BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0081.p
         (294 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase [Her...   377   e-106
gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase [Her...   244   4e-66
gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase [Her...   105   3e-24

>gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 307

 Score =  377 bits (969), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/264 (75%), Positives = 224/264 (84%), Gaps = 3/264 (1%)

Query: 1   VATFDIPNIVQSLHEARLSWRQAQRRASEPGGREFPSRDALSEVIESLKGVLFPMRLGPP 60
           +A FDI  IVQSLHEAR+ WR AQRR ++  GREFPSRDAL  ++ +LKGVLFPMRLGPP
Sbjct: 1   MANFDIHQIVQSLHEARVGWRVAQRRNNDSSGREFPSRDALDGIVTTLKGVLFPMRLGPP 60

Query: 61  DLRQESEDFHVAHALDAALHSLLKQVRLELKYNAALTSVAGAPERDIEHDALAATRTFAA 120
           DLRQESE+FHVAHALDAALH+LL QVRLELKY+A L+   G P  ++E DA++ TR F A
Sbjct: 61  DLRQESENFHVAHALDAALHALLGQVRLELKYSAGLS---GRPTPNLEQDAISITRAFGA 117

Query: 121 ALPAIRTLLDSDVLAAYQGDPAARSVDEVLLCYPGVLAMIHYRLGHQLYVLGLPLLARIV 180
           +LP IR+ LD+DVLAAYQGDPAARSVDEVLLCYPG LAMIHYRL H+LY LGLPLLARI+
Sbjct: 118 SLPQIRSQLDTDVLAAYQGDPAARSVDEVLLCYPGALAMIHYRLAHRLYQLGLPLLARII 177

Query: 181 AELAHGATGIDIHPGAIIGAGFFIDHGTGVVIGETAVIGERVRVYQAVTLGAKRFPTDAE 240
           AELAH ATGIDIHPGA IG GFFIDHGTGVVIGETAVIG  VR+YQAVTLGAKRFPTDA+
Sbjct: 178 AELAHAATGIDIHPGAQIGTGFFIDHGTGVVIGETAVIGNNVRIYQAVTLGAKRFPTDAD 237

Query: 241 GNLQKGLPRHPVVEDDXMRPAAAS 264
           G L+KG  RHP+VEDD +  A A+
Sbjct: 238 GKLEKGRARHPIVEDDVVIYAGAT 261


>gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 311

 Score =  244 bits (624), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 126/232 (54%), Positives = 163/232 (70%), Gaps = 5/232 (2%)

Query: 33  REFPSRDALSEVIESLKGVLFPMRLGPPDLRQESEDFHVAHALDAALHSLLKQVRLELKY 92
           RE PSR+A+ ++++ L+  LFP   G  DL  E+ D+ V   L+  L  L +QVR  L +
Sbjct: 44  RELPSREAMHKLLQHLQAALFPTHYGHTDLSDETIDYFVGSQLNTGLSILKEQVRRSLYF 103

Query: 93  NAALTSVAGAPERDIEHDALAATRTFAAALPAIRTLLDSDVLAAYQGDPAARSVDEVLLC 152
           ++ L     AP R+    A   TR FA  LPA+R +L SD+ AAY GDPAA S+ E+LLC
Sbjct: 104 SSDLQE--DAPLRE---QAARITRDFAHQLPAVRDVLVSDIQAAYHGDPAASSISEILLC 158

Query: 153 YPGVLAMIHYRLGHQLYVLGLPLLARIVAELAHGATGIDIHPGAIIGAGFFIDHGTGVVI 212
           YPG  A+I++RL H L+ LG PLLAR++A++AH ATGIDIHP A IG  FFIDHGTGVVI
Sbjct: 159 YPGTTAIIYHRLAHALHQLGAPLLARLIADIAHSATGIDIHPAAQIGPSFFIDHGTGVVI 218

Query: 213 GETAVIGERVRVYQAVTLGAKRFPTDAEGNLQKGLPRHPVVEDDXMRPAAAS 264
           GET +IG  VR+YQAVTLGAKRFP + +G+L KG+PRHP+VEDD +  A A+
Sbjct: 219 GETTIIGRNVRLYQAVTLGAKRFPQEPDGSLVKGIPRHPIVEDDVVVYAGAT 270


>gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 250

 Score =  105 bits (263), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 8/125 (6%)

Query: 129 LDSDVLAAYQGDPAARSVDEVLLCYPGVLAMIHYRLGHQLYVLGLPLLARIVAELAHGAT 188
           L  D+ +    DPAAR+  EVL CYPG+ A+I +R     +   L  L R +++L    T
Sbjct: 5   LREDIASIRARDPAARNSWEVLTCYPGLHALILHRWAKACWQAQLKWLGRFISQLGRMLT 64

Query: 189 GIDIHPGAIIGAGFFIDHGTGVVIGETAVIGERVRVYQAVTLGAKRFPTDAEGNLQKGLP 248
           GI+IHPGA IG   FIDHG GVVIGETA++G+   +YQ VTLG          +L KG  
Sbjct: 65  GIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGT--------SLVKGAK 116

Query: 249 RHPVV 253
           RHP +
Sbjct: 117 RHPTL 121


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.137    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 812,721
Number of extensions: 33483
Number of successful extensions: 117
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 3
Length of query: 294
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 210
Effective length of database: 1,222,130
Effective search space: 256647300
Effective search space used: 256647300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)