BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0107.p
         (241 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309994|ref|YP_003774086.1| tellurium resistance membrane p...   308   3e-85

>gi|300309994|ref|YP_003774086.1| tellurium resistance membrane
           protein [Herbaspirillum seropedicae SmR1]
          Length = 241

 Score =  308 bits (788), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 175/241 (72%), Positives = 213/241 (88%), Gaps = 1/241 (0%)

Query: 1   MEFLAELNWLAVGQIILIDILLGGDNAIVIALACRNLPDNLRLRGILWGTFGAIAIRIVL 60
           MEFLA LNW+AV QIILIDILLGGDNAIVIALACRNLPD LR++GI+WGT GAIAIRI L
Sbjct: 1   MEFLANLNWIAVVQIILIDILLGGDNAIVIALACRNLPDKLRMKGIVWGTVGAIAIRIAL 60

Query: 61  IAFAVTLLQMPFIKLVGGVLLFWIGTKLLSDDDGHGEISGSDKLLSAIKTIVVADLVMSL 120
           I+FAVT+LQ+P++KLVGGVLL WIG KLL++D+ H E+ GSD+L  A+KT++VADLVMSL
Sbjct: 61  ISFAVTMLQLPYLKLVGGVLLLWIGIKLLNEDEDHAEVDGSDRLWGAVKTVIVADLVMSL 120

Query: 121 DNVIAIASAAEQAAGEHQLLLVIFGILVSIPIIVWGSTLVLKLMEKVPLIITLGAALLGY 180
           DNVIAIASAAEQAAGEH+L+LV+FGI+VSIPIIVWGSTLVLKLME+ P+I+TLGAALLGY
Sbjct: 121 DNVIAIASAAEQAAGEHRLMLVVFGIVVSIPIIVWGSTLVLKLMERFPVIVTLGAALLGY 180

Query: 181 LAGGMIISDVAIKDWVQTYLPHHEFVMPGMQLHLSLPGMVGAIGVVVVGNWLARRARKQA 240
           +AGGMI SD AI+  ++ ++   EF++PG  +HLSLPG+VGA+GVV++G  L RR R+Q 
Sbjct: 181 IAGGMIFSDGAIQGLLRDFIDQTEFLVPGASVHLSLPGLVGALGVVLIGLSLKRR-RQQL 239

Query: 241 A 241
           A
Sbjct: 240 A 240


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.327    0.144    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 567,378
Number of extensions: 17505
Number of successful extensions: 115
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 158
Effective length of database: 1,226,865
Effective search space: 193844670
Effective search space used: 193844670
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 129 (54.3 bits)