BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0154.p
         (215 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309973|ref|YP_003774065.1| glutathione S-transferase [Herb...   376   e-106
gi|300313568|ref|YP_003777660.1| glutathione S-transferase [Herb...   168   3e-43

>gi|300309973|ref|YP_003774065.1| glutathione S-transferase
           [Herbaspirillum seropedicae SmR1]
          Length = 218

 Score =  376 bits (966), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 180/216 (83%), Positives = 198/216 (91%), Gaps = 4/216 (1%)

Query: 1   LRITSKNYSSWSMRGWLLAKFAGLPFQEDIVSPDDPDARAEILLLSSSILVPSLKHGEIF 60
           LRITSKNYSSWS+RGWL+A+FAGL F+EDIV PDDP ARAEILLLSSSILVPSL HG++ 
Sbjct: 6   LRITSKNYSSWSLRGWLMARFAGLSFEEDIVPPDDPSARAEILLLSSSILVPSLHHGDVL 65

Query: 61  VWDTLAIAEYLNEIRPAAKLLPDDQAAARHWXHCRAICGEMHSGFSALRSALPMNLKAHF 120
           VWDTLAIAEYLNEIRPAAKLLP D AA     HCR++CGEMHSGFSALR+ALPMNLK HF
Sbjct: 66  VWDTLAIAEYLNEIRPAAKLLPADLAAR---AHCRSVCGEMHSGFSALRAALPMNLKGHF 122

Query: 121 PNFKVWSRAQADIQRITTIWKECLATYGGPYLFGE-RTMADAMYAPVITRFITYDVKLEP 179
           PNFKVWSRA+ADI RITTIWKECLA YGGP+LFGE RT+ADAMYAPV+TRF+TYDVKL+P
Sbjct: 123 PNFKVWSRAEADIVRITTIWKECLAKYGGPFLFGEQRTVADAMYAPVVTRFMTYDVKLDP 182

Query: 180 ICAAYSKRIMAMPEMKEWIAAAQKEPEDIDELDVEF 215
           IC AY+KRIMAMPEM+EWI AA+KEPEDIDELDVEF
Sbjct: 183 ICTAYAKRIMAMPEMQEWITAAKKEPEDIDELDVEF 218


>gi|300313568|ref|YP_003777660.1| glutathione S-transferase
           [Herbaspirillum seropedicae SmR1]
          Length = 233

 Score =  168 bits (426), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/210 (44%), Positives = 126/210 (60%), Gaps = 10/210 (4%)

Query: 1   LRITSKNYSSWSMRGWLLAKFAGLPFQEDIVSPDDPDARAEILLLSSSILVPSLKHGEIF 60
           L I +KNYSSWSMR W+      +PF+E  +  D  D  AEI   + S  VP L  G+I 
Sbjct: 24  LVIANKNYSSWSMRPWVAMVAFDIPFKEVRLLLDQADTAAEIARYTGSGRVPVLLDGDIA 83

Query: 61  VWDTLAIAEYLNEIRPAAKLLP---DDQAAARHWXHCRAICGEMHSGFSALRSALPMNLK 117
           +WD+L+I EYL E  P   L P   D +A A      R+IC EMHSGF+ LRSA+ M+++
Sbjct: 84  IWDSLSICEYLAEQFPDRHLWPARTDARAIA------RSICAEMHSGFTGLRSAMSMDIR 137

Query: 118 AHFPNFKVWSRAQADIQRITTIWKECLATYG-GPYLFGERTMADAMYAPVITRFITYDVK 176
             +P     + AQADI R+  IW+ECL+ +G   +LFG+ ++ADA YAPV+ RFI+Y V 
Sbjct: 138 GRYPGQGRTAEAQADIARVCEIWEECLSQFGHHDFLFGDFSIADAFYAPVVMRFISYQVP 197

Query: 177 LEPICAAYSKRIMAMPEMKEWIAAAQKEPE 206
           L P   AY+ R+   P +  WIA A  E E
Sbjct: 198 LAPALQAYADRVREHPAVARWIAEALAEKE 227


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.135    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 672,897
Number of extensions: 23645
Number of successful extensions: 67
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 64
Number of HSP's successfully gapped: 2
Length of query: 215
Length of database: 1,619,870
Length adjustment: 81
Effective length of query: 134
Effective length of database: 1,236,335
Effective search space: 165668890
Effective search space used: 165668890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 128 (53.9 bits)