BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0077.p
         (225 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311179|ref|YP_003775271.1| carboxylesterase [Herbaspirillu...   378   e-106

>gi|300311179|ref|YP_003775271.1| carboxylesterase [Herbaspirillum
           seropedicae SmR1]
          Length = 222

 Score =  378 bits (970), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/219 (81%), Positives = 196/219 (89%)

Query: 5   APLQTIEIESAPNPTAAVIWLHGLGADGNDFVPIVRELDLSGSQAIRFIFPTAPTMPVTI 64
           APL TI+I++APNPTA+VIWLHGLGADG+DFVPIVRELDLS    IRFIFPTAPTMPVTI
Sbjct: 3   APLDTIQIDTAPNPTASVIWLHGLGADGSDFVPIVRELDLSACPPIRFIFPTAPTMPVTI 62

Query: 65  NGGYVMRAWYDIFTPDLVRREDEPGLRASQALVEALIAREKARGIPAERIVLAGFSQGCA 124
           NGGYVMRAWYDIF PDLVRREDEPGLRASQA +EALIA+EKARG+PA RIVLAGFSQGCA
Sbjct: 63  NGGYVMRAWYDIFAPDLVRREDEPGLRASQAAIEALIAQEKARGVPANRIVLAGFSQGCA 122

Query: 125 MTLQTGLRHPEKLAGLMCLSGYLPLAAMIEAERRTANHATPVFMAHGRQDPVVVIARAEQ 184
           MTLQTGLRHPE+LAGLMCLSGYLPLAA IEAER  ANH TP+FMAHG  DPVVV+ RA +
Sbjct: 123 MTLQTGLRHPERLAGLMCLSGYLPLAATIEAERHAANHDTPIFMAHGTMDPVVVLERAVK 182

Query: 185 SRDMLKALGHDIEWHEYQMQHSVCQEEVDDIGQWLARVL 223
           SR++L  LGH +EWH+Y MQHSVC EEV+DIG WL RVL
Sbjct: 183 SRELLTQLGHPVEWHDYPMQHSVCGEEVEDIGAWLTRVL 221


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 789,086
Number of extensions: 33473
Number of successful extensions: 100
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 100
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 1,619,870
Length adjustment: 82
Effective length of query: 143
Effective length of database: 1,231,600
Effective search space: 176118800
Effective search space used: 176118800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)