BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0193.p
         (222 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311017|ref|YP_003775109.1| glutathione S-transferase famil...   352   2e-98
gi|300311872|ref|YP_003775964.1| glutathione S-transferase famil...    69   4e-13

>gi|300311017|ref|YP_003775109.1| glutathione S-transferase family
           protein [Herbaspirillum seropedicae SmR1]
          Length = 223

 Score =  352 bits (902), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 165/223 (73%), Positives = 199/223 (89%), Gaps = 1/223 (0%)

Query: 1   MITVHHLNNSRSQRVLWLLEELGLEYDIKFYQRDPKTMLAPRELMQVHPLGKSPVITDGD 60
           MITVHHLNNSRSQRVLWLLEELGL+Y+IKFYQRDPKTMLAP EL++VHPLGKSPVITDG+
Sbjct: 1   MITVHHLNNSRSQRVLWLLEELGLDYEIKFYQRDPKTMLAPPELLKVHPLGKSPVITDGE 60

Query: 61  LTIAESGAIVEYLVERYG-NGRFIPAAGTPDRLRYRYWLHYAEGSAMPLLLLKLIFSRLP 119
           LT+AESG I+EYL+ERYG +   +PA+GTP+RLRYRYWLH+AEGSAMP L+++LIF+++P
Sbjct: 61  LTVAESGNIIEYLLERYGAHSGLLPASGTPERLRYRYWLHFAEGSAMPWLVMQLIFAKMP 120

Query: 120 KSVPALIRPVARLICGGMLARMVDPQLKRHLHYLEGELARGGWFAGNSFSAADIQMSFPV 179
           K+VP LIRP+AR++  GM +R+V PQ +R L ++E EL + GWFAG  FS ADIQMSFPV
Sbjct: 121 KAVPTLIRPIARMLAEGMRSRVVAPQQERQLRFMEDELGQQGWFAGAQFSGADIQMSFPV 180

Query: 180 EGARSRGGLDAQYPNLLKYLEAIHARPAYQRALQRGGPYDLLR 222
           E  R+RGGLD +YPNLLKYLEAIHARPAYQRAL++GGPY+LLR
Sbjct: 181 EALRARGGLDGRYPNLLKYLEAIHARPAYQRALEKGGPYELLR 223


>gi|300311872|ref|YP_003775964.1| glutathione S-transferase family
           protein [Herbaspirillum seropedicae SmR1]
          Length = 235

 Score = 68.6 bits (166), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 31/226 (13%)

Query: 2   ITVHHLNNSRSQRVLWLLEELGLEYDIKFYQRDPKTMLAPRELMQVHPLGKSPVITDGD- 60
           I ++ L      +V  +LEE GL Y+      +    ++P E + ++P  K P I D + 
Sbjct: 22  IQLYSLPTPNGVKVSIMLEETGLPYEAHLVSFETNDQMSP-EFLSLNPNNKIPAIIDPNG 80

Query: 61  -----LTIAESGAIVEYLVERYGNGRFIPAAGTPDRLRYRYWLHYAEGSAMPLLLLKLIF 115
                L + ESGAI+ YL E+   G+F+PA     R +   W+ +  G   P+      F
Sbjct: 81  PGGQPLPLFESGAILLYLAEK--TGQFLPADAA-ARYQVIQWVMFQMGGVGPMFGQLGFF 137

Query: 116 SRLPKSVPALIRPVARLICGGMLARMVDPQLKRHLHYLEGELARGGWFAGNSFSAADIQM 175
            R         RP  R +           + KR L  ++  LA+  W  G+++S ADI  
Sbjct: 138 HRFAGKEYEDKRPRDRYVN----------ESKRLLGVMDKRLAQSQWLGGDAYSIADI-A 186

Query: 176 SFP--------VEGARSRGGLDAQYPNLLKYLEAIHARPAYQRALQ 213
           +FP         E A   G  D  +P++ + LEA  ARPA  R L 
Sbjct: 187 TFPWIRNLIGFYEAADLVGFQD--FPHVARALEAFVARPAVVRGLN 230


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.141    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 801,622
Number of extensions: 36081
Number of successful extensions: 98
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 2
Length of query: 222
Length of database: 1,619,870
Length adjustment: 82
Effective length of query: 140
Effective length of database: 1,231,600
Effective search space: 172424000
Effective search space used: 172424000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 129 (54.3 bits)