BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0188.p (510 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [H... 614 e-177 gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 425 e-120 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 408 e-115 gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [H... 362 e-101 gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase... 352 6e-98 >gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 506 Score = 614 bits (1583), Expect = e-177, Method: Compositional matrix adjust. Identities = 308/501 (61%), Positives = 370/501 (73%), Gaps = 5/501 (0%) Query: 4 ILELQGICKQFGQVNALNGVDLAVASGEIHALLGENGAGKSTLMKILSGIYRPDRGRIMV 63 +L+L GI K FG V L GVDL V +GE+HALLGENGAGKSTLMKIL GI RPD G I + Sbjct: 5 MLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRI 64 Query: 64 DGEERHFASYRDAIKAGIAIIFQEFSLVPYLSAVENMFLGREMRNAFGLLSRAAMRRRAE 123 DG+ F SYR AI G+ ++FQEFSL+PYL AV+NMFL RE+R+ +G L RAAMRRRA+ Sbjct: 65 DGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWGWLQRAAMRRRAQ 124 Query: 124 AIFQRLGVTIDLSTEVGRLSLAQQQFVEIGKALSLEARILILDEPTATLTPAEAAHLFTV 183 I +LGV I L V +LS+AQQQFVEI KAL+L+ARIL+LDEPTATLTPAE HLF V Sbjct: 125 EIIGQLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAV 184 Query: 184 MRELKRLGVAMIFISHHMEEIFEVCDRVTVLRDGAYVGSAEVAATTVDDLVEMMVGRRLQ 243 MR L+ GVA+IFISHH+EEIFE+CDR+TVLRDGAYV + A LVEMMVGRR++ Sbjct: 185 MRSLRAQGVAIIFISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVGRRIE 244 Query: 244 NTFPPKAVGPSTSMAPALXKAVGPSTSAIQLRRDGPVNRFQLREGEILGFAGLVGSGRTE 303 N FPPK + + A+QLRR PV++FQLR GEILGFAGLVGSGRTE Sbjct: 245 NCFPPKPAKGGEGEGEVVLE-----VHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTE 299 Query: 304 LALGLIGADPCHRKEVSVHGVPMALRDPAEALAAGIGLLPESRKTEGLILDFSIKDNISL 363 L ++GA ++S+HGVP+ DPA+AL AGIGLLPESRK +GLI FSI N+SL Sbjct: 300 TVLAMLGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSL 359 Query: 364 NNLQKYCSTLPFIRRGAEREDAQCMSRDIDIKAPDVFARVGNLSGGNQQKVVIARWLNHH 423 NN KY F+ R E++ + + + +KAP RV LSGGNQQKVVIARW+NH Sbjct: 360 NNYGKYRLGGLFLDRRREQQATEAAMQRVRVKAPGAQVRVDTLSGGNQQKVVIARWINHA 419 Query: 424 CKILIFDEPTRGIDVGAKAEIYRLMRRLTVQGYAIIMISSELPEIVGMCDRVAVFRQGAI 483 K+LIFDEPTRGIDVGAK+EIY+LMR T QGY+I+MISSELPE+VGM DRV VFR G I Sbjct: 420 MKVLIFDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFRGGGI 479 Query: 484 VTILEGDSIQSNEVMRHATTG 504 V LEG+++ + E+M HATTG Sbjct: 480 VATLEGEAVNAEEIMTHATTG 500 Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 6/221 (2%) Query: 30 GEIHALLGENGAGKSTLMKILSGIYRPDRGRIMVDGEERHFASYRDAIKAGIAII---FQ 86 GEI G G+G++ + + G + ++ + G FA A++AGI ++ + Sbjct: 284 GEILGFAGLVGSGRTETVLAMLGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRK 343 Query: 87 EFSLVPYLSAVENMFLGREMRNAFG--LLSRAAMRRRAEAIFQRLGVTI-DLSTEVGRLS 143 E L+ S + N+ L + G L R ++ EA QR+ V V LS Sbjct: 344 EQGLITSFSILHNVSLNNYGKYRLGGLFLDRRREQQATEAAMQRVRVKAPGAQVRVDTLS 403 Query: 144 LAQQQFVEIGKALSLEARILILDEPTATLTPAEAAHLFTVMRELKRLGVAMIFISHHMEE 203 QQ V I + ++ ++LI DEPT + + ++ +MRE G +++ IS + E Sbjct: 404 GGNQQKVVIARWINHAMKVLIFDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPE 463 Query: 204 IFEVCDRVTVLRDGAYVGSAEVAATTVDDLVEMMVGRRLQN 244 + + DRV V R G V + E A ++++ R+++ Sbjct: 464 VVGMADRVCVFRGGGIVATLEGEAVNAEEIMTHATTGRIRH 504 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 425 bits (1092), Expect = e-120, Method: Compositional matrix adjust. Identities = 231/502 (46%), Positives = 328/502 (65%), Gaps = 14/502 (2%) Query: 4 ILELQGICKQFGQVNALNGVDLAVASGEIHALLGENGAGKSTLMKILSGIYRPDRGRIMV 63 ++ L+ +CK+F V AL+ +A+GE+HAL+GENGAGKSTLMKILSG+Y+ D G I++ Sbjct: 22 VIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILL 81 Query: 64 DGEERHFASYRDAIKAGIAIIFQEFSLVPYLSAVENMFLGREMRNAFGL-LSRAAMRRRA 122 DG+ R A GI II QE +L+ +LSA +N+F+GRE R A GL + + R+A Sbjct: 82 DGKPVEITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQA 141 Query: 123 EAIFQRLGVTIDLSTEVGRLSLAQQQFVEIGKALSLEARILILDEPTATLTPAEAAHLFT 182 AIF R+ + +D ST VG L++A+QQ VEI KALS ++R+LI+DEPTA L AE A LF Sbjct: 142 AAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFR 201 Query: 183 VMRELKRLGVAMIFISHHMEEIFEVCDRVTVLRDGAYVGSAEVAATTVDDLVEMMVGRRL 242 ++R+L+ GV +++ISH M+E+ ++ DRV+V+RDG Y+ + + T++D ++ MMVGR L Sbjct: 202 IIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRAL 261 Query: 243 QNTFPPKAVGPSTSMAPALXKAVGPSTSAIQLRRDGPVN--RFQLREGEILGFAGLVGSG 300 + + P TS + + G L R + F LR+GEILGFAGL+G+G Sbjct: 262 DGE---QRIPPDTSRNDVVLEVRG-------LNRGRAIRDVSFTLRKGEILGFAGLMGAG 311 Query: 301 RTELALGLIGADPCHRKEVSVHGVPMALRDPAEALAAGIGLLPESRKTEGLILDFSIKDN 360 RTE+A + GADP E+ +HG ++ PA+A+A GIG L E RK GL + ++ N Sbjct: 312 RTEVARAIFGADPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQAN 371 Query: 361 ISLNNLQKYCSTLPFIRRGAEREDAQCMSRDIDIKAPDVFARVGNLSGGNQQKVVIARWL 420 I+L+++ ++ + + F+ + A RE AQ R + IK P V + LSGGNQQK+VIA+WL Sbjct: 372 IALSSMGRF-TRVGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWL 430 Query: 421 NHHCKILIFDEPTRGIDVGAKAEIYRLMRRLTVQGYAIIMISSELPEIVGMCDRVAVFRQ 480 C IL FDEPTRGIDVGAK+EIY+L+ L QG AI+MISSELPE++ M RV V + Sbjct: 431 LRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCE 490 Query: 481 GAIVTILEGDSIQSNEVMRHAT 502 G I L ++M+ AT Sbjct: 491 GRITGELARADATQEKIMQLAT 512 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 408 bits (1048), Expect = e-115, Method: Compositional matrix adjust. Identities = 219/501 (43%), Positives = 318/501 (63%), Gaps = 10/501 (1%) Query: 4 ILELQGICKQFGQVNALNGVDLAVASGEIHALLGENGAGKSTLMKILSGIYRPDRGRIMV 63 +L+++GI K FG AL+ + L + GEIHAL+GENGAGKSTLMK+LSG++ PD+G I++ Sbjct: 6 LLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILL 65 Query: 64 DGEERHFASYRDAIKAGIAIIFQEFSLVPYLSAVENMFLGREMRNAFGLLSRAAMRRRAE 123 DG + AGI +I+QE ++ P +S N+F+G E+R GL+ AAMR R + Sbjct: 66 DGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRTD 125 Query: 124 AIFQRLGVTIDLSTEVGRLSLAQQQFVEIGKALSLEARILILDEPTATLTPAEAAHLFTV 183 A+ ++LG S GRLS+A+QQ VEI +AL +RI+I+DEPTA L+ E LF V Sbjct: 126 AVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNV 185 Query: 184 MRELKRLGVAMIFISHHMEEIFEVCDRVTVLRDGAYVGSAEVAATTVDDLVEMMVGRRLQ 243 +R L+ G+A+I+ISH M E++ + DRVTVLRDG++VG + +V+MMVGR L Sbjct: 186 VRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMVGRSLS 245 Query: 244 NTFPPKAVGPSTSMAPALXKAVGPSTSAIQLRRDGPVN--RFQLREGEILGFAGLVGSGR 301 + + + P+ + A P+ ++ G + F +R GE+LGFAGLVG+GR Sbjct: 246 EFYQHQRIAPADA-------AQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGR 298 Query: 302 TELALGLIGADPCHRKEVSVHGVPMALRDPAEALAAGIGLLPESRKTEGLILDFSIKDNI 361 TELA L GADP ++ + G P+ + P A+ AGI +PE RK +GL L ++ N Sbjct: 299 TELARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANA 358 Query: 362 SLNNLQKYCSTLPFIRRGAEREDAQCMSRDIDIKAPDVFARVGNLSGGNQQKVVIARWLN 421 ++N ++ + L +R + A+ + +++K VG LSGGNQQKV++ARWL Sbjct: 359 TMNVASRH-TRLGLVRSRSLGGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLE 417 Query: 422 HHCKILIFDEPTRGIDVGAKAEIYRLMRRLTVQGYAIIMISSELPEIVGMCDRVAVFRQG 481 K+LI DEPTRG+D+ AK+EIY+L+ RL QG A+++ISSELPE++G+CDRV V R+G Sbjct: 418 IAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREG 477 Query: 482 AIVTILEGDSIQSNEVMRHAT 502 I L G +I +MR AT Sbjct: 478 MITGELAGAAITQENIMRLAT 498 Score = 99.4 bits (246), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 11/255 (4%) Query: 16 QVNALNGVDLAVAS-----GEIHALLGENGAGKSTLMKILSGIYRPDRGRIMVDGEERHF 70 QV AL G + AS GE+ G GAG++ L ++L G G I+++G H Sbjct: 266 QVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTELARLLFGADPRSGGDILLEGRPVHI 325 Query: 71 ASYRDAIKAGIAIIFQEFS---LVPYLSAVENMFLGREMRNA-FGLLSRAAMRRRAEAIF 126 R A++AGIA + ++ L ++ N + R+ GL+ ++ A A Sbjct: 326 DQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNVASRHTRLGLVRSRSLGGVARAAI 385 Query: 127 QRLGVTI-DLSTEVGRLSLAQQQFVEIGKALSLEARILILDEPTATLTPAEAAHLFTVMR 185 QRL V + T VG+LS QQ V + + L + ++LILDEPT + + ++ ++ Sbjct: 386 QRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVH 445 Query: 186 ELKRLGVAMIFISHHMEEIFEVCDRVTVLRDGAYVGSAEVAATTVDDLVEMMVGRRLQNT 245 L GVA++ IS + E+ +CDRV V+R+G G AA T ++++ + + T Sbjct: 446 RLASQGVAVVVISSELPEVIGICDRVLVMREGMITGELAGAAITQENIMRLATDTNVPRT 505 Query: 246 FPPKAVGPSTSMAPA 260 P P T +AP+ Sbjct: 506 APASHSSP-TPLAPS 519 Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 10/229 (4%) Query: 283 FQLREGEILGFAGLVGSGRTELALGLIGADPCHRKEVSVHGVPMALRDPAEALAAGIGLL 342 +R GEI G G+G++ L L G + E+ + G P+ALRDP + AAGI L+ Sbjct: 27 LTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILLDGRPVALRDPGASRAAGINLI 86 Query: 343 PESRKTEGLILDFSIKDNISLNNLQKYCSTLPFIRRGAEREDAQCMSRDID--IKAPDVF 400 + + + S+ N+ + + + + L I A R + R + A D+ Sbjct: 87 YQEL---AVAPNISVAANVFMGS--ELRTRLGLIDHAAMRSRTDAVLRQLGAGFGASDL- 140 Query: 401 ARVGNLSGGNQQKVVIARWLNHHCKILIFDEPTRGIDVGAKAEIYRLMRRLTVQGYAIIM 460 G LS QQ+V IAR L H +I+I DEPT + +++ ++RRL +G AII Sbjct: 141 --AGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVVRRLRDEGLAIIY 198 Query: 461 ISSELPEIVGMCDRVAVFRQGAIVTILEGDSIQSNEVMRHATTGSRLEF 509 IS + E+ + DRV V R G+ V L D I S +++ S EF Sbjct: 199 ISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMVGRSLSEF 247 >gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 546 Score = 362 bits (928), Expect = e-101, Method: Compositional matrix adjust. Identities = 209/493 (42%), Positives = 292/493 (59%), Gaps = 24/493 (4%) Query: 4 ILELQGICKQFGQVNALNGVDLAVASGEIHALLGENGAGKSTLMKILSGIYRPDRGRIMV 63 +L L GI K+F V AL V V GE+ ALLGENGAGKSTL+KIL+GI++PD G I + Sbjct: 35 VLSLSGIGKRFQGVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGIHQPDEGSIHL 94 Query: 64 DGEERHFASYRDAIKAGIAIIFQEFSLVPYLSAVENMFLGREMRNAFGLLSRAAMRR--- 120 G E FAS +DA++ GI + QE + LS EN+++GR+ G R RR Sbjct: 95 GGREVRFASAQDAMRGGITAVHQETVMFEELSVAENIWIGRQ--PLCGTPRRIDWRRMED 152 Query: 121 RAEAIFQRLGVTIDLSTEVGRLSLAQQQFVEIGKALSLEARILILDEPTATLTPAEAAHL 180 A A+F RL V + + V LS+AQ+ FVEI +ALS +A+++I+DEPTA L+ E L Sbjct: 153 EARALFARLEVDLPVRARVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIGEL 212 Query: 181 FTVMRELKRLGVAMIFISHHMEEIFEVCDRVTVLRDGAYVGSAEVAATTVDDLVEMMVGR 240 + ++ +L+R G A+IFISH +EI+ V DR TVLRDG ++ S E+A T LV +MVGR Sbjct: 213 YRIIGQLRRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQLVALMVGR 272 Query: 241 RLQNTFPPKAVGPSTSMAPALXKAVGPSTSAIQLRRDGPVNRFQLREGEILGFAGLVGSG 300 + F A AP L + + F +R GEILGF GLVG+G Sbjct: 273 EVGQVFSRAASNTEDQTAPVL------EVKHLSHPSEFDDVSFAVRPGEILGFYGLVGAG 326 Query: 301 RTELALGLIGADPCHRKEVSVHGVPMALRDPAEALAAGIGLLPESRKTEGLILDFSIKDN 360 R+E+ L G P + V + G + L PA+A+A G+ +PE R+ +G +L I N Sbjct: 327 RSEVMHALFGLSPEAQGAVWIDGREVKLCSPAQAIAHGLAYVPEDRQRQGALLSLPIFQN 386 Query: 361 ISLNNLQKYCSTLP----FIRRGAERE--DAQCMSRDIDIKAPDVFARVGNLSGGNQQKV 414 I+L LP F+RR RE A+ + +++KA V LSGGNQQKV Sbjct: 387 ITL-------PVLPGIGFFLRRHRRREIDIARRLCEQLELKASHFHQHVAQLSGGNQQKV 439 Query: 415 VIARWLNHHCKILIFDEPTRGIDVGAKAEIYRLMRRLTVQGYAIIMISSELPEIVGMCDR 474 V+A+WL ++LI DEPT+GID+G+KA ++R + L QG A+I++SSELPE++GM DR Sbjct: 440 VLAKWLATQPRVLILDEPTKGIDIGSKAAVHRFIGELVAQGLAVILVSSELPEVMGMSDR 499 Query: 475 VAVFRQGAIVTIL 487 + V QG + + Sbjct: 500 IVVMHQGRVQQVF 512 >gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 352 bits (902), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 208/498 (41%), Positives = 298/498 (59%), Gaps = 15/498 (3%) Query: 4 ILELQGICKQFGQVNALNGVDLAVASGEIHALLGENGAGKSTLMKILSGIYRPD--RGRI 61 +LE++GI K FG V ALNG+D+ + GE L GENGAGKSTLMKILSG+Y G I Sbjct: 5 LLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEI 64 Query: 62 MVDGEERHFASYRDAIKAGIAIIFQEFSLVPYLSAVENMFLGREMRNAFGLLSRAAMRRR 121 + DG+ S RD AGI II QE LVP LS EN+F+G E+ G ++ AM RR Sbjct: 65 LWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPAMYRR 124 Query: 122 AEAIFQRLGV-TIDLSTEVGRLSLAQQQFVEIGKALSLEARILILDEPTATLTPAEAAHL 180 AE + + L + I+++ V + QQ VEI KAL+ +AR+LILDEP+++LT +E L Sbjct: 125 AEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIGVL 184 Query: 181 FTVMRELKRLGVAMIFISHHMEEIFEVCDRVTVLRDGAYVGSAEVAATTVDDLVEMMVGR 240 ++++LK GVA ++ISH ++E+ EVCD ++V+RDG ++ + + VD ++ MVGR Sbjct: 185 LKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQMVGR 244 Query: 241 RLQNTFPPKAVGPSTSMAPALXKAVGPSTSAIQLRRDGPVN--RFQLREGEILGFAGLVG 298 + +P + + ++ + +A + I R V+ F +R GEILG AGLVG Sbjct: 245 EITAMYPER----NHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVG 300 Query: 299 SGRTELALGLIGADPC-HRKEVSVHGVPMALRDPAEALAAGIGLLPESRKTEGLILDFSI 357 +GRTEL + GA + +V + G P P +++ G+ ++PE RK G++ D + Sbjct: 301 AGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDV 360 Query: 358 KDNISLNNLQKYCSTLPFIRRGAEREDAQCMSRDIDIKAPDVFARVGNLSGGNQQKVVIA 417 NI+L L ++ S I AE + Q + +K F + +LSGGNQQK V+A Sbjct: 361 GQNITLTVLNRF-SRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGNQQKAVLA 419 Query: 418 RWLNHHCKILIFDEPTRGIDVGAKAEIYRLMRRLTVQGYAIIMISSELPEIVGMCDRVAV 477 + L K+LI DEPTRG+DVGAKAEIYRL+ L G AIIM+SSEL E++G+ DRV V Sbjct: 420 KMLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLAIIMVSSELAEVLGVSDRVLV 479 Query: 478 FRQGAIVTILEGDSIQSN 495 +G L GD + N Sbjct: 480 IGEGR----LRGDFVNDN 493 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.322 0.138 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,487,620 Number of extensions: 63042 Number of successful extensions: 843 Number of sequences better than 1.0e-08: 129 Number of HSP's gapped: 540 Number of HSP's successfully gapped: 194 Length of query: 510 Length of database: 1,619,870 Length adjustment: 89 Effective length of query: 421 Effective length of database: 1,198,455 Effective search space: 504549555 Effective search space used: 504549555 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)