQMKRRLRQGAKLIVIDP-------------RTTEMVKSAHIQ-ADYHLKLRPGTN 443 P ++ ++G +I +P EMV AH + +L+++ G + Sbjct: 247 PRMLHPLEEVRKRGVPVITFNPLRERGLERFVNPQSPKEMVTPAHTDISTQYLQIKIGGD 306 Query: 444 VAVITALAHVILSEGLQS-EEYIKERCDLQSYEQ----WKEFVLRPDNSP-EAMSAICGV 497 A +A IL ++ +E + DL E+ +++F +P + + GV Sbjct: 307 SAAAIGMAKRILERDDKARQEGLPRLLDLAFIEEHTSGFEQFADAVRAAPWDELERHAGV 366 Query: 498 PAEELRGAARLFATGGNGAIYYGLGVTEHAQGSTMVIGIANLAMATGNVGREGVGVNPLR 557 EL AA +A G + YG+GVT+H + + + NL + GN+G+ G G+ P+R Sbjct: 367 SRAELELAADTYAGAGRAMLMYGMGVTQHREAVRTIHMLTNLLLMRGNIGKPGAGICPIR 426 Query: 558 GQNNVQGSCDMGSFPHELPGYRHISDSTVRSQFEQAWGVTLNP--EPGLRIPNMFDAAMD 615 G +NVQG +G E P + + +R+ + P E GL + D Sbjct: 427 GHSNVQGQRTVGI--TEKPEL--VPNDKLRALYH------FEPPMEKGLNTVEACEKIRD 476 Query: 616 GSFKGLYCEGEDIVQSDPNTQHVAAALQEMECIVIQDLFLNET----AKYAHVFLPGSSF 671 G + G + V++ P+ + AA +++ V N + + ++V LP Sbjct: 477 GELSAFFMLGGNFVRAIPDHGVMEAAWRKLPLTVQVVTHFNRSCVIHGQTSYV-LPCLGR 535 Query: 672 LEKDGTFTNAERRI-----------SRVRKVMPSKSGKSDWEVTVALAEALGYPMPYN-- 718 +E D E+ + SR R S S+ + LA+ L +P+N Sbjct: 536 IEIDRQ-RGGEQAVSVEDSTGCMHGSRGRAEPASPHLLSEPAIVAELAKRL---LPFNPQ 591 Query: 719 --------HPSEIMDEIAALTPSFHGVSYDKLERLGSIQWPCNDAAPE---GTPIMHIGS 767 + I D I A P ++ G P AA E TP Sbjct: 592 VDWDGWVGDYARIRDAIEATYPDIFRDFNARMWNPGGFARPL--AARERQWKTP------ 643 Query: 768 FIRGKGKFLNTQYFATDEKVTQRYP--LILTTGRILSQYNVGAQTRRTE-NSQWHDEDRL 824 G+ F+ F D + P L L T R SQ+N + W L Sbjct: 644 --NGRANFMTPDGFDPDPDMPGDAPEVLRLMTTRGDSQFNTTVYSLDDRFRGVWGTRRVL 701 Query: 825 EIHPHDAEDRGVREGDWVGIESRAGQTVLRATITERVQP---GVVYTTFHFPESGANVIT 881 ++ D + G+ GD+V E+ + V R RV+P V +FPE +I Sbjct: 702 LMNLRDLQQHGLAAGDFVCAETVSADGVERRVPHLRVEPFDIPVGCVMGYFPELN-RLIP 760 Query: 882 TDNSDWATNCPEYKVTAVQVMP-VSQPS 908 + + P K ++++P + +PS Sbjct: 761 LFHHARGSKVPAAKSVPIRLIPELREPS 788 >gi|300311015|ref|YP_003775107.1| anaerobic (selenocysteine-containing) formate dehydrogenase [Herbaspirillum seropedicae SmR1] Length = 775 Score = 130 bits (327), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 95/392 (24%), Positives = 176/392 (44%), Gaps = 32/392 (8%) Query: 278 RITKPMIRSKITDPWREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQ 337 R+T PM+ TD ++++ W +A + A + + A D S R +NE +L Q Sbjct: 111 RLTHPMVYDAATDKYKKIEWADAFALMA---KHLNALPDPDMADFYVSGRASNEAAFLFQ 167 Query: 338 KLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFDSVMKSDVIMIIGANPASAH 397 VR +G NN C+ +CH PT GL T+G GT + D +++ G NPA+ H Sbjct: 168 LFVRQ-YGTNNFPDCSNMCHEPTSVGLPGTVGIGKGTVLLEDFDHCDTLLLFGQNPATNH 226 Query: 398 PVFASQMKRRLRQGAKLIVIDP-RTTEMVKSAHIQADYHLKLRPGTNVAVI--------- 447 P +++ ++GA ++ I+P + + + A Q+ + T ++ + Sbjct: 227 PRMMGELRHASKRGATIVAINPLKERGLERFADPQSKVEMLTMGSTRISSMFIHPTLGGD 286 Query: 448 TALAHVILSEGLQSEEYIK----ERC-DLQSYEQ----WKEFVLRPD-NSPEAMSAICGV 497 AL ++ ++ ++ + ER D++ E+ ++EF + S + + A GV Sbjct: 287 LALIKGVIKRTIELDDAARAAGAERVIDVKFIEEHTAGFEEFAAQARAESWDDIVAESGV 346 Query: 498 PAEELRGAARLFATGGNGAIYYGLGVTEHAQGSTMVIGIANLAMATGNVGREGVGVNPLR 557 E++ A+++ G +G+G+T+H + ++N+ M GN+GR+G G+ P+R Sbjct: 347 SREDIEKLAQVYVKGKAVIATWGMGLTQHKHAVATIQLLSNMMMLRGNIGRQGAGLCPVR 406 Query: 558 GQNNVQGSCDMGSFPHELPGYRHISDSTVRSQFEQAWGVTLNPEPGLRIPNMFDAAMDGS 617 G +NVQG +G P + + EQ +G G A ++G Sbjct: 407 GHSNVQGDRTVGIDEKPTPAF--------LDRLEQVFGFKAPRHHGNDTVGSVMAMLEGR 458 Query: 618 FKGLYCEGEDIVQSDPNTQHVAAALQEMECIV 649 K G + + P+T A++ V Sbjct: 459 TKVFIGLGGNFAMATPDTPRTFEAMRSCNLTV 490 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.317 0.133 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,984,395 Number of extensions: 125295 Number of successful extensions: 299 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 277 Number of HSP's successfully gapped: 7 Length of query: 938 Length of database: 1,619,870 Length adjustment: 94 Effective length of query: 844 Effective length of database: 1,174,780 Effective search space: 991514320 Effective search space used: 991514320 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)