BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0076.p (2160 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312548|ref|YP_003776640.1| filamentous hemagglutinin outer... 608 e-174 gi|300310626|ref|YP_003774718.1| filamentous hemagglutinin prote... 345 2e-95 >gi|300312548|ref|YP_003776640.1| filamentous hemagglutinin outer membrane protein [Herbaspirillum seropedicae SmR1] Length = 2685 Score = 608 bits (1568), Expect = e-174, Method: Compositional matrix adjust. Identities = 472/1195 (39%), Positives = 669/1195 (55%), Gaps = 182/1195 (15%) Query: 873 DITPTNGSGAQQARTLKSTPSSIPGNTSMVVRTGNPDISLP--DSALFVPGNN-RYLIAT 929 D+T T GSG Q ++ + S+ PG T+ PD +P + +FVP + YL+ T Sbjct: 997 DLTLTTGSG-QSVGSVLNDASARPGATA-------PDAPVPVRPNPMFVPATSGNYLLET 1048 Query: 930 DPQFANYRSWLSSDFMLTQLSQDPNLVMKRLGDGFYEQLLVQQQIQKAIGQRYAGNHANN 989 QF + R+WLSSD++LT L+ DP+ KRLGDGFYEQ +V++Q+ + G R +G+ N+ Sbjct: 1049 RTQFTDRRTWLSSDYLLTALNVDPSTTQKRLGDGFYEQRMVREQMAQLTG-RPSGSF-ND 1106 Query: 990 EAQYQALMTAGVQMAQLFHYQLGIALTATQMAMLTSDIVWLVKQTVALADGSTQDVLVPQ 1049 ++QYQ L+ V +AQ ++ + G+ALT Q++ LTSDIVWL Q V L DG T++VLVP+ Sbjct: 1107 DSQYQKLLNNAVSVAQSWNLRPGVALTPDQVSHLTSDIVWLETQKVVLPDGRTEEVLVPK 1166 Query: 1050 VYL-RANRLQVTGEGTLISGTNVNYQTAGDILNYGTIAAKNTAVLAGNNINNLGGRVSGT 1108 +YL ++ + G L+SG N+ Q A +I N G + GR SGT Sbjct: 1167 LYLAHIDKDALKNSGALVSGDNITIQ-AENISNKGGF---------------IDGRASGT 1210 Query: 1109 -DTILQAQTDINNLGGKIDGRNSAALLANRDISVNSTSVSTA---NATTSGS-----NID 1159 T+L A DI NLGG I G + + A R++ N T +T N TSGS N Sbjct: 1211 GRTVLVASNDIANLGGGISG-DEIVISAGRNVR-NETLTTTQTYNNGQTSGSYTSLSNQG 1268 Query: 1160 SVASVTGNTLTMAAGRDITANAAVIN-------ATGNANLSAVRDVNLGTVTQGYTEQIR 1212 S+A+ LT+ AG DIT A + ATG ++SA RD+NLGTV G T Sbjct: 1269 SIAA--DKNLTITAGADITNLGATVASGRSGDAATGKLSMSAGRDINLGTVKTGSTYDAN 1326 Query: 1213 WADDKGASNWVST--------------------LTGPNFVDQANGA-------------- 1238 ++ G + VS+ LT NG+ Sbjct: 1327 FSGYFGHAQSVSSVGSTVNAGGDLTMVAQRDLSLTAAQVAIGTNGSGNGSLMAGRAVTIG 1386 Query: 1239 ---HGTEAGVNRA---TVTASQEVATQITGNNI------SINAG----HDLTTKGTQVTA 1282 E+ + RA + + + + + + G+NI SI AG D+ + +TA Sbjct: 1387 AALDRAESTIGRAASRSYSRADDESVAVRGSNIDAAGGISIKAGLMEKADVKVAASSITA 1446 Query: 1283 VAALAATAGNNLNIGTANESASARDEHQKSSS-GILSGKTTQTDDASSYSRQTGSTFSGN 1341 AL A ++N+ + ES + E+ KS+S G+LS T + +Y+ GST SG+ Sbjct: 1447 GKALEVAATGDINV-VSEESFQSHSEYAKSTSRGLLSSTTRTSYGKRAYTNAVGSTLSGD 1505 Query: 1342 TTVLAAGNNATITGSDVVSTQGTQITAVNDINIVAATDTSTESHYKKETTSGMFSGGGLG 1401 TTVL AG + +I GS+VVS+ GT + A N+I + +A+D + + +SG+ SGGGLG Sbjct: 1506 TTVLQAGKDMSIVGSNVVSSAGTSLVAANNITVASASDKVESAEGSNKKSSGLLSGGGLG 1565 Query: 1402 VTVGSKMQSTAQTRSSSTVSGSTVGATNGDVTLAAGQHYTQTASAVIAPQGNVSISGKQV 1461 T+G++ T +ST S VG+ +G+V++ AG YTQ+ S V+AP+G++ + KQ+ Sbjct: 1566 FTIGTRELDNKNTTVNSTAVSSNVGSIDGNVSIKAGNAYTQSGSNVLAPKGDIDVVAKQI 1625 Query: 1462 DITAGVNTEQNTQETKSKQQGVTVQITNPVVSAVQTVMSMQDAKQKTKNGRSKVLADAAS 1521 I A TE++TQ+ KQ G+T+QIT+PV+SA+QT M A + T GR ++LA A Sbjct: 1626 SILAAAETERSTQDMVFKQSGLTIQITSPVLSAIQTAQQMAQAAKSTSGGRMQLLAAANI 1685 Query: 1522 ALAVANAAGAV-----------------------------GGSAAP----------AGGV 1542 A NA AV G P AGG+ Sbjct: 1686 GFAGKNAVDAVRTGQGFAVDGKDNPQVRTNALDENGDLKLGADKKPETRDATAADKAGGI 1745 Query: 1543 DLAISMGTSSNQSNTVQTSTTSAGSTVVAGGNTTIIAIGAGAKSNLTIGGSEV-SGTNVN 1601 +LAIS+G S +++++ +++T+ GST+ AGGN ++ A G GA SN+ + GS++ SG N Sbjct: 1746 NLAISVGASKSENHSQSSASTARGSTLNAGGNISLTAQGGGADSNVIVQGSDIRSGANTL 1805 Query: 1602 LKADSQINLIGQRNSNEEHSTNKGSSASLGISFGSSGFMVNASASGSRGKGDGSDSDVTN 1661 LKAD+++ L+ +++ E+ S+NK S S+GIS G+ GF+VNA SGSRG+GDGSD N Sbjct: 1806 LKADNEVRLLAAQSTTEQSSSNKAMSGSVGISIGTDGFLVNAGLSGSRGRGDGSDVAQVN 1865 Query: 1662 THVKASNQLTMNSGGDTTIEGATASGEQVTANVG----GNLNVESLQDTSQYKSQQQSLG 1717 THV A N+LT+ SG DTTI+GA ASG+QV +VG GNLN+ESLQDTS YKS+QQS G Sbjct: 1866 THVDAGNKLTIASGTDTTIKGAVASGKQVVIDVGTSGSGNLNIESLQDTSTYKSRQQSAG 1925 Query: 1718 GSISVGLGTKGFVSGSLSASRSKVDGNYQSVTEQSGILAGADGFKINVNGNTDLKGSKIT 1777 SIS G+G +SGSL+ +RS VDGNY SV EQSGI AG DGF+INV GNTDLKG+KI Sbjct: 1926 VSISAGMGR---MSGSLNLARSSVDGNYASVNEQSGIKAGDDGFQINVAGNTDLKGAKIA 1982 Query: 1778 SNDKAITDNKNSFTTASLTTSNLQNKSDYKAESQSFSVG----GGNSALNGAGIGFGKDS 1833 S DKA D KNS TT +LT S+++N+SD+KAESQS +G G L G+ +G G S Sbjct: 1983 STDKAAADGKNSLTTETLTQSDIKNRSDFKAESQSVGMGTNLAGSVLGLAGSALGRGNVS 2042 Query: 1834 GSVSSTTTSGVS----------------GIAGDTT-------VRSDKDNSNALKKTWNGK 1870 GS SSTT SG+S G + T V S++D S + KTWNG+ Sbjct: 2043 GSDSSTTRSGISQADIKITDDAAQQAKTGKTAEQTIASINADVSSERDTSGKIAKTWNGQ 2102 Query: 1871 ELQQDAEAQNQIMQEATKQVS-VATIYRVIQSATADKKILLQKCDSGGQNCQSTK 1924 ELQ D EAQ +I + +QV+ +A Y A + +K L Q + QN T+ Sbjct: 2103 ELQADVEAQAEITRAFGQQVAQLAGAY-----AESKEKELRQAASNAAQNGDQTQ 2152 Score = 360 bits (925), Expect = e-100, Method: Compositional matrix adjust. Identities = 267/649 (41%), Positives = 362/649 (55%), Gaps = 89/649 (13%) Query: 1 MNKNCYRVVFNRNTCEYTAVAETTCTRSKGRSTGSAALFIAALSALSGLFFLRLRYLAVG 60 MN+ CYR++FN+ AVAETT + R+ GS AL GL RL + +G Sbjct: 1 MNQLCYRIIFNKTRGLLMAVAETTRACAGKRAVGSRPGV-----ALGGLPMARLSW--IG 53 Query: 61 IAALFGSATVVD------AQVVAYRNAPGNQQPTVLQTGNGVPLVNIQTPSAQGVSRNVY 114 +A L + +V AQ++A NAP QQP V+ T NG+P VNIQTPSA GVSRN Y Sbjct: 54 LAVLLATGALVTTMPRAYAQIIADPNAPRAQQPVVVNTANGIPQVNIQTPSAAGVSRNTY 113 Query: 115 SQFDVDSKGVILNNARNNALTQLGGWVQGNPWLATGTAKVILNEVNSSNPSYLRGYVEVA 174 SQFDV+ G ILNN+R++ TQLGGWVQ NP LA GTA+VILNEVNSSNPS LRG+VEVA Sbjct: 114 SQFDVNRAGAILNNSRSDVQTQLGGWVQRNPNLANGTARVILNEVNSSNPSMLRGFVEVA 173 Query: 175 GDRAQVILANPSGLVISGGGFLNASRATLTTGLPNIVGGALDSYRVSGGTVIIDGNGLDA 234 GDRAQVI+ANPSG+ G GF+NASR+TLTTG P I G+LD Y V GG V I GNGL+ Sbjct: 174 GDRAQVIIANPSGVTCDGCGFINASRSTLTTGTPIINNGSLDGYLVRGGVVSIKGNGLND 233 Query: 235 RSTDYTDIMARAVQVNANIWSNKLKVSTGVNTISADNSVVTPTTGATGAAPGQFSIDVAK 294 + +TD++ARA ++NA IWS +LKV+ G N ++ADN+ VT + A A P QF IDVA+ Sbjct: 234 SQSSFTDLIARAAKINAGIWSKELKVTVGTNQVNADNTTVTAVS-ADPAKP-QFGIDVAQ 291 Query: 295 LAGMYSGQIVLVGTEHGVGMNNSGVIGAGAGDVIVSVDGLLQNKGSITATQNIATTATGL 354 L GMY+ +IVLVGTE GVG+ N+G IGA AG++ ++ G ++N GS+ AT ++ ATG Sbjct: 292 LGGMYANKIVLVGTESGVGVRNAGAIGAAAGELTLTAAGRIENSGSLAATASLGVRATG- 350 Query: 355 NNQGSQFQAGGSTTLALGAGQLDNSNGLVRSNLTTTITAE-NVNNSNTTGADFGIQGQAV 413 QG G + NS + S + A+ +NNSNT A G V Sbjct: 351 --QG---------------GDIVNSGSVASSAAAVKLQADGGINNSNTISAQSG-----V 388 Query: 414 TIAATNVNNKTGTVRANTDLTMAGAGAIDNTNGSLSASQTLDVHDTHAAGSPKTQTIVNT 473 T+ A ++ N A ++ + GA++N+ G + A+ + + T G+ I NT Sbjct: 389 TLTAASLQNSGAISAATGNVEVDTHGAVNNS-GKVQAAGDISISATQPQGNAAAD-ISNT 446 Query: 474 GGTLIAGK-------QLSVD-------------------------SATMT--------GD 493 G AG+ LS D +A T + Sbjct: 447 GNIEAAGQLGLTADGMLSNDGSITAQSIRAGVQGLRNNGSIGTRSNAAFTLQQGLVQGAN 506 Query: 494 GKALSLGDLSLELDANYRNTGIIQADGNTTVTTAGKLIN-SGKLLAGKTLAATA-KSIDN 551 G+ ++ DL+L + +Y N G +QA NT +A + N SG L + TA +DN Sbjct: 507 GRLSAVSDLNLTMQGDYDNAGRVQA--NTLTLSAANIGNRSGAALQAADITLTALNRLDN 564 Query: 552 QTGGQLIAKTHQLRATDSHTFTNRGLIDGSDTFIDSPTINNIGTGRIYG 600 G+ I+ QL T + + N I G D +++ T+ N G + G Sbjct: 565 --AGE-ISANRQLNIT-ADSILNSATILGKDLVVNARTLENTGANALLG 609 >gi|300310626|ref|YP_003774718.1| filamentous hemagglutinin protein [Herbaspirillum seropedicae SmR1] Length = 2658 Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 307/896 (34%), Positives = 459/896 (51%), Gaps = 109/896 (12%) Query: 1106 SGTDTILQAQTDINNLGGKIDGRNSAALLANRDISVNSTSVSTANATTSGSNIDSVASVT 1165 +G D A +I G ID + +AALLA + V++ +T + T S+ + +V Sbjct: 1340 AGGDASFAAGRNIAVRGSSIDVKGNAALLAGGSVEVSAVKTATDSVVTGRSDRYDL-NVV 1398 Query: 1166 GNT--LT---MAAGRDITANAAVINATGNANLSAVR--------------DVNLGTVTQG 1206 G+T LT +AAG+ ++ A+ N +G+ L+A R D+++G + + Sbjct: 1399 GHTENLTTSQIAAGKGLSIVASGQNGSGDITLAASRLSSKEGEVTLNAAGDISIGAMQKN 1458 Query: 1207 YTEQIRWADDKGASNWVSTLTGPNFVDQANGAHGT----EAGVNRATVTASQEVATQITG 1262 +I D++G W+ T D ++ A G+ E GVN +AT + Sbjct: 1459 NDNRI---DERGGKAWMKTH------DSSSVAAGSLIEGEKGVNL--------IATGRSD 1501 Query: 1263 NNISINAGHDLTTKGTQVTAVAALAATAGNNLNIGTANESASARDEHQKSSS---GILSG 1319 +S+ AG D+ + GT +A A ++ T E+ S+ DE Q++ S G LS Sbjct: 1502 AKVSV-AGSDIYSNGT-------IAIQAKGDV---TVAETRSSSDEWQQAHSESRGFLSR 1550 Query: 1320 KTTQTDDASSYSRQTGSTFSGNTTVLAAGNNATITGSDVVSTQGTQITAVNDINIVAATD 1379 ++ D GST SGN V+ AG N + GS+VVST+ T + A ND++I + Sbjct: 1551 SSSDRTDQVRQDMANGSTLSGNKVVIDAGRNIAVRGSEVVSTELTSLRAANDVSITTTQN 1610 Query: 1380 TSTESHYKKETTSGMFSGGGLGVTVGSKMQSTAQTRSSSTVSGSTVGATNGDVTLAAGQH 1439 + +SHYK++ SG+ G G G+++GS+ Q SS T + STVG+ NG+V + AG Sbjct: 1611 FTEQSHYKEDRKSGLM-GAGFGISIGSQGQMANGNGSSVTNNASTVGSVNGNVNIIAGNA 1669 Query: 1440 YTQTASAVIAPQGNVSISGKQVDITAGVNTEQNTQETKSKQQGVTVQITNPVVSAVQTVM 1499 + Q S V+APQG+++I K VDI A + TQE K KQ G+T+ I +PV+S +QT Sbjct: 1670 FRQIGSQVVAPQGDINILAKSVDIGAAYDASVYTQENKFKQSGLTLAINSPVISVLQTGQ 1729 Query: 1500 SMQDAKQKTKNGRSKVLADAASALAVANAAGAVGGSAAPAGGVDLAISMGTSSNQSNTVQ 1559 + A QKT + R + LA A A +A A+ GV + +S+G+S + + Q Sbjct: 1730 QLIQAGQKTPDKRMQALAAATLAKNAYDAGAALIDKPTDTSGVKITLSLGSSQSSNKVTQ 1789 Query: 1560 TSTTSAGSTVVAGGNTTIIAIGAGAKSNLTIGGSEVS-GTNVNLKADSQINLIGQRNSNE 1618 S+ + GSTV AGG I+A G G +S++ + GS +S G +V+L AD +INL+ +++ Sbjct: 1790 ASSQAVGSTVAAGGAVNIVASG-GPRSDINVVGSAISAGGDVSLVADHEINLLAAQSAYS 1848 Query: 1619 EHSTNKGSSASLGISFG----SSGFMVNASASGSRGKGDGSDSDVTNTHVKASNQLTMNS 1674 +H N S AS+GI F +GF + A+ +RG DG D + + A NQ ++ S Sbjct: 1849 QHGNNNSSGASIGIGFAMGGSQNGFTLELGANRARGNLDGDDLVNKASTISAGNQASLIS 1908 Query: 1675 GGDTTIEGATASGEQVTANVGGNLNVESLQDTSQYKSQQQSLGGSISVGLGTKGF--VSG 1732 GGDT + G+T S + V A +GG+LN+ESLQD S Y S+Q S G +S+ + + S Sbjct: 1909 GGDTNVRGSTVSAKTVAAAIGGDLNIESLQDKSTYGSKQSSAGVGLSLCIPPFCYGASSV 1968 Query: 1733 SLSASRSKVDGNYQSVTEQSGILAGADGFKINVNGNTDLKGSKITSNDKAITDNKNSFTT 1792 S S S SK G+YQSV Q+GI AG GF++ V GNTDLKG+ I+S KAI D KN T Sbjct: 1969 SGSLSGSKAKGDYQSVVTQAGIKAGDGGFRLVVAGNTDLKGAVISSTAKAIEDGKNFLQT 2028 Query: 1793 ASLTTSNLQNKSDYKAESQSFSVGGGNSALN--------------------GAGIGFGKD 1832 +LT S++ N Y+A S S G +S L G G+ Sbjct: 2029 GTLTYSDISNHDAYEASGYSVS-GSMSSQLGDQSKAKTEADKAAANSRTGPGGSPGYSDT 2087 Query: 1833 SGSVSSTTTSGVSG---IAGDTT--------------------VRSDKDNSNALKKTWNG 1869 GS SS T SG+SG I D V S KD+S AL K W+G Sbjct: 2088 GGSQSSVTRSGISGGTVIITDEQGQKAATGQSAEQILASLNRDVDSSKDSSGALSKAWDG 2147 Query: 1870 KELQQDAEAQNQIMQEATKQVSVATIYRVIQSATADKKILLQKCDSGGQNCQSTKV 1925 + L+Q EA+ QI Q A Q +I + D K ++ + G Q+ K+ Sbjct: 2148 EALRQQVEAEAQIRQ-AFGQTVAKSIGDYADTKERDLKNAAKQAEQDGDAEQAAKL 2202 Score = 261 bits (666), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 248/742 (33%), Positives = 363/742 (48%), Gaps = 114/742 (15%) Query: 53 RLRYLAVGIAALFGSATVVDA---QVVAYRNAPGNQQPTVLQTGNGVPLVNIQTPSAQGV 109 R L +AAL VV Q+VA NA ++P V T NG PLV I TPSA GV Sbjct: 15 RHGVLRRAMAALMIMLCVVPPGYPQIVADPNAGAGKRPVVDNTANGRPLVQIATPSAAGV 74 Query: 110 SRNVYSQFDVDSKGVILNNARNNALTQLGGWVQGNPWLATGTAKVILNEVNSSNPSYLRG 169 S N YSQF+V G ILNNAR+ LTQ GG+V NP L G A+VILNEV S++PS LRG Sbjct: 75 SHNQYSQFNVGPNGAILNNARDVVLTQQGGYVGANPNLQGGAARVILNEVTSTSPSQLRG 134 Query: 170 YVEVAGDRAQVILANPSGLVISGGGFLNASRATLTTGLPNIVG-GALDSYRVSGGTVIID 228 Y EVAG RA+VI+ANP+G+ G GF+N SR LTTG+P G G+L+++RVS G + I Sbjct: 135 YTEVAGQRAEVIIANPNGISCDGCGFINTSRGVLTTGVPLFGGNGSLEAFRVSRGAIQIG 194 Query: 229 GNGLDARSTDYTDIMARAVQVNANIWSNKLKVSTGVNTISADNSVVTPTTGATGAAPGQF 288 GL+ +TD D++AR+VQVN +W N+L + TG N ++ + ++ G G AP Sbjct: 195 SGGLNGANTDQLDLIARSVQVNGELWGNRLNLVTGANRVNYGDLGLSVIAG-EGNAP-TI 252 Query: 289 SIDVAKLAGMYSGQIVLVGTEHGVGMNNSGVIGAGAGDVIVSVDGLLQNKGSITATQNIA 348 +DVA++ GMY+ +I+LVGTE+GVG+ + G + A AG +S G + G +A+ +I Sbjct: 253 GVDVARMGGMYAQKIMLVGTENGVGVRSLGTLAAQAGSFTLSSQGQIALSGKTSASDDIV 312 Query: 349 -TTATGLNNQGSQFQAGGSTTLALGAGQLDNSNGL-VRSNLTTTITAENVNNSNTTGADF 406 +A G +N G + AG + L G ++N+ L + NL ITA + ++ T A Sbjct: 313 LKSAVGTSNDGVLY-AGRNAQLQ--GGVIENAGTLSAQGNL--DITAAQLRSTGTLAAGV 367 Query: 407 GIQGQA-----VTIAATNVNNKTGTVRANTDLTMAGAGAIDNTNGSLSASQTLDVH--DT 459 G +T+ A+ TG RA DL + G G ID ++ S SA + L D Sbjct: 368 DQAGNVAQAGNLTVTASGDVLATGVNRAGADLQLVG-GKIDLSHSSSSAGRKLGAQASDA 426 Query: 460 HAAGSPKTQTIVNTGGTLIAGKQLSVDSATMTGD---------------GKALSLGDLSL 504 G +T+ G + G +++D A +T G+ S G +++ Sbjct: 427 LTLGGATVETLA--GDLELGGATITLDGAKLTSSADARINAVAGLSNRGGEITSAGAMNV 484 Query: 505 ELDANYRNTGIIQA----DGNTTVTTAGKLIN--------------------SGKLLAGK 540 + + G+I A G ++ +AG + N G ++A Sbjct: 485 TAASVDNSAGMISAATGGAGVLSLRSAGSISNGQGRIAAGAALNLAAASIQGQGSVIANG 544 Query: 541 TLAATAKSIDNQTGGQLIAKTHQLRATDSHTFTNRGLID----------------GSDTF 584 + +S++N+ G LI LR T S N+G + G D Sbjct: 545 DATLSLQSLNNEA-GSLIQSNRDLRITTSGATGNQGALKAIGALNLTASQIDNAAGGDIS 603 Query: 585 IDSPT-------INNIGTGRIYGDHVALSGDTLNNLAEIVNGVTSAPVIAARTRMD---- 633 + T INN G+I G+ +A + + LNN ++ G V R++ Sbjct: 604 AAATTLQALNGDINN--AGKIGGNTIATTSNALNNQGSMIGG----DVTINADRLNNSGA 657 Query: 634 ------------LGETTINNSDHALIYSAGDLVTGKALDASHQAIG----MGDTINNSSA 677 + + N D+ALIYS G LV A DA+ A G T+ NSSA Sbjct: 658 AAAIAATNSVQAFVRSALTNQDNALIYSLGKLVI--AADATQSAAGDYLHRTGTLTNSSA 715 Query: 678 TIAADGNATINHNIVNNINAHL 699 TI A G+ ++ + + N + L Sbjct: 716 TIEAGGDLAVSADTIVNKRSTL 737 Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 151/449 (33%), Positives = 209/449 (46%), Gaps = 61/449 (13%) Query: 781 SDPGMINIGGNLRFNSMTVNNRNSQIIAGGDNTGNNVLGTKP---VNNGVTGTQVVTTTG 837 SD +N G + N+ + N S IIAGG T N G+ V N + + T G Sbjct: 907 SDAAKLNASGRITINTAALTNDASDIIAGGALTINGANGSAASGGVVNNIGYSINRTAIG 966 Query: 838 TAKYTYIKSHRFSADDRRYDARPYEGQSIQTSFLLDITPTNGSGAQ----QARTLKST-- 891 TA Y DR Y ++ L N Q A+ L +T Sbjct: 967 TAVDHY---------DRHVGHHTYTTLNLTEVTALQTIDANIQSNQAVSISAQNLNNTTV 1017 Query: 892 -PSSIPGNTSMVVRTGNPDISLPDSALFV----PGNNRYLIATDPQFANYRSWLSSDFML 946 +++P V G+ +I+LP LF PG RYL+ TD +F +Y+++L SD+ML Sbjct: 1018 GAATVPTRAGGV---GHANITLPAGGLFTVRPEPGQ-RYLVETDRRFTDYKTFLGSDYML 1073 Query: 947 TQLSQDPNLVMKRLGDGFYEQLLVQQQIQKAIGQRYAGNHANNEAQYQALMTAGVQMAQL 1006 +L+ DP++ KRLGDGFYEQ L+ QI + G+++ + N EAQY+ALM +GV A Sbjct: 1074 GRLTMDPSMTQKRLGDGFYEQKLINDQIAQLTGKKFLDGYTNAEAQYKALMDSGVASAAS 1133 Query: 1007 FHYQLGIALTATQMAMLTSDIVWLVKQTVALADGSTQDVLVPQVYL-RANRLQVTGEGTL 1065 F GIAL+A QMA LTSDIVW+V V LADGS Q LVP VYL + G L Sbjct: 1134 FKLTPGIALSADQMAALTSDIVWMVDTEVTLADGSRQHALVPTVYLAHGGSATLQASGAL 1193 Query: 1066 ISGTNVNYQTAGDILNYGTIAAKNTAVLAGNNINNLGGRVSGTDTILQAQTDINNLGGKI 1125 I G +V LA + +NN G V D + A DINN GG++ Sbjct: 1194 IGGRDV--------------------TLAADTVNN-SGIVRAEDKLAVAARDINNTGGEL 1232 Query: 1126 DGRNSAALLANRDISVNSTSVSTANATTSGSNIDSVASVTGNTLTMAAGRDITANAAVIN 1185 G V+ + T N T N SVTG +++AA DI A I Sbjct: 1233 RGDK-----------VDVLATETLNIGTDFQNYGRQGSVTGRQVSLAA-NDINIIGAKIK 1280 Query: 1186 ATGNANLSAVRDVNLGTVTQGYTEQIRWA 1214 A L+A ++ + T + ++ W+ Sbjct: 1281 ADDTLKLAAQNNLTIAAATAQHDVKLTWS 1309 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.308 0.125 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 5,540,970 Number of extensions: 217285 Number of successful extensions: 881 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 795 Number of HSP's successfully gapped: 11 Length of query: 2160 Length of database: 1,619,870 Length adjustment: 100 Effective length of query: 2060 Effective length of database: 1,146,370 Effective search space: 2361522200 Effective search space used: 2361522200 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 138 (57.8 bits)