BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0686.p
         (297 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransfera...   454   e-129
gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl ac...    64   1e-11

>gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 282

 Score =  454 bits (1169), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/278 (78%), Positives = 242/278 (87%)

Query: 17  MLFSLFRLLSFFPLPLLHLIGIVMGWLVYLASPSYRKRLKDNLTRAGHGRHLLAAVNEAG 76
           ML SLFRLLSF PLP LH IG+V+GWLV+L SPSYR+RL+ N+T AGHG  L  AV EAG
Sbjct: 1   MLVSLFRLLSFLPLPALHAIGVVVGWLVFLLSPSYRRRLRSNITLAGHGASLYRAVGEAG 60

Query: 77  KGIFELPFIWCAAPQRVLRTARIENWELAQQALEAKTGVVFLTPHLGCFEIIAQAIAEKT 136
           KG+FELPFIWCA+P+RVLRTARI NWEL QQAL  K+GV+FLTPHLGCFEI AQ +A  T
Sbjct: 61  KGMFELPFIWCASPRRVLRTARIVNWELVQQALATKSGVIFLTPHLGCFEIAAQVVARHT 120

Query: 137 SLTALYRPPRKAALKPLIEGARSRPNLHLAPANLSGVRVLLKALKKGLAIGLLPDQVPQH 196
           SL+ LYRPPRKAALKPLIEGAR+R NLHLAPANL+GVR+LLKALK G AIGLLPDQVPQ+
Sbjct: 121 SLSVLYRPPRKAALKPLIEGARARANLHLAPANLAGVRILLKALKTGQAIGLLPDQVPQN 180

Query: 197 GEGVWADFFGKPAYTMTLSAKMHQMSGAPIILSYAERLSWGRGFVIRFVAFEETLGETPE 256
           GEGVWA FFGKPAYTMTLSAK+ QMSGAP++L+YA+RLSWGRG+ I FV FE  L  TPE
Sbjct: 181 GEGVWAGFFGKPAYTMTLSAKLQQMSGAPLLLTYAQRLSWGRGYAIHFVPFEGALDGTPE 240

Query: 257 QQARAINLAMEKLIARCPAQYIWSYNRYKTPPGVTAPG 294
           QQA+AIN AME LIARCPAQYIWSYNRYKTPPGV+ PG
Sbjct: 241 QQAQAINAAMEALIARCPAQYIWSYNRYKTPPGVSRPG 278


>gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl
           acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 294

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 25/291 (8%)

Query: 16  NMLFSLFRLLSFFPLPLLHLIGIVMGWLVYLASPSYRKRLKDNLTRAGHGRHLLAAVNEA 75
            +L ++  LL + PLP+L  +G  +G L+YL     R     NL      +     V+ A
Sbjct: 2   RLLLAIMWLLHWLPLPILGRLGEGIGSLLYLYMRPRRHIALTNLRLCFPEKTEEERVSIA 61

Query: 76  -------GKGIFELPFIWCAAPQRVLRTARIENWELAQQALE--AKTGVVFLTPHLGCFE 126
                   +   E   +W A   R+ R  ++E        L+  AK   + L PH  C E
Sbjct: 62  REHFRLFARSALERGILWWAPISRLRRLIQVE----PGMPLDTFAKGPTILLAPHFVCLE 117

Query: 127 IIAQAIA--EKTSLTALYRPPRKAALKPLIEGARSRPNLHLAPANL----SGVRVLLKAL 180
           I    +    + S   +Y   R      +I+ A  +  L   PA L     GV+ +++A+
Sbjct: 118 IPGATLGVFSEYSACTIYTKQRND----VIDRALLKGRLRFRPATLLAREQGVKPIIRAM 173

Query: 181 KKGLAIGLLPDQVPQHGEGVWADFFGKPAYTMTLSAKMHQMSGAPIILSYAERLSWGRGF 240
           +KGL   +LPD      +  +  FFG PA T+T +A++   +GA ++      L   +G+
Sbjct: 174 RKGLPFLMLPDMDFGIRDAEFVPFFGVPAATLTATARIAAATGAAVVPVVCTFLPDYKGW 233

Query: 241 -VIRFVAFEETLGETPEQQARAINLAMEKLIARCPAQYIWSYNRYKT-PPG 289
               + A+ +  GE      R +N  +E  +   PA+Y W++ R+KT PPG
Sbjct: 234 KATYYPAWTDYPGEDIVAATRRMNAFIEDRVREHPAEYFWAHKRFKTRPPG 284


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.138    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 898,993
Number of extensions: 34967
Number of successful extensions: 139
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 137
Number of HSP's successfully gapped: 2
Length of query: 297
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 212
Effective length of database: 1,217,395
Effective search space: 258087740
Effective search space used: 258087740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)