BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0189.p
         (194 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312650|ref|YP_003776742.1| carbonic anhydrase [Herbaspiril...    74   9e-15

>gi|300312650|ref|YP_003776742.1| carbonic anhydrase [Herbaspirillum
           seropedicae SmR1]
          Length = 212

 Score = 73.9 bits (180), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 9/170 (5%)

Query: 3   LGSQRSPEYFWIGCSDNRVPANDLLGLLPGELFVHRNIANVVVHTDLNCLSV---LQFAV 59
           L + ++P+  +I CSD+R+    +    PG+LFV RN  N+V         V   +++AV
Sbjct: 26  LATGQTPKALFISCSDSRMVPELVTQREPGDLFVIRNAGNIVPSFGPEPGGVSATVEYAV 85

Query: 60  DVLKVKHIIICGHYGCAGVQAALT---KRRVGLADNWLQHVQDVHEKHIGCFHDHMSQGD 116
             LKV  I+ICGH  C  + A  T      +    NWL H      + I     H ++ D
Sbjct: 86  AQLKVSDIVICGHSDCGAMTAVATCACLDHMPAVRNWLHHTDAA--RMINESRPHATEKD 143

Query: 117 QHDRLCELNVLEQVANICRTTIVTDAWERGQELSIHALVYGVHDGLLEAL 166
           + D +   NV+ Q+ NI     V  A  +G+ L++H  VY +  G + AL
Sbjct: 144 RIDGMVRENVIAQLNNIRTHPSVAVALAQGR-LALHGWVYDIESGSILAL 192


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.139    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 597,843
Number of extensions: 21792
Number of successful extensions: 45
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 44
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 1,619,870
Length adjustment: 80
Effective length of query: 114
Effective length of database: 1,241,070
Effective search space: 141481980
Effective search space used: 141481980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 128 (53.9 bits)