BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0084.p
         (381 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310016|ref|YP_003774108.1| cyclopropane-fatty-acyl-phospho...   639   0.0  
gi|300310389|ref|YP_003774481.1| cyclopropane-fatty-acyl-phospho...   170   2e-43

>gi|300310016|ref|YP_003774108.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 407

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/378 (78%), Positives = 336/378 (88%)

Query: 1   LRLELWNGRQFDFSDNAPQVTLRVPHVSALPYLFRPSLSNLGEAYVEGKIDVDGPVASII 60
           LRL LWNG+Q+DF    P+VTL+VPH SA+  L  PSL+NLGEAYVEGKI+V+G V SII
Sbjct: 28  LRLVLWNGQQYDFGSGTPEVTLKVPHASAITSLLTPSLANLGEAYVEGKIEVEGKVKSII 87

Query: 61  NVANLLAAKTLKAEGKLSRIVRTVRHSKEKDAEAIRYHYDVSNEFYKLFLDENMVYSCAY 120
            VAN LA+ TLKAEG+L R+VR+V H++++DAEAI+YHYDVSN+FYKLFLDE+MVYSCAY
Sbjct: 88  QVANSLASNTLKAEGRLGRMVRSVTHTRKRDAEAIQYHYDVSNDFYKLFLDEHMVYSCAY 147

Query: 121 FENGDEDLATAQIKKIDHILTKIKVRPGDRLLDIGCGWGALVLRAAQKFGAQCVGVTLSE 180
           FENGDEDLATAQIKKIDHIL KI++RPG  LLDIGCGWGALVLRAAQK+GA+CVGVTLS 
Sbjct: 148 FENGDEDLATAQIKKIDHILEKIQLRPGQTLLDIGCGWGALVLRAAQKYGARCVGVTLSR 207

Query: 181 NQYALARERVEKAGLSDRIEIRLQDYRDVTGTFDRITSVGMFEHVGLKNLPLYFSHINAL 240
           NQYALARERVE AGLSDRIEIRLQDYRDVTG+FDRITSVGMFEHVG+KNLP YF+ I  L
Sbjct: 208 NQYALARERVEAAGLSDRIEIRLQDYRDVTGSFDRITSVGMFEHVGIKNLPSYFAQIRKL 267

Query: 241 LADDGLVMNHGITSTDIENGESPYGGGEFVDKYVFPAGELPHVSLVLKTMQQGGLEVFDV 300
           LAD G+ MNHGITSTDIENGESPYG GEF+DKYVFPAGELPH+S VLKTMQ+GGLE FDV
Sbjct: 268 LADGGMAMNHGITSTDIENGESPYGAGEFIDKYVFPAGELPHISTVLKTMQEGGLEAFDV 327

Query: 301 ENLRRHYARTCAIWADNFEARSEEIKKLTDEKRYRIWRVYLAGSSHGFDKDWISLYQVVC 360
           ENLRRHYARTC IWADNFEA +E I ++TDEK YRIWRVYLAGS++GF++DWISLYQVVC
Sbjct: 328 ENLRRHYARTCGIWADNFEANTEAIHRVTDEKHYRIWRVYLAGSAYGFERDWISLYQVVC 387

Query: 361 GKANRPAAALPQSRRYIY 378
            KA R A  LP SR+YIY
Sbjct: 388 TKAGRSAQQLPWSRQYIY 405


>gi|300310389|ref|YP_003774481.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 403

 Score =  170 bits (430), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 174/368 (47%), Gaps = 17/368 (4%)

Query: 7   NGRQFDFSD--NAPQVTLRVPHVSALPYLFRPSLSNLGEAYVEGKIDVDGPVASIINVA- 63
           +G    F D    P   LR+    A   + R      GEAY  G +D    +A+++ +A 
Sbjct: 40  HGTTLTFGDLRQPPSAQLRILDWRACGAILRAGDIGFGEAYGHGWVDTP-DLAALLRLAM 98

Query: 64  -NLLAAKTLKAEGKLSRIVRTVRH-----SKEKDAEAIRYHYDVSNEFYKLFLDENMVYS 117
            N     +    G L+     +RH     ++      I  HYD+ N+FY+L+LD  M YS
Sbjct: 99  RNRQVLSSAVEGGWLASWWYRLRHLLRSNTRSGSRRNIHAHYDLGNDFYRLWLDPTMSYS 158

Query: 118 CAYFENGDEDLATAQIKKIDHILTKIKVRPGDRLLDIGCGWGALVLRAAQKFGAQCVGVT 177
            A F    + L  AQ  K   I+ ++ +R GDR+L+IGCGWG     AA + G +  GVT
Sbjct: 159 SAIFSAPGQSLEQAQAAKYQRIVDQLGLRAGDRVLEIGCGWGGFAEHAA-RLGIRVHGVT 217

Query: 178 LSENQYALARERVEKAGLSDRIEIRLQDYRDVTGTFDRITSVGMFEHVGLKNLPLYFSHI 237
           +S  Q A A+ER+    L     + L DYRD+ G +D I S+ MFE VG +    YF  +
Sbjct: 218 ISPAQLAYAQERMRTQQLDHLAHLELCDYRDLDGQYDAIVSIEMFEAVGERFWQTYFDTV 277

Query: 238 NALLADDGLVMNHGITSTDIENG--ESPYGGGEFVDKYVFPAGELPHVSLVLKTMQQGGL 295
            A L   G  +   I S  IE    E      +F+ +++FP G LP      +  Q+ GL
Sbjct: 278 CARLKAGGQAL---IQSITIEEAVFERYRDSADFIREFIFPGGMLPSHERFSRCAQRAGL 334

Query: 296 EVFDVENLRRHYARTCAIWADNFEARSEEI-KKLTDEKRYRIWRVYLAGSSHGFDKDWIS 354
              +  +  R YA T   W D+F A+ E I  +  DE+  R+W++Y      GFD+    
Sbjct: 335 ATRERFHFGRDYAETLRRWHDSFLAQRETIAAQGFDERFRRLWQLYYVFCEVGFDEGQTD 394

Query: 355 LYQVVCGK 362
           + Q +  K
Sbjct: 395 VVQFLLHK 402


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.138    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,215,072
Number of extensions: 50836
Number of successful extensions: 133
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 130
Number of HSP's successfully gapped: 2
Length of query: 381
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 294
Effective length of database: 1,207,925
Effective search space: 355129950
Effective search space used: 355129950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)