BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0610.p (636 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310722|ref|YP_003774814.1| ABC transporter ATPase [Herbasp... 1035 0.0 gi|300313989|ref|YP_003778081.1| ABC transporter ATPase [Herbasp... 353 3e-98 gi|300311473|ref|YP_003775565.1| ABC transporter ATPase [Herbasp... 248 9e-67 gi|300311530|ref|YP_003775622.1| ABC transporter ATPase [Herbasp... 244 2e-65 gi|300312477|ref|YP_003776569.1| oligopeptide ABC transporter AT... 73 6e-14 >gi|300310722|ref|YP_003774814.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 640 Score = 1035 bits (2675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 532/641 (82%), Positives = 577/641 (90%), Gaps = 10/641 (1%) Query: 1 MAVISLSNAQLAFGHVPLLDHAEFSLETGERVGLIGRNGTGKSSLLKIIAAVSKLDDGLL 60 MAVISLS+AQLAFGHV LLDHAEFSLETGER+GLIGRNGTGKSSLLKIIA SKLDDGLL Sbjct: 1 MAVISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLL 60 Query: 61 VMQQGLKIAYVDQEPHFPAEMTIFNAVASGLGELPALLAEYESLTGQFGGDNDEALMERM 120 VMQQ LKIAYVDQEPHFP EMT+F+AVASGLGELPALLAEYE++TGQFGGDND+AL+ERM Sbjct: 61 VMQQNLKIAYVDQEPHFPEEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERM 120 Query: 121 HDIQLILDAADAWSLNNKVETTLDKLNLKGEALIGELSGGMQKRVALACGLVGAPDVLLL 180 H IQ +LDAADAWS+ NKVETTLDKLNL +A IGELSGGM+KRVALACGLVG PDVLLL Sbjct: 121 HQIQTVLDAADAWSIGNKVETTLDKLNLNRDARIGELSGGMKKRVALACGLVGNPDVLLL 180 Query: 181 DEPTNHLDFGSILWLEGLLRDYKGSVLFVTHDRSFLDNVATRIIELDRGKLLSFPGNFST 240 DEPTNHLDFGSILWLEGLLRD+KGS+LF+THDRSFLDNV+TRIIELDRGK+LSFPGNF+T Sbjct: 181 DEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTT 240 Query: 241 YQARKEELLDNEEVENAKFDKFLAQEEVWIRKGVKARRTRDEGRVRRLESLRLERSARRD 300 YQ RK ELL NEEVENAKFDKFLAQEEVWIRKGV+ARRTRDEGRVRRLE+LR++RS RR+ Sbjct: 241 YQTRKAELLANEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRE 300 Query: 301 RQGQVKLEVSSGERSGKIVAELENVSKSYGGKTIVRDFSGILMRGDKIGLIGQNGAGKTT 360 RQGQVKLEV +GERSGKIVAELENV+K+YG KTIVRDFS ILMRGDK+GLIGQNGAGKTT Sbjct: 301 RQGQVKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKTT 360 Query: 361 LLKLILGEETADAGTVRQGTKLQVAYFDQMRTQLNEEATLADTIAPGSDWVEVNGQRRHV 420 LLKLILGEE D+GTV+QGTK+QVAYFDQMR QLNEE TLADTIAPGSDWVEVNGQR+HV Sbjct: 361 LLKLILGEEAPDSGTVKQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHV 420 Query: 421 MTYLGDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE 480 MTYL DFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE Sbjct: 421 MTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE 480 Query: 481 ELLEDYEGTVFLVSHDRTFLDNVVTQVIASEGDGVWKEYVGGYSDWERVRASSQASAK-- 538 ELLE+YEGTVFLVSHDR FLDNVVTQVIASEG+GVW+EYVGGYSDWER R + QA++ Sbjct: 481 ELLEEYEGTVFLVSHDRMFLDNVVTQVIASEGNGVWREYVGGYSDWERQRPAQQAASSKA 540 Query: 539 ------KSDGKSESKPAELPVAAPAVAKPKKLSYKEQRELEDLPKLIAQLEEEQAAISAK 592 KS+ K+ES A VA KKLSYKEQREL++LPK IA LE EQ +SAK Sbjct: 541 AAKAADKSEVKAESTMAA--PVVAPVAAKKKLSYKEQRELDELPKRIAALEAEQKELSAK 598 Query: 593 LADPDLYKAGGDEAGRLNARFAEIDGLLLENLERWEVIEAR 633 LADPDLYK G DEA +LN RFAEID LL +LERWE IE + Sbjct: 599 LADPDLYKKGADEAVKLNQRFAEIDEELLVSLERWEEIEGK 639 >gi|300313989|ref|YP_003778081.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 555 Score = 353 bits (905), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 208/537 (38%), Positives = 311/537 (57%), Gaps = 12/537 (2%) Query: 18 LLDHAEFSLETGERVGLIGRNGTGKSSLLKIIAAVSKLDDGLLVMQQGLKIAYVDQEPHF 77 +L S G ++G++G NG+GKS+LLKI+A + K +G + L I Y+ QEP Sbjct: 21 ILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDKEIEGEAIPMPNLNIGYLPQEPQL 80 Query: 78 PAEMTIFNAVASGLGELPALLAEYESLTGQFGGDNDE--ALMERMHDIQLILDAADAWSL 135 AE T+ V S LGE+ A+ +++ + ++ + AL ++ I+ AAD SL Sbjct: 81 DAEKTVRQEVESALGEVFEAQAKLDAVYAAYAEEDADFDALATEQARLEAIIAAADGNSL 140 Query: 136 NNKVETTLDKLNLKG-EALIGELSGGMQKRVALACGLVGAPDVLLLDEPTNHLDFGSILW 194 N ++E D L L +A IG LSGG ++RVAL L+ PD+LLLDEPTNHLD S+ W Sbjct: 141 NQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVDW 200 Query: 195 LEGLLRDYKGSVLFVTHDRSFLDNVATRIIELDRGKLLSFPGNFSTYQARKEELLDNEEV 254 LE L+ + G+V+ +THDR FLDN A I+ELDRG + + GN+S++ +KE L EE Sbjct: 201 LEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEARLKQEEA 260 Query: 255 ENAKFDKFLAQEEVWIRKGVKARRTRDEGRVRRLESLRLERSARRDRQGQVKLEVSSGER 314 + K +A+E W+R+ K R+ + + R+ R L +R+ ++ + V+ ER Sbjct: 261 SESARQKTIAKELEWVRQNPKGRQAKSKARLARFNELSEYEYQKRNETQEIFIPVA--ER 318 Query: 315 SGKIVAELENVSKSYGGKTIVRDFSGILMRGDKIGLIGQNGAGKTTLLKLILGEETADAG 374 G V E +NVSK YG + ++ D + + G +G+IG NGAGK+TL +++ G ET D+G Sbjct: 319 LGNEVIEFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGAGKSTLFRMLAGRETPDSG 378 Query: 375 TVRQGTKLQVAYFDQMRTQLNEEATLADTIAPGSDWVEVNGQRRHVMTYLGDFLFAPERA 434 V G ++V+ DQ R L + T+ + ++ G+D + V YLG F F Sbjct: 379 EVVLGPTVKVSLVDQSREDLGNKKTVFEDVSGGADILTVGRFEMPSRAYLGRFNFKGGDQ 438 Query: 435 RSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLEELLEDYEGTVFLVS 494 + V LSGGER RL LA+ + NVL+LDEP+NDLD++TL LE+ L ++ GTV ++S Sbjct: 439 QKIVGNLSGGERGRLHLAKTLLQGGNVLLLDEPSNDLDVETLRALEDALLEFAGTVLVIS 498 Query: 495 HDRTFLDNVVTQVIASEGDGVWKEYVGGYSDWERVRASSQASAKKSDGKSESKPAEL 551 HDR FLD + T +IA EGD + G Y ++E A KK G+ +KP + Sbjct: 499 HDRWFLDRIATHIIAFEGDSQVTFFDGNYQEYE-------ADKKKRLGEEAAKPKRI 548 >gi|300311473|ref|YP_003775565.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 660 Score = 248 bits (633), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 200/643 (31%), Positives = 310/643 (48%), Gaps = 58/643 (9%) Query: 3 VISLSNAQLAFGHVPLLDHAEFSLETGERVGLIGRNGTGKSSLLKIIAAVSKLDDGLLVM 62 +I L G PLL++ + +L G+++GLIG NG GKSSL ++ D G + Sbjct: 1 MIRFQQVSLQRGVKPLLENVDLTLNPGDKIGLIGANGAGKSSLFAMLRGELHADQGNIDF 60 Query: 63 QQGLKIAYVDQEPHFPAEMTIFNAVASGLGELPALLAEYESLTGQFGGDNDEALMERMHD 122 ++AYV QE I A+ G L L AE Q +D + +H Sbjct: 61 PARWRMAYVAQETPALDRPAIEYAI-DGDAHLRQLEAELARAEAQPDDKHDGNHIAELHT 119 Query: 123 IQLILDAADAWSLNNKVETTLDKLNLKGEAL---IGELSGGMQKRVALACGLVGAPDVLL 179 L ADA+++ ++ E L L E + + SGG + R+ LA L+ D+LL Sbjct: 120 A---LADADAYTVRSRAEQLLLGLGFSLEQMERPVASFSGGWRMRLNLAQALMCPSDLLL 176 Query: 180 LDEPTNHLDFGSILWLEGLLRDYKGSVLFVTHDRSFLDNVATRIIELDRGKLLSFPGNFS 239 LDEPTNHLD +I+WLE L+ Y+G++L ++HDR FLD V I+ +D KL + GN+S Sbjct: 177 LDEPTNHLDLDAIIWLEDWLKRYEGTLLIISHDRDFLDGVVNVIVHIDDRKLKRYSGNYS 236 Query: 240 TYQARKEE-------LLDNEEVENAKFDKFLAQEEVWIRKGVKARRTRDEGR-VRRLESL 291 ++ ++ +++ ++ + A F+ + + K KAR+ + + + ++E L Sbjct: 237 AFERQRSAQLELMAGMIEKQQRQRAHLQSFI---DRFKAKATKARQAQSRMKALSKMEEL 293 Query: 292 RLERSARRDRQGQVKLEVSSGERSGKIVAELENVSKSYG----------GKTIVRDFSGI 341 R+A + E + + +E V+ Y K IV Sbjct: 294 APLRAA-----AEFSFEFREPLSAPNPLLVMEKVNAGYHIEGKNGAPDEDKIIVHGIDFS 348 Query: 342 LMRGDKIGLIGQNGAGKTTLLKLILGEETADAGTVRQGTKLQVAYFDQMRTQL--NEEAT 399 L G +IGL+G NGAGK+TL+K + GE +GT R G L + YF Q + ++ ++E+ Sbjct: 349 LQNGQRIGLLGVNGAGKSTLIKTVAGEIDPLSGTARLGKGLVIGYFAQHQVEMLRHDESP 408 Query: 400 LADTIAPGSDWVEVNGQRRHVMTYLGDFLFAPERARSPVRTLSGGERNRLLLARLFAKPA 459 L D E + + +LG F F A S + SGGE+ RL LA + + Sbjct: 409 LWHLTRLAPDVRE-----QELRNFLGSFNFNGTMATSSIAPFSGGEKARLALALIVWQRP 463 Query: 460 NVLVLDEPTNDLDIDTLELLEELLEDYEGTVFLVSHDRTFLDNVVTQVIASEGDGVWKEY 519 N+L+LDEPTN LD++T E L L +EGT+ LVSHDR L Q + +G + + Sbjct: 464 NLLLLDEPTNHLDLETREALTMALAQFEGTLVLVSHDRHLLRATTDQFLIV-AEGKLQPF 522 Query: 520 VG---GYSDW--ERVRASSQASAKKSDGKSESKPAELPVAAPAVAKPKKLSYKEQRE--- 571 G Y DW + A+ +A + + S+P E AA K +K EQR+ Sbjct: 523 DGDLDDYKDWLFKTKLAARNDAAAAAPLPTASQPVESAPAALVDRKEQKRLEAEQRQKMS 582 Query: 572 ---------LEDLPKLIAQLEEEQAAISAKLADPDLYKAGGDE 605 ++ L + IA+L +A I A+LA PD+Y A E Sbjct: 583 ALKKPIEARIKRLDEQIAKLNVRKAEIDARLASPDIYDAANKE 625 >gi|300311530|ref|YP_003775622.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 532 Score = 244 bits (622), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 164/540 (30%), Positives = 285/540 (52%), Gaps = 31/540 (5%) Query: 3 VISLSNAQLAFGHVPLLDHAEFSLETGERVGLIGRNGTGKSSLLKIIAAVSKLDDGLLVM 62 ++S +N + FG PL ++ G R GLIG NG GKS+ +KI+ + G + + Sbjct: 1 MLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSL 60 Query: 63 QQGLKIAYVDQEPHFPAEMTIFNAVASGLGELPALLAEYESLTGQFGGDNDEALMERMHD 122 ++ + Q+ EM + + V G E+ A ++E +++ +D+ + + D Sbjct: 61 DVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYM--KAAD 118 Query: 123 IQLILDAADAWSLNNKVETTLDKLNLKGEALIGELSG---GMQKRVALACGLVGAPDVLL 179 ++ D ++ + L + + E G +S G + RV LA L PD+LL Sbjct: 119 LEAKFAEYDGYTAEARAGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNPDILL 178 Query: 180 LDEPTNHLDFGSILWLEGLLRDYKGSVLFVTHDRSFLDNVATRIIELDRGKLLSFPGNFS 239 LDEPTN+LD +I WLE +L + +++ ++HDR FL+ V T + ++D G L +PGN+ Sbjct: 179 LDEPTNNLDINTIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYD 238 Query: 240 TY-----QARKEELLDNEEVENAKFDKFLAQEEVWIRK--GVKARRTRDEGRVRRLESLR 292 Y QAR ++L NAK + +A+ + ++R+ K++ + R ++++ ++ Sbjct: 239 DYMLASSQARAQQL-----AANAKAKEKVAELQDFVRRFSANKSKARQATSRAKQIDKIK 293 Query: 293 LERSARRDRQGQ-VKLEVSSGERS-GKIVAELENVSKSYGGKTIVRDFSGILMRGDKIGL 350 +E R ++ E GE+ ++ E + ++K+Y + I ++FS ++ G+KI + Sbjct: 294 VEDIKPSSRVNPFIRFE---GEKKLHRLAVETQGITKTY-DRDIFKNFSIMVEAGEKIAI 349 Query: 351 IGQNGAGKTTLLKLILGEETA---DAGTVRQGTKLQVAYFDQMRT-QLNEEATLADTIAP 406 IG NGAGKTTLL+ I G+ T D G V+ V Y Q T + TL D + Sbjct: 350 IGANGAGKTTLLRSIGGDVTGLHPDGGLVKWAENANVGYMPQDPTEEFAGGETLTDWMGK 409 Query: 407 GSDWVEVNGQRRHVMTYLGDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDE 466 W + + V LG LF+ + + V+ LSGGE+ R++ +L NVL++DE Sbjct: 410 ---WTQEGDDDQAVRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDE 466 Query: 467 PTNDLDIDTLELLEELLEDYEGTVFLVSHDRTFLDNVVTQVIASEGDGVWKEYVGGYSDW 526 PTN +D++++E L LE Y GT+ VSHDR F+ ++ T+++ + DG ++ GGY D+ Sbjct: 467 PTNHMDMESIESLNIALEKYAGTLIFVSHDREFVSSLATRILEVK-DGQVIDFQGGYEDY 525 Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 134/264 (50%), Gaps = 40/264 (15%) Query: 324 NVSKSYGGKTIVRDFSGILMRGDKIGLIGQNGAGKTTLLKLILGEETADAGTV------R 377 N++ +G K + + S G++ GLIG NG GK+T +K++ G+ AG V R Sbjct: 6 NITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDVNER 65 Query: 378 QGTKLQVAY-FDQMRT--------------QLNEEATLADTIAPGSDWVEVNGQRRHVMT 422 G Q + +++MR +A A+ A D+++ Sbjct: 66 LGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLEAKFAE 125 Query: 423 Y--------LGDFLFAP----ERARSPVRTLSGGERNRLLLAR-LFAKPANVLVLDEPTN 469 Y G+ L E+ P+ ++ G + R+LLA+ LF+ P ++L+LDEPTN Sbjct: 126 YDGYTAEARAGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNP-DILLLDEPTN 184 Query: 470 DLDIDTLELLEELLEDYEGTVFLVSHDRTFLDNVVTQVIASEGDGVWKEYVGGYSDWERV 529 +LDI+T+ LEE+L + T+ ++SHDR FL+ V T +A G K Y G Y D+ + Sbjct: 185 NLDINTIRWLEEVLNERNSTMIIISHDRHFLNQVCTH-MADMDYGTLKIYPGNYDDY--M 241 Query: 530 RASSQASAKK--SDGKSESKPAEL 551 ASSQA A++ ++ K++ K AEL Sbjct: 242 LASSQARAQQLAANAKAKEKVAEL 265 Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 113/231 (48%), Gaps = 53/231 (22%) Query: 26 LETGERVGLIGRNGTGKSSLLKIIAA-VSKL--DDGLLVMQQGLKIAYVDQEPHFPAEMT 82 +E GE++ +IG NG GK++LL+ I V+ L D GL+ + + Y+ Q+P Sbjct: 341 VEAGEKIAIIGANGAGKTTLLRSIGGDVTGLHPDGGLVKWAENANVGYMPQDPT------ 394 Query: 83 IFNAVASGLGELPALLAEYESLTGQFG-----GDNDEALMERMHDIQLILDAADAWSLNN 137 A G E+LT G GD+D+A Sbjct: 395 --EEFAGG-----------ETLTDWMGKWTQEGDDDQA---------------------- 419 Query: 138 KVETTLDKLNLKGEAL---IGELSGGMQKRVALACGLVGAPDVLLLDEPTNHLDFGSILW 194 V L +L G+ + + LSGG + R+ ++G +VLL+DEPTNH+D SI Sbjct: 420 -VRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDMESIES 478 Query: 195 LEGLLRDYKGSVLFVTHDRSFLDNVATRIIELDRGKLLSFPGNFSTYQARK 245 L L Y G+++FV+HDR F+ ++ATRI+E+ G+++ F G + Y A + Sbjct: 479 LNIALEKYAGTLIFVSHDREFVSSLATRILEVKDGQVIDFQGGYEDYLASQ 529 >gi|300312477|ref|YP_003776569.1| oligopeptide ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 280 Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 29/197 (14%) Query: 335 VRDFSGILMRGDKIGLIGQNGAGKTTLLKLILGEETADAGTV-----------RQGTKLQ 383 V D S L RG+ +GL+G++G GK+TL K++LG +G V R+ Sbjct: 41 VNDVSLRLYRGETLGLVGESGCGKSTLAKMLLGLLPPTSGNVLINGQEVDPTERKAHARH 100 Query: 384 V-AYFDQMRTQLNEEATLADTIAPG------SDWVEVNGQRRHVMTYLGDFLFAPER--A 434 + F + LN T+A+ + + E N Q + ++ D + PER A Sbjct: 101 IQPIFQDPYSSLNPRKTVAEIVGLPLKLHGIGNAAERNRQVKDIL----DLVGMPERTHA 156 Query: 435 RSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDT----LELLEELLEDYEGTV 490 + P LSGG+R R+ +AR ++L+ DEPT+ LD+ L LL +L ++ T Sbjct: 157 QYP-NQLSGGQRQRVAIARALILRPDILICDEPTSALDVSVQAQILNLLLDLKAEFGLTY 215 Query: 491 FLVSHDRTFLDNVVTQV 507 +SHD ++++V +V Sbjct: 216 LFISHDLGVVEHLVDRV 232 Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 27/228 (11%) Query: 14 GHVPLLDHAEFSLETGERVGLIGRNGTGKSSLLKIIAAVSKLDDGLLVMQQGLKIAYVDQ 73 G + ++ L GE +GL+G +G GKS+L K++ + G V+ G ++ ++ Sbjct: 36 GQLKAVNDVSLRLYRGETLGLVGESGCGKSTLAKMLLGLLPPTSGN-VLINGQEVDPTER 94 Query: 74 EPHFPAEMTIFNAVASGLGELPALLAEYESLTGQFGGDNDEALMERMHDIQLILDAADAW 133 + H IF Y SL + L ++H I +A Sbjct: 95 KAHARHIQPIFQD-------------PYSSLNPRKTVAEIVGLPLKLHGI------GNAA 135 Query: 134 SLNNKVETTLDKLNLKGEA---LIGELSGGMQKRVALACGLVGAPDVLLLDEPTNHLDFG 190 N +V+ LD + + +LSGG ++RVA+A L+ PD+L+ DEPT+ LD Sbjct: 136 ERNRQVKDILDLVGMPERTHAQYPNQLSGGQRQRVAIARALILRPDILICDEPTSALDVS 195 Query: 191 SILWLEGLLRDYKG----SVLFVTHDRSFLDNVATRIIELDRGKLLSF 234 + LL D K + LF++HD ++++ R+ +++G ++ Sbjct: 196 VQAQILNLLLDLKAEFGLTYLFISHDLGVVEHLVDRVAVMNQGSIVEL 243 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.315 0.135 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,853,641 Number of extensions: 76347 Number of successful extensions: 888 Number of sequences better than 1.0e-08: 64 Number of HSP's gapped: 822 Number of HSP's successfully gapped: 83 Length of query: 636 Length of database: 1,619,870 Length adjustment: 91 Effective length of query: 545 Effective length of database: 1,188,985 Effective search space: 647996825 Effective search space used: 647996825 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 134 (56.2 bits)