BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0102.p
         (316 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309999|ref|YP_003774091.1| hydrolase of the alpha/beta-hyd...   513   e-146

>gi|300309999|ref|YP_003774091.1| hydrolase of the
           alpha/beta-hydrolase fold protein [Herbaspirillum
           seropedicae SmR1]
          Length = 330

 Score =  513 bits (1320), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 254/316 (80%), Positives = 278/316 (87%)

Query: 1   MQYIAPRWLPGGNLQTIYPSTFIAKPPVRFRRERWDTPDDDFIDVDFVDGQPGQPLVVLF 60
           M YI PRWLPGG+LQTIYPSTF+ KP V +RRERW+ PD DFID+DFVDGQPG+PLVVLF
Sbjct: 1   MLYIPPRWLPGGHLQTIYPSTFVRKPTVAYRRERWEAPDGDFIDIDFVDGQPGRPLVVLF 60

Query: 61  HGLEGSSDSHYCRALMAAVAARGWTGVVPHFRGCSGEINLAPRFYHSGDSSELDWILRRL 120
           HGLEGSSDSHY RALMA VA RGW G +PHFRGCSGEINLAPRFYHSGDS+ELDWI+RRL
Sbjct: 61  HGLEGSSDSHYSRALMAEVARRGWHGAIPHFRGCSGEINLAPRFYHSGDSAELDWIIRRL 120

Query: 121 GTHRAAIGAGKFYATGVSLGANALLRWLGESQHQAEFIDAACAVSAPLDLAGGGAALAHG 180
              +  + A  FYA GVSLGANALLRWLGESQHQAE +DAACAVSAPLDLAGGGAAL  G
Sbjct: 121 KLRQQDLAATHFYACGVSLGANALLRWLGESQHQAEILDAACAVSAPLDLAGGGAALGAG 180

Query: 181 FNRIYSHVFLRTMRPKCLVKLDQFPGLFSRDALLQARDLYTFDNIVTAPLHGYRNTEDYW 240
           FNR+Y+ VFLRTMRPKCL KLDQFPGLF R+ALL ARDLY FDNIVTAPLHGYRNTEDYW
Sbjct: 181 FNRLYTWVFLRTMRPKCLAKLDQFPGLFDREALLSARDLYAFDNIVTAPLHGYRNTEDYW 240

Query: 241 DRASAKHILHDITVPTLVLNAKNDPFLPPQYLPKSAAACVKLEYPEEGGHVGFPTGAPPG 300
           DRASAKHILHDITVPTLVLNA+NDPFLP Q+LP++AA  V L+YPE+GGHVGF  G PPG
Sbjct: 241 DRASAKHILHDITVPTLVLNARNDPFLPEQHLPRTAAPEVVLDYPEQGGHVGFAAGGPPG 300

Query: 301 DLGWLPQRMLHFLEGK 316
            L WLP+R+LHFLEG+
Sbjct: 301 RLDWLPRRLLHFLEGR 316


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.141    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,043,556
Number of extensions: 41841
Number of successful extensions: 119
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 119
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 231
Effective length of database: 1,217,395
Effective search space: 281218245
Effective search space used: 281218245
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)