BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0084.p (438 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310367|ref|YP_003774459.1| sugar ABC transporter ATPase [H... 673 0.0 gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 320 1e-88 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 310 1e-85 gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [H... 280 2e-76 gi|300310350|ref|YP_003774442.1| sugar ABC transporter ATPase [H... 266 2e-72 >gi|300310367|ref|YP_003774459.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 516 Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/434 (79%), Positives = 373/434 (85%), Gaps = 8/434 (1%) Query: 1 LGISTVYQEVNLCPNLTVAENIFIGRYPRKWGGFGPIDWAAMQRRAARLLAKLDLHIDVK 60 LGISTVYQEVNLCPNL+VAENIF+GRYP + FG IDW ++ ++ +LL +L + IDV Sbjct: 87 LGISTVYQEVNLCPNLSVAENIFVGRYPTR---FGRIDWKSVHTQSRQLLQQLQIDIDVA 143 Query: 61 KPLSAYPLAIQQMVAISRAVSVSASVLILDEPTSSLDEAEVQLLFKVLRSLRDEGMAILF 120 PLS+YPLAIQQMVAISRA+SVSA VLILDEPTSSLDEAEVQ LFKVLR LR++GMAILF Sbjct: 144 APLSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRLREQGMAILF 203 Query: 121 VTHFLDQTYEISDRITVLRNGVREGEYAASELSRFDLVNKMIGVQ-VD---ATAAGEALA 176 VTHFLDQTYEISDRITVLRNGVREGEY SELSR DLVNKM+GV VD A EALA Sbjct: 204 VTHFLDQTYEISDRITVLRNGVREGEYLVSELSRLDLVNKMVGVTAVDHRKVEAGAEALA 263 Query: 177 DNAEITPAANDGEVFLQARGLGRKGALTPQDFDLRAGEVFGLCGLLGSGRTETARLLFGA 236 T AA G VFLQA G GR+G L PQD LR GEVFGLCGLLGSGRTE ARLLFGA Sbjct: 264 SELS-TDAAAAGAVFLQAEGFGRRGVLAPQDLQLRRGEVFGLCGLLGSGRTEMARLLFGA 322 Query: 237 DKADSGEISIKGKPVKFSTPRDAIAAGIGFCSEDRKKEGAILDLSVRDNIILALQARNGL 296 D+AD G++ I+GK V+ + PRDAIAAGIGFCSEDRKKEGAIL+LSVR+NIILALQAR GL Sbjct: 323 DRADCGQLRIEGKEVRLNVPRDAIAAGIGFCSEDRKKEGAILELSVRENIILALQARQGL 382 Query: 297 LHVIPRKRQQQIAADYVKWLGIKTADIETPIGLLSGGNQQKALLARWLATDPDMLILDEP 356 V+PRKRQ QIAADYVKWLGIKTAD+ETPIGLLSGGNQQKALLARWLATDP MLILDEP Sbjct: 383 FRVLPRKRQNQIAADYVKWLGIKTADLETPIGLLSGGNQQKALLARWLATDPGMLILDEP 442 Query: 357 TRGIDVRAKQEIMDYVMALCRKGMSILFISSEIPEVLRCSDRMLVLRDRHGCGEYLRGEL 416 TRGIDVRAKQEIMD+V+A+CRKGMSILFISSEIPEVLRCSDRMLVLRDR CGEY RGEL Sbjct: 443 TRGIDVRAKQEIMDFVIAMCRKGMSILFISSEIPEVLRCSDRMLVLRDRRACGEYRRGEL 502 Query: 417 DDASVLQVIAGENA 430 D+ SVLQVIAGE A Sbjct: 503 DEQSVLQVIAGETA 516 Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 18/235 (7%) Query: 202 ALTPQDFDLRAGEVFGLCGLLGSGRTETARLLFGADKADSGEISIKGKPVKFSTPRDAIA 261 ALT L GEV L G G+G++ ++L G + D G+I + G+ + ++ +A A Sbjct: 27 ALTDVGLRLFPGEVHTLMGQNGAGKSTLIKVLTGVHEPDGGKIELDGRAIAPASTLEAQA 86 Query: 262 AGIGFCSEDRKKEGAILDLSVRDNIILA-LQARNGLL-----HVIPRKRQQQIAADYVKW 315 GI S ++ +LSV +NI + R G + H R+ QQ+ D Sbjct: 87 LGI---STVYQEVNLCPNLSVAENIFVGRYPTRFGRIDWKSVHTQSRQLLQQLQIDI--- 140 Query: 316 LGIKTADIETPIGLLSGGNQQKALLARWLATDPDMLILDEPTRGIDVRAKQEIMDYVMAL 375 D+ P+ QQ ++R L+ +LILDEPT +D Q++ + L Sbjct: 141 ------DVAAPLSSYPLAIQQMVAISRALSVSAKVLILDEPTSSLDEAEVQQLFKVLRRL 194 Query: 376 CRKGMSILFISSEIPEVLRCSDRMLVLRDRHGCGEYLRGELDDASVLQVIAGENA 430 +GM+ILF++ + + SDR+ VLR+ GEYL EL ++ + G A Sbjct: 195 REQGMAILFVTHFLDQTYEISDRITVLRNGVREGEYLVSELSRLDLVNKMVGVTA 249 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 320 bits (820), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 176/434 (40%), Positives = 264/434 (60%), Gaps = 10/434 (2%) Query: 1 LGISTVYQEVNLCPNLTVAENIFIGRYPRKWGGFGPIDWAAMQRRAARLLAKLDLHIDVK 60 LGI ++QE+NL +L+ A+NIFIGR PRK G ID + R+AA + A++ L +D Sbjct: 97 LGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLF-IDEDELNRQAAAIFARMRLDMDPS 155 Query: 61 KPLSAYPLAIQQMVAISRAVSVSASVLILDEPTSSLDEAEVQLLFKVLRSLRDEGMAILF 120 P+ +A QQMV I++A+S + VLI+DEPT++L+ AE+ LF+++R L+ +G+ I++ Sbjct: 156 TPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFRIIRDLQAQGVGIVY 215 Query: 121 VTHFLDQTYEISDRITVLRNGVREGEYAASELSRFDLVNKMIGVQVDATAAGEALADNAE 180 ++H +D+ +I+DR++V+R+G E S +++ M+G AL Sbjct: 216 ISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVG---------RALDGEQR 266 Query: 181 ITPAANDGEVFLQARGLGRKGALTPQDFDLRAGEVFGLCGLLGSGRTETARLLFGADKAD 240 I P + +V L+ RGL R A+ F LR GE+ G GL+G+GRTE AR +FGAD + Sbjct: 267 IPPDTSRNDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADPLE 326 Query: 241 SGEISIKGKPVKFSTPRDAIAAGIGFCSEDRKKEGAILDLSVRDNIILALQARNGLLHVI 300 +GEI I G +P DA+A GIG+ SEDRK G + + V+ NI L+ R + + Sbjct: 327 AGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTRVGFM 386 Query: 301 PRKRQQQIAADYVKWLGIKTADIETPIGLLSGGNQQKALLARWLATDPDMLILDEPTRGI 360 ++ ++ A YV+ L IKT +E LLSGGNQQK ++A+WL D D+L DEPTRGI Sbjct: 387 DQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGI 446 Query: 361 DVRAKQEIMDYVMALCRKGMSILFISSEIPEVLRCSDRMLVLRDRHGCGEYLRGELDDAS 420 DV AK EI + AL +G +I+ ISSE+PEVLR S R+LV+ + GE R + Sbjct: 447 DVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELARADATQEK 506 Query: 421 VLQVIAGENAEVAA 434 ++Q+ + VA+ Sbjct: 507 IMQLATQRESAVAS 520 Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 10/212 (4%) Query: 202 ALTPQDFDLRAGEVFGLCGLLGSGRTETARLLFGADKADSGEISIKGKPVKFSTPRDAIA 261 AL F+L AGEV L G G+G++ ++L G + DSG+I + GKPV+ + PR A A Sbjct: 37 ALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILLDGKPVEITEPRQAQA 96 Query: 262 AGIGFCSEDRKKEGAILDLSVRDNIILALQARNGL-LHVIPRKRQQQIAADYVKWLGIKT 320 GIG ++ + LS NI + + R + L + + +Q AA + + Sbjct: 97 LGIGIIHQELN---LMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQAAAIFARMR--LD 151 Query: 321 ADIETPIGLLSGGNQQKALLARWLATDPDMLILDEPTRGIDVRAKQEIMDYVMALCRKGM 380 D TP+G L+ QQ +A+ L+ D +LI+DEPT ++ E+ + L +G+ Sbjct: 152 MDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFRIIRDLQAQGV 211 Query: 381 SILFISSEIPEVLRCSDRMLVLRDRHGCGEYL 412 I++IS ++ E+ + +DR+ V+RD G+Y+ Sbjct: 212 GIVYISHKMDELRQIADRVSVMRD----GKYI 239 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 310 bits (794), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 173/423 (40%), Positives = 253/423 (59%), Gaps = 15/423 (3%) Query: 2 GISTVYQEVNLCPNLTVAENIFIGRYPRKWGGFGPIDWAAMQRRAARLLAKLDLHIDVKK 61 GI+ +YQE+ + PN++VA N+F+G R G ID AAM+ R +L +L Sbjct: 82 GINLIYQELAVAPNISVAANVFMGSELRTR--LGLIDHAAMRSRTDAVLRQLGAGFGASD 139 Query: 62 PLSAYPLAIQQMVAISRAVSVSASVLILDEPTSSLDEAEVQLLFKVLRSLRDEGMAILFV 121 +A QQ V I+RA+ + ++I+DEPT++L E E + LF V+R LRDEG+AI+++ Sbjct: 140 LAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVVRRLRDEGLAIIYI 199 Query: 122 THFLDQTYEISDRITVLRNGVREGEYAASELSRFDLVNKMIGVQVDATAAGEALADNAEI 181 +H + + Y ++DR+TVLR+G GE E+ +V M+G + + I Sbjct: 200 SHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMVGRSLSE------FYQHQRI 253 Query: 182 TPA-ANDGEVFLQARGLGRKGALTPQDFDLRAGEVFGLCGLLGSGRTETARLLFGADKAD 240 PA A +Q R L G + P FD+RAGEV G GL+G+GRTE ARLLFGAD Sbjct: 254 APADAAQLPTVMQVRALA-GGKIRPASFDVRAGEVLGFAGLVGAGRTELARLLFGADPRS 312 Query: 241 SGEISIKGKPVKFSTPRDAIAAGIGFCSEDRKKEGAILDLSVRDNIILALQARNGLLHVI 300 G+I ++G+PV PR A+ AGI + EDRK +G L ++V N + + +R+ L ++ Sbjct: 313 GGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNVASRHTRLGLV 372 Query: 301 PRKRQQQIAADYVKWLGIKTADIETPIGLLSGGNQQKALLARWLATDPDMLILDEPTRGI 360 + +A ++ L +K A ETP+G LSGGNQQK LLARWL P +LILDEPTRG+ Sbjct: 373 RSRSLGGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGV 432 Query: 361 DVRAKQEIMDYVMALCRKGMSILFISSEIPEVLRCSDRMLVLRDRHGCGEYLRGELDDAS 420 D+ AK EI V L +G++++ ISSE+PEV+ DR+LV+R+ + GEL A+ Sbjct: 433 DIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMRE-----GMITGELAGAA 487 Query: 421 VLQ 423 + Q Sbjct: 488 ITQ 490 Score = 102 bits (255), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 15/246 (6%) Query: 191 FLQARGL----GRKGALTPQDFDLRAGEVFGLCGLLGSGRTETARLLFGADKADSGEISI 246 LQ RG+ G AL+ +R GE+ L G G+G++ ++L G D GEI + Sbjct: 6 LLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILL 65 Query: 247 KGKPVKFSTPRDAIAAGIGFCSEDRKKEGAILDLSVRDNIILA--LQARNGLL-HVIPRK 303 G+PV P + AAGI ++ ++SV N+ + L+ R GL+ H R Sbjct: 66 DGRPVALRDPGASRAAGINLIYQEL---AVAPNISVAANVFMGSELRTRLGLIDHAAMRS 122 Query: 304 RQQQIAADYVKWLGIKTADIETPIGLLSGGNQQKALLARWLATDPDMLILDEPTRGIDVR 363 R + G +D+ G LS QQ+ +AR L ++I+DEPT + R Sbjct: 123 RTDAVLRQL--GAGFGASDLA---GRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSER 177 Query: 364 AKQEIMDYVMALCRKGMSILFISSEIPEVLRCSDRMLVLRDRHGCGEYLRGELDDASVLQ 423 +++ + V L +G++I++IS + EV +DR+ VLRD GE +R E+D ++Q Sbjct: 178 ETEQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQ 237 Query: 424 VIAGEN 429 ++ G + Sbjct: 238 MMVGRS 243 Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 4/115 (3%) Query: 71 QQMVAISRAVSVSASVLILDEPTSSLDEAEVQLLFKVLRSLRDEGMAILFVTHFLDQTYE 130 QQ V ++R + ++ VLILDEPT +D +++++ L +G+A++ ++ L + Sbjct: 407 QQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIG 466 Query: 131 ISDRITVLRNGVREGEYAASELSRFDLVNKMIGVQVDATAAGEALADNAEITPAA 185 I DR+ V+R G+ GE A + +++ +++ V TA A ++ TP A Sbjct: 467 ICDRVLVMREGMITGELAGAAITQENIMRLATDTNVPRTAP----ASHSSPTPLA 517 >gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 506 Score = 280 bits (715), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 160/406 (39%), Positives = 241/406 (59%), Gaps = 15/406 (3%) Query: 2 GISTVYQEVNLCPNLTVAENIFIGRYPR-KWGGFGPIDWAAMQRRAARLLAKLDLHIDVK 60 G+ V+QE +L P L +N+F+ R R +WG + AAM+RRA ++ +L + I + Sbjct: 81 GVGVVFQEFSLIPYLDAVDNMFLARELRSRWGW---LQRAAMRRRAQEIIGQLGVAIPLD 137 Query: 61 KPLSAYPLAIQQMVAISRAVSVSASVLILDEPTSSLDEAEVQLLFKVLRSLRDEGMAILF 120 P+ +A QQ V I++A+++ A +L+LDEPT++L AEV+ LF V+RSLR +G+AI+F Sbjct: 138 VPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRSLRAQGVAIIF 197 Query: 121 VTHFLDQTYEISDRITVLRNGVREGEYAASELSRFDLVNKMIGVQVDATAAGEALADNAE 180 ++H L++ +EI DRITVLR+G A +E+ + LV M+G +++ + A E Sbjct: 198 ISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVGRRIENCFPPKP-AKGGE 256 Query: 181 ITPAANDGEVFLQARGLGRKGALTPQDFDLRAGEVFGLCGLLGSGRTETARLLFGADKAD 240 +GEV L+ L + F LR GE+ G GL+GSGRTET + GA A Sbjct: 257 -----GEGEVVLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTETVLAMLGAHAAL 311 Query: 241 SGEISIKGKPVKFSTPRDAIAAGIGFCSEDRKKEGAILDLSVRDNIILALQAR---NGLL 297 S ++S+ G P++F+ P A+ AGIG E RK++G I S+ N+ L + GL Sbjct: 312 SCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLNNYGKYRLGGLF 371 Query: 298 HVIPRKRQQQIAADYVKWLGIKTADIETPIGLLSGGNQQKALLARWLATDPDMLILDEPT 357 + R+R+QQ ++ + +K + + LSGGNQQK ++ARW+ +LI DEPT Sbjct: 372 --LDRRREQQATEAAMQRVRVKAPGAQVRVDTLSGGNQQKVVIARWINHAMKVLIFDEPT 429 Query: 358 RGIDVRAKQEIMDYVMALCRKGMSILFISSEIPEVLRCSDRMLVLR 403 RGIDV AK EI + +G SIL ISSE+PEV+ +DR+ V R Sbjct: 430 RGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFR 475 Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 9/227 (3%) Query: 207 DFDLRAGEVFGLCGLLGSGRTETARLLFGADKADSGEISIKGKPVKFSTPRDAIAAGIGF 266 D ++RAGEV L G G+G++ ++L G + D+GEI I G+P +F + R AIA G+G Sbjct: 25 DLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRIDGQPCRFDSYRAAIAGGVGV 84 Query: 267 CSEDRKKEGAILDLSVRDNIILA--LQARNGLLHVIPRKRQQQIAADYVKWLGIKTADIE 324 ++ I L DN+ LA L++R G L +R+ Q + + LG+ ++ Sbjct: 85 VFQEFS---LIPYLDAVDNMFLARELRSRWGWLQRAAMRRRAQ---EIIGQLGVAI-PLD 137 Query: 325 TPIGLLSGGNQQKALLARWLATDPDMLILDEPTRGIDVRAKQEIMDYVMALCRKGMSILF 384 P+ LS QQ +A+ LA D +L+LDEPT + + + + +L +G++I+F Sbjct: 138 VPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRSLRAQGVAIIF 197 Query: 385 ISSEIPEVLRCSDRMLVLRDRHGCGEYLRGELDDASVLQVIAGENAE 431 IS + E+ DR+ VLRD E+D A +++++ G E Sbjct: 198 ISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVGRRIE 244 >gi|300310350|ref|YP_003774442.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 266 bits (681), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 154/415 (37%), Positives = 242/415 (58%), Gaps = 28/415 (6%) Query: 1 LGISTVYQEVNLCPNLTVAENIFI--------GRYPRKWGGFGPIDWAAMQRRAARLLAK 52 LGI TVYQ+++L PN++VAEN+ + GR R + D A+ + AAR L Sbjct: 92 LGIETVYQDLSLLPNMSVAENVALSEQLVHHQGRLARLF------DRHALNQTAARALRA 145 Query: 53 LDLHID---VKKPLSAYPLAIQQMVAISRAVSVSASVLILDEPTSSLDEAEVQLLFKVLR 109 ++L D + + P+A +Q++AI+RA++ SA ++I+DEPT+SL + EV L KV+ Sbjct: 146 VNLPADADFLDTRVDELPIATRQLIAIARAIATSARMVIMDEPTTSLTQKEVDALVKVIN 205 Query: 110 SLRDEGMAILFVTHFLDQTYEISDRITVLRNGVREGEYAASELSRFDLVNKMIGVQVDAT 169 LR G+A+LFV+H LD+ + I + V R+G + + + ++ L M G Q+ Sbjct: 206 GLRANGVAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQQFTKAQLGQLMTGKQL--- 262 Query: 170 AAGEALADNAEITPAANDGEVFLQARGLGRKGALTPQDFDLRAGEVFGLCGLLGSGRTET 229 + E +A++ + ++ R LGR GA F LR GE+ G+ GLL SGR E Sbjct: 263 -SQERYRVDAQLH------KPLMEVRALGRHGAFEDVSFALRQGEILGITGLLDSGRNEL 315 Query: 230 ARLLFGADKADSGEISIKGKPVKFSTPRDAIAAGIGFCSEDRKKEGAILDLSVRDNIILA 289 A L G + A +G+I+++G+P+ P DAI GIG+ EDR EG LD S+RDNI+ Sbjct: 316 ALALAGVEPARAGQITLEGQPLSLRNPGDAITHGIGYVPEDRISEGLFLDKSIRDNIVTT 375 Query: 290 -LQARNGLLHVIPRKRQQQIAADYVKWLGIKTADIETPIGLLSGGNQQKALLARWLATDP 348 L+ G + Q+ + D V+ L I T D++ P+ LSGGNQQ+ L+ RWLA +P Sbjct: 376 ILRKLRGKFGALDAAACQRFSTDTVRQLQIATPDVDRPVQSLSGGNQQRVLIGRWLAINP 435 Query: 349 DMLILDEPTRGIDVRAKQEIMDYVMALCRKGMSILFISSEIPEVLRCSDRMLVLR 403 +LIL PT G+DV +K I + L ++G+ ++ IS ++PE+L+ D +L+++ Sbjct: 436 RVLILHGPTVGVDVGSKDIIYRIIQDLAQRGLGVILISDDLPELLQNCDNLLLMK 490 Score = 76.3 bits (186), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 124/255 (48%), Gaps = 12/255 (4%) Query: 184 AANDGEVFLQARGLGRK----GALTPQDFDLRAGEVFGLCGLLGSGRTETARLLFGADKA 239 +A + FL+ +G+ ++ AL D + AGE++ L G G G++ +++ GA Sbjct: 10 SAAPAQEFLRLQGIHKRFAGVHALRGVDLTIHAGEIYHLLGENGCGKSTLIKIIAGAQPP 69 Query: 240 DSGEISIKGKPVKFSTPRDAIAAGIGFCSEDRKKEGAILDLSVRDNIILALQ---ARNGL 296 GEI I+G+ V TP +++ GI +D + ++SV +N+ L+ Q + L Sbjct: 70 SEGEIYIQGQRVAELTPLASLSLGIETVYQDLS---LLPNMSVAENVALSEQLVHHQGRL 126 Query: 297 LHVIPRKRQQQIAADYVKWLGIKT-AD-IETPIGLLSGGNQQKALLARWLATDPDMLILD 354 + R Q AA ++ + + AD ++T + L +Q +AR +AT M+I+D Sbjct: 127 ARLFDRHALNQTAARALRAVNLPADADFLDTRVDELPIATRQLIAIARAIATSARMVIMD 186 Query: 355 EPTRGIDVRAKQEIMDYVMALCRKGMSILFISSEIPEVLRCSDRMLVLRDRHGCGEYLRG 414 EPT + + ++ + L G+++LF+S ++ E + +V RD + Sbjct: 187 EPTTSLTQKEVDALVKVINGLRANGVAVLFVSHKLDECFAIGGQAIVFRDGEKVAQGPIQ 246 Query: 415 ELDDASVLQVIAGEN 429 + A + Q++ G+ Sbjct: 247 QFTKAQLGQLMTGKQ 261 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.320 0.137 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,263,333 Number of extensions: 52270 Number of successful extensions: 709 Number of sequences better than 1.0e-08: 107 Number of HSP's gapped: 559 Number of HSP's successfully gapped: 162 Length of query: 438 Length of database: 1,619,870 Length adjustment: 88 Effective length of query: 350 Effective length of database: 1,203,190 Effective search space: 421116500 Effective search space used: 421116500 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)