BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0018.0008.p
         (226 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312996|ref|YP_003777088.1| 1-acyl-sn-glycerol-3-phosphate ...   248   2e-67

>gi|300312996|ref|YP_003777088.1| 1-acyl-sn-glycerol-3-phosphate
           O-acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 262

 Score =  248 bits (634), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/261 (54%), Positives = 168/261 (64%), Gaps = 52/261 (19%)

Query: 18  LKRLNSLLNKYWRVGGTAISFIAFGVGGIVLRLMIFPLLNLIVRDEQSRILWARRIIRLA 77
           L R+ +L+++ WR+  T + F  FG+GG++LRL++FP+L L+VRD Q R+LWAR IIRLA
Sbjct: 2   LDRVFALIDRGWRILATGMCFALFGLGGLLLRLVVFPILQLLVRDAQQRVLWARHIIRLA 61

Query: 78  FRAFVELMSALGVLSYRISGRERLQRKGLLILANHPSLIDTVLLMAFVEQADCIVKSALW 137
           FRAFVELM   GV+ Y ISG ERL R G LILANHP+LIDTVLLMAFV  ADCIVK+ALW
Sbjct: 62  FRAFVELMRICGVIRYEISGLERLNRNGQLILANHPTLIDTVLLMAFVRHADCIVKNALW 121

Query: 138 RNPFTRGPVRAAGYISNAHGPELVDDCISSMRSGGNLIIFPEGTRTPADGN--------- 188
           RNPFTRGP+RAAGYISN  GP+L++DCI S+RSGGNLIIFPEGTRTP DG          
Sbjct: 122 RNPFTRGPIRAAGYISNDQGPDLIEDCIRSIRSGGNLIIFPEGTRTPTDGQISLKRGAAN 181

Query: 189 --------MXDIDIRDIP-----------------------------------GVTGDAC 205
                   +  + IR  P                                   G    A 
Sbjct: 182 VAVRCGCPITPVRIRCTPVTLSKGEKWWQVPARRAHFRLQIGDDLHLDHIIGAGQPHPAD 241

Query: 206 NPTLAARQLTYYLQNYFMKES 226
           NPTLAARQLT YLQ YFMKE+
Sbjct: 242 NPTLAARQLTTYLQQYFMKEN 262


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.326    0.141    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 657,718
Number of extensions: 24178
Number of successful extensions: 100
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 100
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 1,619,870
Length adjustment: 82
Effective length of query: 144
Effective length of database: 1,231,600
Effective search space: 177350400
Effective search space used: 177350400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 129 (54.3 bits)