BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0093.p
         (354 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310007|ref|YP_003774099.1| fructose-1,6-bisphosphate aldol...   690   0.0  

>gi|300310007|ref|YP_003774099.1| fructose-1,6-bisphosphate aldolase
           [Herbaspirillum seropedicae SmR1]
          Length = 354

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/354 (94%), Positives = 342/354 (96%)

Query: 1   MPLVSMRQLLDHAAENGYGLPAFNVNNLEQVTAIMQAADEVGAPVIMQASAGARKYAGEA 60
           MPLVSMRQLLDHAAENGYGLPAFNVNNLEQVTAIM+AA+EVGAPVIMQASAGARKYAGEA
Sbjct: 1   MPLVSMRQLLDHAAENGYGLPAFNVNNLEQVTAIMEAANEVGAPVIMQASAGARKYAGEA 60

Query: 61  FLRHLIEAAVEAYPHIPVVMHQDHGQSPAVCMAAIKSGFTSVMMDGSLMEDGKSVASYEY 120
           FLRHLI AAVEAYPHIPVVMHQDHGQSPAVCMAAIKSGF+SVMMDGSL  DGK+VASYEY
Sbjct: 61  FLRHLISAAVEAYPHIPVVMHQDHGQSPAVCMAAIKSGFSSVMMDGSLEADGKTVASYEY 120

Query: 121 NVEVSRKVVEFSHAIGVTVEAELGVLGSLETMMGDKEDGHGADGKMTREQLLTDVAQAAD 180
           NVEVSRKVVEFSHAIGVTVEAELGVLGSLETM GDKEDGHGADG MTREQLLTDV QAAD
Sbjct: 121 NVEVSRKVVEFSHAIGVTVEAELGVLGSLETMKGDKEDGHGADGTMTREQLLTDVNQAAD 180

Query: 181 FVKQTQCDALAIAIGTSHGAYKFSRKPTGDILAIDRIKEIHARIPNTHLVMHGSSSVPQE 240
           FVK TQCDALAIAIGTSHGAYKFSRKPTGDILAIDRIKEIHARIPNTHLVMHGSSSVPQE
Sbjct: 181 FVKATQCDALAIAIGTSHGAYKFSRKPTGDILAIDRIKEIHARIPNTHLVMHGSSSVPQE 240

Query: 241 LLAEIRQFGGDMKETYGVPVEEIQEGIKHGVRKINIDTDIRLAMTGAIRRYLMENPGKFD 300
           LLAEIR+FGGDMKETYGVPVEEIQEGIKHGVRKINIDTDIRLAMTGAIRRYL ENP KFD
Sbjct: 241 LLAEIREFGGDMKETYGVPVEEIQEGIKHGVRKINIDTDIRLAMTGAIRRYLFENPSKFD 300

Query: 301 PRDYLKPAREAAKLVCKARYLSFGCEGQAGKIKAVPLEKIAEKYKKGELSQIVQ 354
           PRDYLKPAREAAKLVCKAR+LSFGCEGQAGKIK + LEKIAEKYK GEL+QIVQ
Sbjct: 301 PRDYLKPAREAAKLVCKARFLSFGCEGQAGKIKPISLEKIAEKYKSGELAQIVQ 354


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.317    0.133    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,110,007
Number of extensions: 46134
Number of successful extensions: 182
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 182
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 268
Effective length of database: 1,212,660
Effective search space: 324992880
Effective search space used: 324992880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)