BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0227.p (728 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore rece... 300 3e-82 gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore rece... 206 4e-54 gi|300309379|ref|YP_003773471.1| TonB-dependent ferric sideropho... 168 2e-42 gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 155 8e-39 gi|300309869|ref|YP_003773961.1| TonB-dependent ferric sideropho... 153 5e-38 >gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 723 Score = 300 bits (768), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 233/702 (33%), Positives = 334/702 (47%), Gaps = 48/702 (6%) Query: 58 EKLPEVSVSGARPSLYATDGVNVGALGYKKPEELPFSVQSYSSELIDAQESRTMMDVLKN 117 + LP ++V+ + + +V + P SV +S + Q+SR + DV+KN Sbjct: 39 QSLPTINVTASGATGTQARSASVAGFDDAPLLDTPASVSVVTSAQMKDQQSRLLSDVVKN 98 Query: 118 DPSV-QDATQAGAYEMVRIRGYFSDWTNTVRRDGMSVAPYYEIPLENVEQIDLLKGPSGF 176 D S+ ++ G YE IRG+ D + R +G++VA I LEN E+++ LKG +G Sbjct: 99 DASINENYAPVGYYENFSIRGFTLDPASAYRVNGLTVAGEQTIALENKERVEFLKGVAGL 158 Query: 177 LYGINSPGGTINYAIKRPTRDRFTSIKTSLRSDSGGGTYVALDTGGPLDDGR-FGYRFNV 235 G+ + GG +NY KRP R ++ T DS G Y+A D G + + FG R N Sbjct: 159 QAGVVAAGGLVNYVTKRPANVRSITLGT----DSNGSRYLATDLGALFGEHKQFGLRINA 214 Query: 236 ARERNGDFHHNGDTSRDFVSGAFDWAINPDLLVRANFDYQERKISAQPSIGPY--LNGQL 293 A E + NGD RDF S + WAI+ LV+ + +YQ++ AQ S+ Y L G Sbjct: 215 AHEDIHSYVSNGDGWRDFASLSATWAISARTLVQFDAEYQQK---AQRSVAGYQLLGGAT 271 Query: 294 PPVSSIDPRTLLG-QPWLQYETRTFNIGADLQY--RINDKWKLTTRAAQSYNGRVAAFPD 350 P S + P T+L QPW Q R ++ A L+ N W+ +A GR A D Sbjct: 272 LP-SGVSPSTMLTPQPWSQ-PVRDSSVNARLRIDTEFNADWRGYVQA-----GRSRAVID 324 Query: 351 VY-------------NVAANGNILSGDIYYNPNQSFRVISTDSYVSGDVETIGIRHQLVT 397 Y AANG+ D Y PN R + G + ++H+L Sbjct: 325 DYLAFPYGSGNGASPTFAANGDFDVYD-YRVPNDERRNDEVQAVAIGKFASGWVQHELTL 383 Query: 398 GFS-TRNFQAVESGFKVLPDTVGNIYN--PVFTSAPSNLTYPNHNKSKNYQPSVFISDLM 454 G + +R G VL GNIYN PV +A + + N Q ++F SD M Sbjct: 384 GMAMSRRIVDKSDGISVLVGQ-GNIYNGTPVLPAANAVIPAAYRNLDSR-QKALFFSDRM 441 Query: 455 SLSDRWDVMLGLRHVRYKNDSMPASGRNTSQTA-SINAPSAAVTFKIVPELSTYVSYAEG 513 S RW V+ G R V S ++G T T+ ++ P A+ FK V LS Y SYAE Sbjct: 442 QFSQRWQVLAGGRQVWLNEQSFNSTGAVTRDTSRNLFLPQLALIFKPVQNLSLYGSYAET 501 Query: 514 FEQPGPAGYDTNNAGENLPPLQTRQYEAGVKYGLNPDLMLTGAVFRLEKTLQYVN----- 568 A + +N LPP RQ EAGVKY +P+L LT AVFR K +Y Sbjct: 502 LSLGSSAPFWVSNFPVTLPPSVARQLEAGVKYEFSPELALTAAVFRTRKAYEYQKPDNSP 561 Query: 569 AGRFTVQGGMQRHSGLELTANGRLSKRLSIVAGLAYLQTKADNPADPAIAGKQIADVPKL 628 G VQ G Q ++G+EL ANG+L+ RL+I A L+ +A + +Q+ +VP+L Sbjct: 562 TGFTYVQQGQQTNTGVELGANGKLTPRLAIGAAATVLRARASDTGTARFDDQQVVNVPRL 621 Query: 629 QGNVFVDYRVPGIDGLNVNGGMYYVGRRPLNTQNTAWMGGYTRFDTGARYVTRIGGYKTT 688 + V+ DY VPG++G+NV G Y +P + + F+ G RY R+ G+ T Sbjct: 622 RTAVYADYAVPGMEGVNVMGSWNYSASKPATRDGSVNLPAVHVFNAGLRYQLRVNGHAAT 681 Query: 689 FGLTVQNLLDKRYWAAGDADINGAWA--GKPRTMFLSAQVDL 728 + NL DKRYW + + G PRT LS Q D Sbjct: 682 LRANIDNLFDKRYWKDAGQYLGDGYVHLGAPRTARLSLQYDF 723 >gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 733 Score = 206 bits (525), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 205/692 (29%), Positives = 308/692 (44%), Gaps = 70/692 (10%) Query: 77 GVNVGALGYKKPEELPFSVQSYSSELIDAQESRTMMDVLKNDPSVQDATQAGAY-EMVRI 135 G +G LG + P +Y+ +LI Q++ + DVLKNDP V+ G + E I Sbjct: 68 GSRLGVLGNVDNLDSPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQESYMI 127 Query: 136 RGYFSDWTNTVRRDGMSVAPYYEIPLENVEQIDLLKGPSGFLYGIN----SPGGTINYAI 191 RG+ ++ + + + P + E +E++++ G S FL G GGTIN Sbjct: 128 RGFIANSDDLMYNGLFGILPRQYVASEMMERVEVQYGASAFLNGATPGDAGLGGTINIVP 187 Query: 192 KRPTRDRFTSIKTSLRSDSGGGTYVALDTG---GPLDDGRFGYRFNVARERNGDFHHNGD 248 KR + T + +L +SG Y ALD GP + R G R N AR G N Sbjct: 188 KRAANEPLTDL--TLGYESGNSQYAALDVSRRFGPQE--RLGVRINAARHAGGTGVANER 243 Query: 249 TSRDFVSGAFDWAINPDLLVRANFDYQERKIS-AQPS--IGPYLNGQLPPVSSIDPRTLL 305 + S D+ N D + A+ QE +S +PS IG L LP S Sbjct: 244 RETNLFSLGVDYRGN-DFRLSADLGLQENNLSNVRPSVTIGAGLT-SLPVAPSGSAN--Y 299 Query: 306 GQPWLQYETRTFNIGADLQYRINDKWKLT--TRAAQSYNGRVAAFPDVYNVAANGNILSG 363 GQPW +++ DL + +W L+ T A ++ R N LSG Sbjct: 300 GQPW------SYSNARDLFGTVRGEWDLSSSTTAWAAFGARQGT---------ENNSLSG 344 Query: 364 DIYYNPNQ----SFRVISTDSYVSGDVET--IGIRHQLVTGFSTRNFQAVESGFKVLPDT 417 N + ++R D+ DV T +G+R L TG + A S + + Sbjct: 345 VRVTNASTGAAATYRF---DNARQDDVATGEVGVRTHLQTGAVSHKLVAAASAYSLNSRN 401 Query: 418 V----------GNIYNPV------FTSAPSNLTYPNHNKSKNYQPSVFISDLMSLSDRWD 461 N+YNP TS ++L P N +V L DR Sbjct: 402 AYGLSPSYALATNLYNPTNYAQPALTSLGNSLADPQTTIKTNLLSAVVSDTLGFYDDRVL 461 Query: 462 VMLGLRHVRYKNDSMPASGR-NTSQ-TASINAPSAAVTFKIVPELSTYVSYAEGFEQPGP 519 V +G+R + K+D+ + + NT+ S +P A V FK+ LS Y +Y EG +Q G Sbjct: 462 VTVGVRQQQLKSDTYAYNTQANTAHYDQSATSPMAGVVFKLTKTLSVYGNYIEGLQQ-GK 520 Query: 520 AGYDTN--NAGENLPPLQTRQYEAGVKYGLNPDLMLTGAVFRLEKTLQYVNA-GRFTVQG 576 DT N G+ L P +++Q E GVKY L L L A F ++ L Y +A Sbjct: 521 QITDTTAANYGQVLAPYKSKQKEVGVKYELG-GLGLGAAFFTTDRPLSYKDAVTNIEATN 579 Query: 577 GMQRHSGLELTANGRLSKRLSIVAGLAYLQTKADNPADPAIAGKQIADVPKLQGNVFVDY 636 G QR+ G+ELTA G ++K + +++GL +L K A GK VP++Q N ++ Sbjct: 580 GKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQVQTNSSANNGKYAIGVPRVQANAGLEV 639 Query: 637 RVPGIDGLNVNGGMYYVGRRPLNTQNTAWMGGYTRFDTGARYVTRIGGYKTTFGLTVQNL 696 VPG+ GL +NG Y + ++ N + + R+D GARY+T IGG+ T ++ N+ Sbjct: 640 DVPGVRGLTLNGRATYTSTQYVDAANQLEVPSWVRYDLGARYLTDIGGHAVTLRASIDNV 699 Query: 697 LDKRYWAAGDADINGAW--AGKPRTMFLSAQV 726 ++ YW + N + AG PRT S V Sbjct: 700 ANRNYWQSAGGASNSGYLVAGNPRTFSTSVSV 731 >gi|300309379|ref|YP_003773471.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 790 Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 191/747 (25%), Positives = 313/747 (41%), Gaps = 82/747 (10%) Query: 26 EALQRLLDHSGLEVRPTAAGGYAITGGKSAAAEKLPEVSVSGARPS-----LYATDGVNV 80 + L LL +GL+ A G Y + + A+ LP V++ A + Y G + Sbjct: 80 QGLAALLAGTGLQAIRQANGSYLLKPVDTLASAPLPAVTIRAAADTSAYAGAYLARGGAL 139 Query: 81 GALGYKKPEELPFSVQSYSSELIDAQESRTMMDVLKNDPSVQDATQAGAY-EMVRIRGYF 139 G LG + ++P + +Y++EL+ Q++RT+ D + ND S++ T G + E +IRGY Sbjct: 140 GVLGNRAVMDIPLATLNYTNELLQDQQARTVADAVLNDASIRMLTSTGGFGETYQIRGYG 199 Query: 140 SDWTNTVRRDGMSVAPYYEIPLENVEQIDLLKGPSGFLYGIN---SPGGTINYAIKRPTR 196 + +A +P +E++D+LKGP L+GI+ S GG+IN KR Sbjct: 200 LTSGDVGVNGLFGLASGNRMPAVMIERVDVLKGPGTLLHGISPEGSIGGSINLVTKRAED 259 Query: 197 DRFTSIKTSLRSDSGGGTYVALDTGGPLDDGRFGYRFNVARERNGDFHHNGDT------- 249 + T + +S G V L D +G RFN R G Sbjct: 260 EPLTRLTALYQSRRQPGVQVDLGRRFGTQDA-WGIRFNTVLRRGEASIAGGRQDAGAGAL 318 Query: 250 SRDFVSGAFDWAINPDLLVRANFDYQERKISA--QPSIGPYLNG----QLPPVSSIDPRT 303 + D+ + W+++ Y++R+ S+ +P +G +L G PP +D Sbjct: 319 ALDYRGRGWRWSLDA---------YRQRENSSDFRPQVG-FLPGVTALPAPPSGDLD--- 365 Query: 304 LLGQPWLQYETRTFNIGADLQYRINDKWKLTTRAAQSYNGRVAAFPDV--YNVAANGNIL 361 F G L ++ + L TR + +++A+ V A N+ Sbjct: 366 -------------FFSGNQLSFQDD---ALLTRVEVELSEQLSAYAAVGQRRSATQQNLP 409 Query: 362 SGDI-----------YYNPNQSFRVISTDSYVSGDVETIGIRHQLVTGFSTRNFQAVESG 410 +G + YY + + R +S D+ + T +RH + G TR Q + Sbjct: 410 TGSVDASGAGSVRNAYY--DTASRTLSADAGLRLQAATGAVRHGVSLGV-TRLRQQAGNA 466 Query: 411 FKVLPDTVG-NIYNPVFTSAPSNL-TYPNHNKSKNYQPSVFISDLMSLSDRWDVMLGLRH 468 + V D+ ++Y P S T P L L DR +++G R Sbjct: 467 YLVSADSSAYSLYAPATLPVISAARTEPRKAYDMTLDSLSLTDTLRLLEDRLQLLVGARR 526 Query: 469 --VRYKNDSMPASGRNTSQTASINAPSAAVTFKIVPELSTYVSYAEGFEQPGPAGYDTNN 526 VRY + + + +S AS +P + K V LS Y + G + N Sbjct: 527 QSVRYDSFDTVSGAQLSSYEASAISPLLGLVVKPVAGLSLYANTTSGLTRGTIVPTGLAN 586 Query: 527 AGENLPPLQTRQYEAGVKYGLNPDLMLTGAVFRLEKTLQYVNAGRFTVQG------GMQR 580 AG+ L P ++RQ EAG K +M A F+++ + T G QR Sbjct: 587 AGQVLAPYRSRQLEAGAKLDWG-RVMTQAAWFQIDNPSAVITTQASTPASSSYGYDGRQR 645 Query: 581 HSGLELTANGRLSKRLSIVAGLAYLQTKADNPADPAIAGKQIADVPKLQGNVFVDYRVPG 640 + GLEL+A G L + L ++A + Q + A+ G+ VP N+ +D+ G Sbjct: 646 NRGLELSAYGELMRGLRLLASATFYQARLLRTANGLNDGRTAPGVPLRAANLSLDWEPAG 705 Query: 641 IDGLNVNGGMYYVGRRPLNTQNTAWMGGYTRFDTGARYVTRIGGYKTTFGLTVQNLLDKR 700 + GL +G M + G + NT + +TR+D G RY +R+G + L V+NL + Sbjct: 706 LPGLAFSGRMIHTGPVYYDAANTLRLPSWTRWDLGVRYRSRLGERPVVWRLNVENLFNHS 765 Query: 701 YWAAGDADINGAWAGKPRTMFLSAQVD 727 W + A PRT+ LS QVD Sbjct: 766 TWLLDKPYVTVA---APRTVLLSMQVD 789 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 155 bits (393), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 171/643 (26%), Positives = 275/643 (42%), Gaps = 53/643 (8%) Query: 89 EELPFSVQSYSSELIDAQESRTMMDVLKNDPSVQDATQ-AGAYEMVRIRGYFSDWTN--- 144 +ELP SVQ S +LID + + DVL V G ++ IRG FS N Sbjct: 66 QELPQSVQVVSRQLIDDLAATRLDDVLLYVSGVARQNNFGGLWDNYSIRG-FSGSENGGM 124 Query: 145 TVRRDGMSVAPYYEIP--LENVEQIDLLKGPSGFLYGINSPGGTINYAIKRPTRDRFTSI 202 + +G + Y P + NVE +D LKGP+ LYG + PGGTIN K+P ++ Sbjct: 125 NILWNGFASNRGYAPPRDMANVESVDFLKGPAAALYGNSEPGGTINVVTKKPQFKSANAL 184 Query: 203 KTSLRSDSGGGTYVALDTGGPLDDGRFGYRFNVARERNGDFHHNGDTSRDFVSGAFDWAI 262 S+ S+ + A+D+ G L YR N A E G + R+F + AF W + Sbjct: 185 DLSIGSNDAYRS--AVDSTGALSS-TVAYRLNAAMEHKGSMRDQVRSEREFFAPAFTWLL 241 Query: 263 NPDLLVRANFDYQERKISAQPSIGPYLNGQ--LPPVSSIDPRTLLGQPWL-QYETRTFNI 319 + ++ ++ +K I +NG + PVS LG+P + + N Sbjct: 242 TENTILNYEGEFLRQKAPLDRGI-VAVNGNAGVLPVSR-----FLGEPNDGDIKMQNQNH 295 Query: 320 GADLQYRINDKWKLTTRAAQSYNGRVAAFPDVYNVAANGNILSGDIYYNPNQSFRVISTD 379 L+ R+N+ W L T + + + A+ L Y + S+ S Sbjct: 296 LLTLEQRLNENWHLRTGIFHKEGSLDGYSTEAFALQADNATLRRQRRYR-DYSWHDTSLQ 354 Query: 380 SYVSGDVETIGIRHQLVTGFSTRNFQAVESGFKVLPDTVG----NIYNPVFTSAPSNLTY 435 + + G T G+ H+++ G + ++ P V NIYNPV+ A T Sbjct: 355 AEIGGKFATAGVGHEVLVGTEVDWLTLDQRMLRINPSNVAPYAVNIYNPVYGQAQPTPTA 414 Query: 436 PNHNKSKNYQPSVFISDLMSLSDRWDVMLGLRHVRYKND-SMPASGRNTSQTASINAPSA 494 + +++ D +SLS+RW ++ G+R +++ + +G T Q +P Sbjct: 415 NTDTSERQISTGLYLQDQLSLSERWRLLAGVRADAFRSTLNNLRNGAVTRQDKHAYSPRL 474 Query: 495 AVTFKIVPELSTYVSYAEGFEQPGPAGYDTNNAGENLPPLQTRQYEAGVKY-GLNPDLML 553 +T+ + P S YVS ++ F +P +G D +G P +R EAG+K+ + Sbjct: 475 GLTYLLTPSWSVYVSASKSF-RPN-SGSDV--SGNAFSPETSRAAEAGLKFQSEDKRSGA 530 Query: 554 TGAVFRLEK----TLQYVNAGRFTVQGGMQRHSGLELTANGRLSKRLSIVAGLAYLQTKA 609 T AVF + K T N F++ G R G+EL AN RL + LAY T A Sbjct: 531 TLAVFDITKQNVLTTDPANPN-FSIAAGEVRSKGVELDANARLGHHWRVTGNLAY--TDA 587 Query: 610 DNPADPAI-AGKQIADVPKLQGNVFVDYRVPGIDG--LNVNGGMYYVGRRPLNTQNTAWM 666 D + G ++ ++P+ ++ + G V GG+ YVGRR + + + Sbjct: 588 YVSRDNTLPVGSRLVNIPRSSASLLAVFEDADAHGAPYGVGGGLNYVGRRTGDQAGSFML 647 Query: 667 GGYTRFDTGARYVTRIGGY-----KTTFGLTVQNLLDKRYWAA 704 Y R Y K L V NL +KRY+++ Sbjct: 648 PSYV--------TARALAYWQFTPKMKLSLDVNNLFNKRYYSS 682 >gi|300309869|ref|YP_003773961.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 725 Score = 153 bits (387), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 193/707 (27%), Positives = 299/707 (42%), Gaps = 62/707 (8%) Query: 54 SAAAEKLPEVSVSG----ARPSLYA----TDGVNVGALGYKKPEELPFSVQSYSSELIDA 105 +A LP V+V+G P+ YA G +G LG + + PFS +Y+ E I Sbjct: 49 TAQDASLPTVTVTGRSDTGLPAAYAGGQVARGGGLGVLGTQDVLDTPFSTLNYTVEGIKN 108 Query: 106 QESRTMMDVLKNDPSVQDATQAGAY-EMVRIRGYFSDWTNTVRRDGMSVAPYYEIPLENV 164 ++RT+ DV+ ++ SV++ G + + +IRG +T + + + Sbjct: 109 LQARTVGDVITSEASVRNTNGDGGFGDSYQIRGLPVSVNDTGFNGLYGLVSLSRMSTAML 168 Query: 165 EQIDLLKGPSGFLYGINSPGG---TINYAIKRPTRDRFTSIKTSLRSDSGGGTYVALDTG 221 E++++LKGP +YG+ GG IN KR + +S+ TYV Sbjct: 169 ERVEVLKGPGTLMYGMGPAGGVGGAINLVSKRAGEEPVSSLT---------ATYVGSAQL 219 Query: 222 GPLDDGRFGYRFNVARE---RNGDFHHNGDTS-------RDFVSGAFDWAINPDLLVRAN 271 G G G RF +E R + +G TS + S A D+ Sbjct: 220 GL--QGDIGRRFGQDKEWGIRVNALYADGRTSVADNRQQQSMGSLALDYTGRKLRWTLDA 277 Query: 272 FDYQE--RKISAQPSIGPYLNGQLPPVSSIDPRTLLGQPWLQYETRTFNIGADLQYRIND 329 + E R Q SIG +P + D G LQ + + + L+Y + + Sbjct: 278 YTQHEDTRNFRPQFSIG---TTSMPSAPAGDSNLYPGNT-LQIDDKV--VATRLEYDLTE 331 Query: 330 KWKLTTRAAQSYNGRVAA--FPDVYNVAANGNILSGDIYYNPNQSFRVISTDSYVSGDVE 387 + LT A Y+ A FP +G + YY+ Q S D + Sbjct: 332 Q--LTAYGAIGYHEGATAQSFPSATITGLDGATSVRNGYYD--QKVVSTSADVGLRARFA 387 Query: 388 TIGIRHQLVTGFSTRNFQAVESGFKVLPDTVGNIYNPVFTSAPSNLTYPNHNKSKNYQPS 447 T ++H L +T + Q F N+Y P + + +S+ Sbjct: 388 TGPVQHTLSMAANTLDQQTSYFYFVNATGVASNLYQPAPLAPVTAARGEPLPQSQTRLSG 447 Query: 448 VFISDLMSLSD-RWDVMLGLRHVR-YKNDSMPASGRNTSQTASINAPSAAVTFKIVPELS 505 + ++D +S++D R + GLR + Y N S N +P V K + LS Sbjct: 448 LALTDTLSIADGRLLLTGGLRRQQVYSNSFSTRSSSNKIG----YSPVLGVVVKPLENLS 503 Query: 506 TYVSYAEGFEQPGPAGYDTNNAGENLPPLQTRQYEAGVKYGLNPDLMLTGAVFRLEK--- 562 Y +Y G G AG NAG+ P +T+QYE+GVK + T AVF++E+ Sbjct: 504 LYANYTAGLSAGGFAGAQYANAGQAFAPYKTKQYESGVKLDWG-RVTTTAAVFQIERANS 562 Query: 563 TLQYVNAGRFTVQGGMQRHSGLELTANGRLSKRLSIVAGLAYLQTKADNPADPAIAGKQI 622 + V + F Q G R GLEL+A G + L ++A + +T+ + GK+I Sbjct: 563 STAVVGSQTFATQDGRARVRGLELSAYGEAQRGLRLMASGTFFETRQSHTVGGTNDGKEI 622 Query: 623 ADVPKLQGNVFVDYRVPGIDGLNVNGGMYYVGRRPLNTQNTAWMGGYTRFDTGARYVTRI 682 VPK N+ D+ P + GL +N + G + NT + G+TR D GARY +R+ Sbjct: 623 GAVPKHNFNLGADWDTPWLQGLALNTRIINTGASWYSDANTVKVPGWTRMDLGARYTSRL 682 Query: 683 GGYKTTFGLTVQNLLDKRYWAAGDADING-AWAGKPRTMFLSAQVDL 728 GG T+ ++NL DK YW NG A G RT+ LSAQVD Sbjct: 683 GGQTITYRANLENLFDKHYWIM----QNGYAGYGAGRTLVLSAQVDF 725 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.316 0.134 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,481,999 Number of extensions: 113540 Number of successful extensions: 365 Number of sequences better than 1.0e-08: 18 Number of HSP's gapped: 312 Number of HSP's successfully gapped: 20 Length of query: 728 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 636 Effective length of database: 1,184,250 Effective search space: 753183000 Effective search space used: 753183000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)