BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0022.p
         (167 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313844|ref|YP_003777936.1| sortase/acetyltransferase [Herb...    84   8e-18
gi|300312416|ref|YP_003776508.1| phosphinothricin N-acetyltransf...    69   1e-13

>gi|300313844|ref|YP_003777936.1| sortase/acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 173

 Score = 83.6 bits (205), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 76/155 (49%)

Query: 8   RLARPQDLDAIVAIYNSTVASRQVTADTEPVSVASRQAWFDEHTADKRPLWVAERDGEVI 67
           R A   D+  I  IYN  VA+     +   V   +R+ W         P+ VA  DG+V+
Sbjct: 4   RDAELADIAGITPIYNDAVANTTAIWNETLVDDRNREDWLTARRQSGYPVLVAVADGKVL 63

Query: 68  GWLSYSNFYGRPAYAGTAELSVYLHEKARGQGLGRYFLEQAIAFAPSIKVHTLLGFVFGH 127
           G+ S+ ++     Y  T E SVY+H+  RG+GLGR  +E  IA A ++  H ++  +   
Sbjct: 64  GYASFGDWRAFDGYRHTVEHSVYVHKDHRGEGLGRALMEALIARARALGKHVMVAGIDAS 123

Query: 128 NEPSLKLFEAFSFERWANMPRVATLDGVERDLVIL 162
           N  S+ L +   FE+   +P+V T  G   DL  L
Sbjct: 124 NSGSINLHKKLGFEQVGYLPQVGTKFGKWLDLAFL 158


>gi|300312416|ref|YP_003776508.1| phosphinothricin
           N-acetyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 167

 Score = 69.3 bits (168), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 1/133 (0%)

Query: 8   RLARPQDLDAIVAIYNSTVASRQVTADTEPVSVASRQAWFDEHTADKRPLWVAERDGEVI 67
           R A   D  A+  IYN  VA+  ++ +TEPVS  S  A   E  A K P  V E +G+V+
Sbjct: 6   RPATAADAPALCGIYNHYVATTAISFETEPVSEESMVARIAEVQA-KFPWLVYEEEGQVL 64

Query: 68  GWLSYSNFYGRPAYAGTAELSVYLHEKARGQGLGRYFLEQAIAFAPSIKVHTLLGFVFGH 127
           G+   + +  R AY  + E SVYL   A G+G+G+    Q  A    + +H ++G +   
Sbjct: 65  GYAYATQWKPRAAYRQSVESSVYLRHDAGGRGIGKRLYRQLFAELKPLGIHLVIGGIAQP 124

Query: 128 NEPSLKLFEAFSF 140
           N  S+ L E+  F
Sbjct: 125 NAASVALHESLGF 137


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.134    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 547,877
Number of extensions: 22468
Number of successful extensions: 61
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 60
Number of HSP's successfully gapped: 2
Length of query: 167
Length of database: 1,619,870
Length adjustment: 79
Effective length of query: 88
Effective length of database: 1,245,805
Effective search space: 109630840
Effective search space used: 109630840
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)