BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0058.p
         (197 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310983|ref|YP_003775075.1| alpha/beta hydrolase fold ester...   236   7e-64

>gi|300310983|ref|YP_003775075.1| alpha/beta hydrolase fold esterase
           [Herbaspirillum seropedicae SmR1]
          Length = 192

 Score =  236 bits (603), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 122/187 (65%), Positives = 136/187 (72%), Gaps = 6/187 (3%)

Query: 8   NQGSSVVPRIADFRVLVVPGLDGSGPEHWQSRWQRLYPAFERVEQDRWDVADLPVWSARL 67
           +Q SS   R+ADFRVLV PGL  SG EHWQSRWQRLYP FERV QD W+  DLP WS RL
Sbjct: 5   SQTSSAPARLADFRVLVAPGLSDSGAEHWQSRWQRLYPGFERVRQDDWESPDLPRWSQRL 64

Query: 68  QEVLAQDVRPTVIVAHSFGCLTTVHRV------GIDAGRIVGALLVAPADPEKFKVADVV 121
            EVLAQD RPTVIVAHSFGCL TVHR       G  A  IV ALLVAPADP KF V+  V
Sbjct: 65  GEVLAQDGRPTVIVAHSFGCLATVHRAAALQAEGGSAYPIVAALLVAPADPVKFGVSAAV 124

Query: 122 QVRLPFPSVVIGSTDDPWMSAERAEHWAGVWGAEFVNAGAVGHINTASGLGDWVAGQEVL 181
           + +LPF + VIGS +DPWMSAERA HWA  WGA+F + GA GHIN  SGLGDW  GQ+ L
Sbjct: 125 RHKLPFAARVIGSDNDPWMSAERARHWAEAWGADFRSVGAHGHINAESGLGDWTQGQQWL 184

Query: 182 AELVKRV 188
            EL+ ++
Sbjct: 185 LELLDQI 191


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.135    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 702,432
Number of extensions: 30989
Number of successful extensions: 100
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 1,619,870
Length adjustment: 80
Effective length of query: 117
Effective length of database: 1,241,070
Effective search space: 145205190
Effective search space used: 145205190
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)