BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0181.p
         (200 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313410|ref|YP_003777502.1| carbonic anhydrase/acetyltransf...   249   1e-67
gi|300311056|ref|YP_003775148.1| carbonic anhydrase/acetyltransf...   113   1e-26
gi|300312547|ref|YP_003776639.1| isoleucine patch superfamily ca...    62   4e-11

>gi|300313410|ref|YP_003777502.1| carbonic
           anhydrase/acetyltransferase [Herbaspirillum seropedicae
           SmR1]
          Length = 200

 Score =  249 bits (635), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 111/186 (59%), Positives = 147/186 (79%)

Query: 2   LQVYSIDGITPVVHPTAYVHPSAVLIGDVVVGPRCYIGPLASLRGDFGRIIINEGANIQD 61
           +  YSI+G+ PVV P+AYVHP+AVLIGDV+VGP CY+GP A LRGDFGRI++  GAN+QD
Sbjct: 1   MPCYSIEGVIPVVDPSAYVHPTAVLIGDVIVGPDCYVGPTACLRGDFGRIVLQRGANVQD 60

Query: 62  TCVLHGFYESDTVVDVDGHIGHGAILHGCKIERDALVGMNAIVMDDAVIGESSIVGAAAF 121
           TCV+HGF   DTVV+ +GHIGHGA+LH C + RDALVGMNA+VMD+AV+GE +IV A AF
Sbjct: 61  TCVIHGFPGHDTVVEENGHIGHGAVLHSCTVRRDALVGMNAVVMDEAVVGEQAIVAACAF 120

Query: 122 VKAGMIVPARSLVIGTPAKVVRDLREEEILWKRQGTSQYHELSVRSATTMKAVNALTEVE 181
           V+AGM +P R+L  G PAKVVR+L  +E+ WK+ GT  Y +L+VR   +++ V+ L+++E
Sbjct: 121 VRAGMQIPPRTLAAGLPAKVVRELTADEMAWKQAGTRTYQDLTVRCLASLREVSPLSQIE 180

Query: 182 ADRKRL 187
            +R  L
Sbjct: 181 ENRPAL 186


>gi|300311056|ref|YP_003775148.1| carbonic
           anhydrase/acetyltransferase [Herbaspirillum seropedicae
           SmR1]
          Length = 174

 Score =  113 bits (283), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 4/172 (2%)

Query: 2   LQVYSIDGITPVVHPTAYVHPSAVLIGDVVVGPRCYIGPLASLRGDFGRIIINEGANIQD 61
           + +Y ++   P +H TA+V  S+ ++G V +     +    ++RGD   I I E +N+Q+
Sbjct: 1   MAIYQLEQDIPEIHDTAFVAESSTVVGKVKMEAHSSVWFNVAIRGDNELITIGENSNVQE 60

Query: 62  TCVLHGFYESDTVVDVDGHIGHGAILHGCKIERDALVGMNAIVMDDAVIGESSIVGAAAF 121
             VLH       V+  +  +GH A+LHGC I   AL+G+ A+V++ A IG++ +VGA A 
Sbjct: 61  GAVLHTDVGYPMVIGKNVTVGHQAMLHGCTIGEGALIGIQAVVLNGAKIGKNCLVGAGAL 120

Query: 122 VKAGMIVPARSLVIGTPAKVVRDLREEEILWKRQGTSQYHELSVRSATTMKA 173
           V  G   P  SL+IG PAK VR L EE+I   R GT  Y    V+ A   KA
Sbjct: 121 VTEGKEFPDNSLIIGAPAKAVRQLSEEDIARMRAGTDSY----VQRAQQFKA 168


>gi|300312547|ref|YP_003776639.1| isoleucine patch superfamily
           carbonic anhydrase/acetyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 186

 Score = 61.6 bits (148), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 14/135 (10%)

Query: 9   GITPVVHPTAYVHPSAVLIGDVVVGPRCYIGPLASLR-------GDFGRIIINEGANIQD 61
           G  P VH +AYV  +A+L G V+V    +IGP A +R       G+   III   +NIQD
Sbjct: 8   GHRPQVHESAYVDHTAILCGKVIVHENVFIGPYAVIRADEVDEHGEMEPIIIGAHSNIQD 67

Query: 62  TCVLHGFYESDTVVDVDGHIGHGAILHG-CKIERDALVGMNAIVMDDAVIGESSIVGAAA 120
             V+H    +   +     I H AI+HG C +  DA +G N+++  +  IG   +V   A
Sbjct: 68  GVVIHSKSGAAVTIGERTSIAHRAIVHGPCTVGDDAFIGFNSVLF-NCSIGAGCVVRHNA 126

Query: 121 FVKA-----GMIVPA 130
            V       G  VP+
Sbjct: 127 VVDGCDLPPGFYVPS 141


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 621,644
Number of extensions: 25585
Number of successful extensions: 116
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 3
Length of query: 200
Length of database: 1,619,870
Length adjustment: 81
Effective length of query: 119
Effective length of database: 1,236,335
Effective search space: 147123865
Effective search space used: 147123865
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)