BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0050.p
         (250 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310049|ref|YP_003774141.1| 1-acyl-sn-glycerol-3-phosphate ...   405   e-114

>gi|300310049|ref|YP_003774141.1| 1-acyl-sn-glycerol-3-phosphate
           acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 267

 Score =  405 bits (1041), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 189/242 (78%), Positives = 216/242 (89%)

Query: 1   LRINLFLRSVLFTLVMTVTTVVWSMACILFAPFPYARRYYLTSRWNVIVIWAARVICGIR 60
           LR+ L LRSV+F  +M V T++WS AC+L APFPYA+RY+ TSRWNV VIW ARVICGIR
Sbjct: 6   LRLVLILRSVVFMALMAVATIIWSFACLLSAPFPYAQRYWWTSRWNVFVIWTARVICGIR 65

Query: 61  YQVKGMENLPDAPVILLSKHQSAWETIFYLIIMPRPLVFVFKKELTYIPFFGWGIALLRM 120
           Y+++G ENLPDAPVILLSKHQSAWETIFY+I MPRPLVFVFKKELTY+PFFGWGIALLRM
Sbjct: 66  YEIRGAENLPDAPVILLSKHQSAWETIFYVINMPRPLVFVFKKELTYVPFFGWGIALLRM 125

Query: 121 IPIDRSKGRDAFAQVVVQGRKRLADGQWVIMFPEGTRIPVGQTGKYKHGGSRLAVETNTV 180
           IPIDR KGRDAFAQV+  G +RL DGQW++MFPEGTR  VG  GKYK GGSRLAVETNT+
Sbjct: 126 IPIDRKKGRDAFAQVLEHGTRRLRDGQWIMMFPEGTRTTVGSQGKYKAGGSRLAVETNTL 185

Query: 181 VVPVAVNAGECWPKGSFIKTPGMITVSIGKPISPEGLDPAQLSQRVENWIESEMRVISPA 240
           VVP+A+N+G+CWPKGSFIK PG+ITVSIGKPISPEGL+P +L++RVENWIESEMRVISP 
Sbjct: 186 VVPIAMNSGQCWPKGSFIKKPGLITVSIGKPISPEGLNPQELNERVENWIESEMRVISPD 245

Query: 241 VY 242
           VY
Sbjct: 246 VY 247


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.326    0.140    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 728,774
Number of extensions: 27876
Number of successful extensions: 90
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 93
Number of HSP's successfully gapped: 2
Length of query: 250
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 167
Effective length of database: 1,226,865
Effective search space: 204886455
Effective search space used: 204886455
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 129 (54.3 bits)