BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0267.p
         (178 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309659|ref|YP_003773751.1| esterase-lipase superfamily pro...   234   2e-63
gi|300311178|ref|YP_003775270.1| lipase [Herbaspirillum seropedi...    71   7e-14

>gi|300309659|ref|YP_003773751.1| esterase-lipase superfamily
           protein [Herbaspirillum seropedicae SmR1]
          Length = 332

 Score =  234 bits (598), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 123/168 (73%), Positives = 136/168 (80%), Gaps = 4/168 (2%)

Query: 15  GNDAGGNLAASLTMITRDRCSAPFVAQVLISPMLDPSMTLLGDAKRLNSDMTAEACALRY 74
           G+DAGG LAASLT++TRDRC  P  AQVLISPMLDPSM LLGDA RL SD+TAE CA  Y
Sbjct: 162 GDDAGGCLAASLTLMTRDRCGKPLAAQVLISPMLDPSMRLLGDAARLQSDLTAETCAASY 221

Query: 75  RQYLPQTMQRLHPYAAPLEASRLAGLPPAYIATAGCDVLHTEAEKYAASLIHAGVHTQVA 134
           RQYLPQTMQRLHPYAAPLE SRLAGLPPA+IATA  DVL  EAEKYA+SLI AGV TQV+
Sbjct: 222 RQYLPQTMQRLHPYAAPLEVSRLAGLPPAFIATAERDVLCPEAEKYASSLIRAGVPTQVS 281

Query: 135 RFAGITHDALRSHIPLLKEIVEFLRRRFSAIAGPT-NPAF---QFQPS 178
           RFAGITH ALR+H+PLL EIV FLR RF+ + G   +P F   + QPS
Sbjct: 282 RFAGITHAALRTHLPLLTEIVNFLRCRFAKLQGHAPHPEFLPNKLQPS 329


>gi|300311178|ref|YP_003775270.1| lipase [Herbaspirillum seropedicae
           SmR1]
          Length = 340

 Score = 70.9 bits (172), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 3/131 (2%)

Query: 15  GNDAGGNLAASLTMITRDRCSAPFVAQVLISPMLDPSMTLLGDAKRLNSD-MTAEACALR 73
           GN  GGN+AA + ++ +D+      ++VL+ P+ D +       +  N   +T       
Sbjct: 181 GNSVGGNMAAVVALMAKDKGGPALRSEVLLWPVTDANFETASYNQFANGYFLTKNMMKWF 240

Query: 74  YRQYLPQTMQRLHPYAAPLEAS--RLAGLPPAYIATAGCDVLHTEAEKYAASLIHAGVHT 131
           +  Y     +R    A+PL A+  +L+GLPP  I TA  DVL  E E+Y   L  AGV  
Sbjct: 241 WDSYTTDAAKRKEITASPLNATPAQLSGLPPTLIQTAEKDVLRDEGEEYGRKLAAAGVAV 300

Query: 132 QVARFAGITHD 142
              R+ G+ HD
Sbjct: 301 TSVRYNGMIHD 311


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 539,405
Number of extensions: 20435
Number of successful extensions: 59
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 58
Number of HSP's successfully gapped: 2
Length of query: 178
Length of database: 1,619,870
Length adjustment: 79
Effective length of query: 99
Effective length of database: 1,245,805
Effective search space: 123334695
Effective search space used: 123334695
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 127 (53.5 bits)