BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0102.p
         (227 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311591|ref|YP_003775683.1| calcineurin-like phosphoesteras...   268   2e-73

>gi|300311591|ref|YP_003775683.1| calcineurin-like phosphoesterase
           [Herbaspirillum seropedicae SmR1]
          Length = 218

 Score =  268 bits (686), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 128/207 (61%), Positives = 156/207 (75%)

Query: 18  GERLRLLPQRALLWRARKMLIVADIHFGKAAAFRAGGIPVPHGTTRANLDALDSLIAAHA 77
           G +L +LP+RALLWR + MLI+AD+HFGKAAAFRAGGIPVPHGTT+ANL  +D+L+A H 
Sbjct: 11  GVQLSMLPERALLWREQAMLILADVHFGKAAAFRAGGIPVPHGTTQANLARIDALVARHG 70

Query: 78  VSHIVFLGDFLHARTARAPATLLAVQRWRESHPGMQLTLVRGNHDRHAGDPPSQLKVEVV 137
           V  IVFLGDFLHAR+ RAP TL  + +WR  H  ++LTLVRGNHD HAGDPP +L ++VV
Sbjct: 71  VQRIVFLGDFLHARSGRAPHTLATLAQWRARHAALELTLVRGNHDSHAGDPPPELDMQVV 130

Query: 138 DEPWQVGPLALCHHPQERMGTYVLAGHIHPVVRLAVGRDSLRLPCFVFGAVQATLPAFGA 197
           DEPW++GPLA CHHPQ   G + L GH+HPV RLA   D+LRLPCFV     A LPAFG 
Sbjct: 131 DEPWRLGPLAFCHHPQTVAGAFALVGHLHPVYRLAAAGDALRLPCFVVDGRWAMLPAFGE 190

Query: 198 FTGGHEVRGKQDEQLFVCTDDRVFPYP 224
           FTGG+ V     ++L++  DD V P P
Sbjct: 191 FTGGYRVTPAPGQRLYLAADDCVLPLP 217


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.140    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 781,382
Number of extensions: 32429
Number of successful extensions: 127
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 127
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 1,619,870
Length adjustment: 82
Effective length of query: 145
Effective length of database: 1,231,600
Effective search space: 178582000
Effective search space used: 178582000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 129 (54.3 bits)