BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0152.p
         (610 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309975|ref|YP_003774067.1| transglutaminase-like superfami...   932   0.0  
gi|300309977|ref|YP_003774069.1| transglutaminase/cysteine prote...    57   4e-09

>gi|300309975|ref|YP_003774067.1| transglutaminase-like superfamily
           domain-containing protein [Herbaspirillum seropedicae
           SmR1]
          Length = 1128

 Score =  932 bits (2409), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/546 (81%), Positives = 483/546 (88%), Gaps = 3/546 (0%)

Query: 1   VRLRPAPHCRTRILSYSLRILPEPHYINWQQDPQANYMARLVFPEKTEEFRIEVDLVAEM 60
           +RLRPAPH RTRILSYSLR+LPEPH+INWQQDP++NY+ARLVFPEKT EF+IEVDLVAEM
Sbjct: 26  IRLRPAPHSRTRILSYSLRVLPEPHFINWQQDPESNYLARLVFPEKTTEFKIEVDLVAEM 85

Query: 61  SVINPFDFFLEPYAEQIPFKYAEELLNELSPYRKTLPLSSDMPRFQKFLDGISREKMNSA 120
           SVINPFDFFLEPYAEQ PF YAE+L NEL PYR+ LPLS   P F +FL  I REK+ SA
Sbjct: 86  SVINPFDFFLEPYAEQFPFDYAEDLQNELLPYRQKLPLS---PLFAQFLQSIPREKVGSA 142

Query: 121 DFLVALNQKLADAVAYTIRMEPGVQTPEETLEIGSGSCRDSSWLLVQLLRHLGLASRFVS 180
           +FLVALNQKLA+ + YTIRMEPGVQTPEETLE+ SGSCRDSSWLLVQLLRHLGLA+RFVS
Sbjct: 143 NFLVALNQKLANHIGYTIRMEPGVQTPEETLELKSGSCRDSSWLLVQLLRHLGLAARFVS 202

Query: 181 GYLIQLTADQKSLDGPSGPEADFTDLHAWCEVYLPGAGWVGLDPTSGLFAGEGHIPLSCT 240
           GYLIQLTADQKSLDGPSGPEADFTDLHAWCEVYLPGAGWVGLDPTSGLFAGEGHIPLSCT
Sbjct: 203 GYLIQLTADQKSLDGPSGPEADFTDLHAWCEVYLPGAGWVGLDPTSGLFAGEGHIPLSCT 262

Query: 241 PEPSSAAPVSGMVDPCEVEFEHSMSVSRFWEAPRVTKPYTEAQWSEIEELGHAIDGDLDA 300
           PEP+SAAPVSG+VDPCEVEFEH MSV R WEAPRVTKPYTE QW++IE+LGHAID DL A
Sbjct: 263 PEPASAAPVSGLVDPCEVEFEHLMSVKRIWEAPRVTKPYTEEQWADIEKLGHAIDADLHA 322

Query: 301 LDVRLTMGGEPTFVSLDHPDEPEWATAALGATKKPLAADLYHRMREKYAVQGLPHFGQGK 360
            DVRLTMGGEPTFVSLDHPDEPEW TAA+G TKKPLAA+LYHRMR KYA QGLPHFGQGK
Sbjct: 323 NDVRLTMGGEPTFVSLDHPDEPEWNTAAMGPTKKPLAAELYHRMRNKYAAQGLPHFGQGK 382

Query: 361 WYPGEQLPRWALNCYWRRDGQPIWHNRDLIGDETTPNVKDDDIPERFLKGVAARLALDGK 420
           WYPGEQLPRWALNCYWRRDG+PIW N  LIGDET PNV D  +   FL  VA RL +DGK
Sbjct: 383 WYPGEQLPRWALNCYWRRDGEPIWLNPALIGDETRPNVSDKIVTSHFLHRVAQRLRVDGK 442

Query: 421 HIFPAYEDVFYYMWRERRLPGNVDPFDSKLDDKQERARLMRVFSQGLDKVAGHVLPVARR 480
           ++FPAYEDVFYYMWRERRLPGNVDPFDS++DDKQER RLM+VF+QGL    GHVLP+AR 
Sbjct: 443 NVFPAYEDVFYYMWRERRLPGNVDPFDSRVDDKQERERLMKVFTQGLQSAVGHVLPLARS 502

Query: 481 PDDLGWQSGDWFLRSERCYLYPGDSPLGYRLPLDSQPWVKSTDYPYVHAADPTQQFAPLT 540
            D  GWQSG WFLRSERCYLYPGDSPLGYRLPLDS PWVK  +YP V+ ADPTQ F PL 
Sbjct: 503 HDGQGWQSGAWFLRSERCYLYPGDSPLGYRLPLDSLPWVKEGEYPAVYPADPTQAFRPLP 562

Query: 541 PASDVR 546
            ++++R
Sbjct: 563 GSAEIR 568


>gi|300309977|ref|YP_003774069.1| transglutaminase/cysteine protease
           [Herbaspirillum seropedicae SmR1]
          Length = 311

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 13/104 (12%)

Query: 156 GSCRDSSWLLVQLLRHLGLASRFVSGYLIQLTADQKSLDGPSGPEADFTDL-HAWCEVYL 214
           G C+D + L++  LR +GLA+R+VSGYL+       +   P  P     D  HAW  VY 
Sbjct: 188 GVCQDFAHLMLSCLRSIGLAARYVSGYLL-------TEPPPGQPRLIGADASHAWVSVYC 240

Query: 215 PGAG-----WVGLDPTSGLFAGEGHIPLSCTPEPSSAAPVSGMV 253
           PG       W+  DPT+G+F    HI L    +    +P+ G++
Sbjct: 241 PGVNGAEGSWIDADPTNGVFPDTSHITLGWGRDFLDISPLRGVL 284


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.137    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,058,404
Number of extensions: 97704
Number of successful extensions: 213
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 210
Number of HSP's successfully gapped: 2
Length of query: 610
Length of database: 1,619,870
Length adjustment: 91
Effective length of query: 519
Effective length of database: 1,188,985
Effective search space: 617083215
Effective search space used: 617083215
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 133 (55.8 bits)