BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0138.p
         (453 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313232|ref|YP_003777324.1| 3-(3-hydroxyphenyl) propionate ...    92   8e-20
gi|300309878|ref|YP_003773970.1| 2-polyprenyl-6-methoxyphenol hy...    89   8e-19

>gi|300313232|ref|YP_003777324.1| 3-(3-hydroxyphenyl) propionate
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 544

 Score = 92.0 bits (227), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 14/215 (6%)

Query: 75  SDSELIDLRQDAEGVTILVRSSAGEEKEIRARYVVGADGGRSAVRTK-LGLDFEGHSGTF 133
           S  EL+DL QD  GV   +    G +  +RA+YVVG DGGRS VR K L L +EG +   
Sbjct: 138 SGVELLDLVQDEAGVQASIIDEHGAQATLRAQYVVGCDGGRSTVREKILKLPYEGKTHPA 197

Query: 134 RGIVVDAH---LEAPWPGGRINVDNEMGWIRGYTFGEGITRFNIVHRDRRHAPKEEPVEL 190
           + +V++     L+AP+    ++ + +  ++       G+ R+  +       P E+  ++
Sbjct: 198 KWVVIECDGDPLDAPYTA--LHCEPQRPYV-CLALPYGVRRWEFML-----FPGEDGEQM 249

Query: 191 --PEVLQCLQDVHGTDYGITSYRWASRFDDQMRSVKKLRQGRVFLVGESARIHYPASGVG 248
             PE ++ L   H  D    +   A  +    R    L  GR+ L G++A I  P  G G
Sbjct: 250 LAPEKVRELLREHVRDVDALNIIRARVYTHNSRVAGSLVCGRICLAGDAAHITPPWIGQG 309

Query: 249 MNFCLQDAFNLGWKLANVVKGHASDETLDTYESER 283
           +N  L+DAFNL WKLA V++G    E L +Y  ER
Sbjct: 310 LNAGLRDAFNLAWKLAWVLQGRMKPELLASYHEER 344


>gi|300309878|ref|YP_003773970.1| 2-polyprenyl-6-methoxyphenol
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 589

 Score = 89.0 bits (219), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 25/194 (12%)

Query: 103 IRARYVVGADGGRSAVRTKLGLDFEGHSGTFRGIVVDAHLEAPWPGGRINVDNEMGWIRG 162
           ++ARYVV ADG RS +R  +GL+ +GH+   R ++ D  ++AP+P  R        W   
Sbjct: 179 LKARYVVAADGSRSPLRKMMGLESQGHTFRDRFLIADVKMDAPFPAER--------W--- 227

Query: 163 YTFGEGI--TRFNIVHR--------DRRHAPKEEPV--ELPE-VLQCLQDVHGTDYGITS 209
           + F       +  ++HR        D +     +PV  + PE V+  ++ + G +    S
Sbjct: 228 FWFDPPFHPQQSVLLHRQPDDVWRIDFQLGWDADPVLEKTPERVIPRVRALLGEEVSF-S 286

Query: 210 YRWASRFDDQMRSVKKLRQGRVFLVGESARIHYPASGVGMNFCLQDAFNLGWKLANVVKG 269
             W S +      +++ R GRV  VG++A    P    G N  +QDA NL WKLA+V++G
Sbjct: 287 LEWVSVYTFSCVRMERFRHGRVLFVGDAAHCVSPFGARGANSGIQDAENLAWKLAHVLQG 346

Query: 270 HASDETLDTYESER 283
            A D  LD+Y SER
Sbjct: 347 KAPDSLLDSYASER 360


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.138    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,437,384
Number of extensions: 59749
Number of successful extensions: 166
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 165
Number of HSP's successfully gapped: 2
Length of query: 453
Length of database: 1,619,870
Length adjustment: 88
Effective length of query: 365
Effective length of database: 1,203,190
Effective search space: 439164350
Effective search space used: 439164350
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 132 (55.5 bits)