BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0249.p
         (310 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311059|ref|YP_003775151.1| lipase transmembrane protein [H...   434   e-123

>gi|300311059|ref|YP_003775151.1| lipase transmembrane protein
           [Herbaspirillum seropedicae SmR1]
          Length = 321

 Score =  434 bits (1115), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 217/310 (70%), Positives = 246/310 (79%), Gaps = 5/310 (1%)

Query: 1   MIARIARTLLLTQFGVAALFYLLLVKLHVTNVPL--AVVLSLAMVGLFRASITANSFFLT 58
           MI+RI+RTLLL QFG+A LFY LL      + P+  A +  + +V L RA ITANSFFLT
Sbjct: 13  MISRISRTLLLIQFGIAILFYFLLRHF---DWPMLAAALGGILIVLLLRAQITANSFFLT 69

Query: 59  WPNRAKSAHTPELTWPGIFRLFAGEYCATMVCSSWGMPFQRFDKRIYTDTTSLPVLLIHG 118
           WP R ++++  E++W  I  LF  E+ ATM+CSSW MPF RFD+  Y DTTSLPVLLIHG
Sbjct: 70  WPYRGRTSNPVEISWLQIATLFVREFRATMLCSSWAMPFLRFDQFTYPDTTSLPVLLIHG 129

Query: 119 YGCNSGYWHWMSKALEEAHITHYAVDMEPVFGSIDGYAPLVHEAVQRLVTESGQDKIVIV 178
           YGCNSGYW WMS  L EAHITHYA+DMEPVFGSID YAPLVH AVQR++ E+GQ KIVIV
Sbjct: 130 YGCNSGYWRWMSLELREAHITHYALDMEPVFGSIDEYAPLVHAAVQRVLAETGQKKIVIV 189

Query: 179 AHSMGGLAARAYLRDHGCANIAKVITLGTPHHGTTIANFGIGINCGEMNWLGRAEEGTSS 238
           AHSMGGLAARAYLRDHGC  +A+VITLG+PHHGT IANFGIGINCGEMNWLGR EEG SS
Sbjct: 190 AHSMGGLAARAYLRDHGCDRVARVITLGSPHHGTAIANFGIGINCGEMNWLGRYEEGRSS 249

Query: 239 EWLQKLAATEEPATRAIILSIYSHHDNIVSPQISSHLPGAENVPISGIGHVALALNPTIQ 298
           EWLQKLAATEE    + I+SIYSHHDNIVSPQ SSHL GA N+P+ GIGHVALAL P IQ
Sbjct: 250 EWLQKLAATEEADALSHIVSIYSHHDNIVSPQSSSHLAGAWNIPVIGIGHVALALEPAIQ 309

Query: 299 ARVVAEIHKA 308
             V+  IH A
Sbjct: 310 KLVIDLIHNA 319


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.136    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,003,286
Number of extensions: 41720
Number of successful extensions: 136
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 225
Effective length of database: 1,217,395
Effective search space: 273913875
Effective search space used: 273913875
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 130 (54.7 bits)