BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0218.p
         (254 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311722|ref|YP_003775814.1| phosphate acetyl/butaryl transf...   317   7e-88

>gi|300311722|ref|YP_003775814.1| phosphate acetyl/butaryl
           transferase [Herbaspirillum seropedicae SmR1]
          Length = 484

 Score =  317 bits (812), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 164/242 (67%), Positives = 187/242 (77%), Gaps = 1/242 (0%)

Query: 4   EDLL-LVQNLTFDEIAIGDSASIERTLTAQDIQLFAILSGDVNPQHLDAEFASSTRFHGV 62
           +D+L L++N  F EIA+GDSA+I RTLT  DIQLFA++SGD NPQHLD  FA  TRFHG+
Sbjct: 19  DDVLGLIRNRIFSEIAVGDSATITRTLTLADIQLFAVISGDANPQHLDLAFAKETRFHGL 78

Query: 63  IAHGMLGGALISAVLGTRLPGPGTVYLGQTLNFRAPARIGDRLTISVRVTERHETSKRLL 122
           IAHGM GGALISAVLGTRLPGPGT+YLGQTL F AP RIGD L  +V V ER E  K L 
Sbjct: 79  IAHGMFGGALISAVLGTRLPGPGTIYLGQTLRFVAPVRIGDTLRTTVTVKERDEARKLLT 138

Query: 123 LACSCINQDGVTVIEGLADVIAPVERISMPRTTLPEVRLLGGDDGLFRLLEHVRPMGAVT 182
           LAC+CINQDGVTVIEG A V+AP E I   RT+LPEV +  GD  L  LLEH R  G   
Sbjct: 139 LACACINQDGVTVIEGEAKVLAPTEPILRRRTSLPEVSMKMGDADLQLLLEHARKPGPAP 198

Query: 183 TAVVHPCDALSLSAALDAQAAGLIVPVLVAPRARLQAVADDNQLDISALRIEDVPHSHAA 242
            AVVHPCD LSL+A LDA AAGLI P+LVAPR+RL A+A+ ++LDISA  +EDVPHSHAA
Sbjct: 199 VAVVHPCDELSLAAVLDAHAAGLISPILVAPRSRLLALAESHKLDISAFPLEDVPHSHAA 258

Query: 243 AA 244
           AA
Sbjct: 259 AA 260


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 658,775
Number of extensions: 24257
Number of successful extensions: 95
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 2
Length of query: 254
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 171
Effective length of database: 1,226,865
Effective search space: 209793915
Effective search space used: 209793915
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)