BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0587.p (793 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300309869|ref|YP_003773961.1| TonB-dependent ferric sideropho... 922 0.0 gi|300309379|ref|YP_003773471.1| TonB-dependent ferric sideropho... 637 0.0 gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore rece... 395 e-111 gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore rece... 190 4e-49 gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore rece... 124 4e-29 >gi|300309869|ref|YP_003773961.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 725 Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/681 (67%), Positives = 550/681 (80%), Gaps = 5/681 (0%) Query: 115 GSNNNAVLPTVTITESADPTAP--YAGGLVARGGSLGVLGTASVMDTPFSTTNYTSQGIE 172 G+ +A LPTVT+T +D P YAGG VARGG LGVLGT V+DTPFST NYT +GI+ Sbjct: 48 GTAQDASLPTVTVTGRSDTGLPAAYAGGQVARGGGLGVLGTQDVLDTPFSTLNYTVEGIK 107 Query: 173 DVQARAIGDVIANDSSVRNTNGNGGFGDSYQIRGFTMSANDVAFNGLYGMVPLTRMPIAM 232 ++QAR +GDVI +++SVRNTNG+GGFGDSYQIRG +S ND FNGLYG+V L+RM AM Sbjct: 108 NLQARTVGDVITSEASVRNTNGDGGFGDSYQIRGLPVSVNDTGFNGLYGLVSLSRMSTAM 167 Query: 233 VERIEVLKGPGTLMYGMGPAGGVGGAVNLVSKRAHEDPISSVTATYLSNSQFGLKGDIGR 292 +ER+EVLKGPGTLMYGMGPAGGVGGA+NLVSKRA E+P+SS+TATY+ ++Q GL+GDIGR Sbjct: 168 LERVEVLKGPGTLMYGMGPAGGVGGAINLVSKRAGEEPVSSLTATYVGSAQLGLQGDIGR 227 Query: 293 RFGDNQEWGIRVNALYADGNTGLSGSNQQQSMGSVGLDYSGRRVRWSLDAYTQHEDTRNF 352 RFG ++EWGIRVNALYADG T ++ + QQQSMGS+ LDY+GR++RW+LDAYTQHEDTRNF Sbjct: 228 RFGQDKEWGIRVNALYADGRTSVADNRQQQSMGSLALDYTGRKLRWTLDAYTQHEDTRNF 287 Query: 353 RPQFSLGAALTAVPDAPSGKTNLYPGNTLQSDDKAVATRLEYDINDNLTAYGAVGYHVAE 412 RPQFS+G T++P AP+G +NLYPGNTLQ DDK VATRLEYD+ + LTAYGA+GYH Sbjct: 288 RPQFSIGT--TSMPSAPAGDSNLYPGNTLQIDDKVVATRLEYDLTEQLTAYGAIGYHEGA 345 Query: 413 SAQNFPRATITSVQGATSVTNGYYDQKVTSTSADVGLRTRFNTGGIKHTLIAGANMLNQQ 472 +AQ+FP ATIT + GATSV NGYYDQKV STSADVGLR RF TG ++HTL AN L+QQ Sbjct: 346 TAQSFPSATITGLDGATSVRNGYYDQKVVSTSADVGLRARFATGPVQHTLSMAANTLDQQ 405 Query: 473 TDYFYPAASAAVASNLYNPAPLPAMTGVRGNPTPRSQQRLTSLALTDTMSLIDDRLILIA 532 T YFY + VASNLY PAPL +T RG P P+SQ RL+ LALTDT+S+ D RL+L Sbjct: 406 TSYFYFVNATGVASNLYQPAPLAPVTAARGEPLPQSQTRLSGLALTDTLSIADGRLLLTG 465 Query: 533 GLRRQQVYTHSLTDAAQTSNKTAISPVMAVVVKPITNLSLYANYTAALTAGTIVQPPNAN 592 GLRRQQVY++S + +SNK SPV+ VVVKP+ NLSLYANYTA L+AG AN Sbjct: 466 GLRRQQVYSNSFS-TRSSSNKIGYSPVLGVVVKPLENLSLYANYTAGLSAGGFAGAQYAN 524 Query: 593 QGQAFPPSKSKQYETGAKMDWGRITTTAAVFQIEQRNNSTQLINGLQYVTQDGRARIRGL 652 GQAF P K+KQYE+G K+DWGR+TTTAAVFQIE+ N+ST ++ + TQDGRAR+RGL Sbjct: 525 AGQAFAPYKTKQYESGVKLDWGRVTTTAAVFQIERANSSTAVVGSQTFATQDGRARVRGL 584 Query: 653 ELAGYGELVRGLRFNASGTFFDTEQSHTTGGASDGRELGAVPKNNFNLGLDWDTPWLTGL 712 EL+ YGE RGLR ASGTFF+T QSHT GG +DG+E+GAVPK+NFNLG DWDTPWL GL Sbjct: 585 ELSAYGEAQRGLRLMASGTFFETRQSHTVGGTNDGKEIGAVPKHNFNLGADWDTPWLQGL 644 Query: 713 ALNTRITRTGATLYSNTSNLKVPGWTRTDIGARYITKAAGQVITYRANIENLFDKNYWVM 772 ALNTRI TGA+ YS+ + +KVPGWTR D+GARY ++ GQ ITYRAN+ENLFDK+YW+M Sbjct: 645 ALNTRIINTGASWYSDANTVKVPGWTRMDLGARYTSRLGGQTITYRANLENLFDKHYWIM 704 Query: 773 QNGYVGTSSGRTFVLSAQVDF 793 QNGY G +GRT VLSAQVDF Sbjct: 705 QNGYAGYGAGRTLVLSAQVDF 725 >gi|300309379|ref|YP_003773471.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 790 Score = 637 bits (1642), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/788 (44%), Positives = 483/788 (61%), Gaps = 23/788 (2%) Query: 17 AVLAAFAMPMTSLQAQAVDGQRLAYDIPAGPLDRVLNNFARRAGVLLSFDPAITHERQAA 76 A+L A + +T+ QAQA +Y IPAG L+ L F + AG+LLSF P T + Sbjct: 15 ALLLALSGSVTA-QAQAT---WRSYAIPAGKLEDALARFGQEAGLLLSFRPEQTAGMHSE 70 Query: 77 GLSGRYTVAEGFTVLLAGSGLQAVKNADGGYALS-VATIGSNNNAVLPTVTITESADPTA 135 GL+G+Y +G LLAG+GLQA++ A+G Y L V T+ S A LP VTI +AD T+ Sbjct: 71 GLAGQYESEQGLAALLAGTGLQAIRQANGSYLLKPVDTLAS---APLPAVTIRAAAD-TS 126 Query: 136 PYAGGLVARGGSLGVLGTASVMDTPFSTTNYTSQGIEDVQARAIGDVIANDSSVRNTNGN 195 YAG +ARGG+LGVLG +VMD P +T NYT++ ++D QAR + D + ND+S+R Sbjct: 127 AYAGAYLARGGALGVLGNRAVMDIPLATLNYTNELLQDQQARTVADAVLNDASIRMLTST 186 Query: 196 GGFGDSYQIRGFTMSANDVAFNGLYGMVPLTRMPIAMVERIEVLKGPGTLMYGMGPAGGV 255 GGFG++YQIRG+ +++ DV NGL+G+ RMP M+ER++VLKGPGTL++G+ P G + Sbjct: 187 GGFGETYQIRGYGLTSGDVGVNGLFGLASGNRMPAVMIERVDVLKGPGTLLHGISPEGSI 246 Query: 256 GGAVNLVSKRAHEDPISSVTATYLSNSQFGLKGDIGRRFGDNQEWGIRVNALYADGNTGL 315 GG++NLV+KRA ++P++ +TA Y S Q G++ D+GRRFG WGIR N + G + Sbjct: 247 GGSINLVTKRAEDEPLTRLTALYQSRRQPGVQVDLGRRFGTQDAWGIRFNTVLRRGEASI 306 Query: 316 SGSNQQQSMGSVGLDYSGRRVRWSLDAYTQHEDTRNFRPQFSLGAALTAVPDAPSGKTNL 375 +G Q G++ LDY GR RWSLDAY Q E++ +FRPQ +TA+P PSG + Sbjct: 307 AGGRQDAGAGALALDYRGRGWRWSLDAYRQRENSSDFRPQVGFLPGVTALPAPPSGDLDF 366 Query: 376 YPGNTLQSDDKAVATRLEYDINDNLTAYGAVGYHVAESAQNFPRATITSVQGATSVTNGY 435 + GN L D A+ TR+E ++++ L+AY AVG + + QN P ++ + GA SV N Y Sbjct: 367 FSGNQLSFQDDALLTRVEVELSEQLSAYAAVGQRRSATQQNLPTGSVDA-SGAGSVRNAY 425 Query: 436 YDQKVTSTSADVGLRTRFNTGGIKHTLIAGANMLNQQTDYFYPAASAAVASNLYNPAPLP 495 YD + SAD GLR + TG ++H + G L QQ Y ++ + A +LY PA LP Sbjct: 426 YDTASRTLSADAGLRLQAATGAVRHGVSLGVTRLRQQAGNAYLVSADSSAYSLYAPATLP 485 Query: 496 AMTGVRGNPTPRSQQRLTSLALTDTMSLIDDRLILIAGLRRQQVYTHSL--TDAAQTSN- 552 ++ R P L SL+LTDT+ L++DRL L+ G RRQ V S AQ S+ Sbjct: 486 VISAARTEPRKAYDMTLDSLSLTDTLRLLEDRLQLLVGARRQSVRYDSFDTVSGAQLSSY 545 Query: 553 -KTAISPVMAVVVKPITNLSLYANYTAALTAGTIVQPPNANQGQAFPPSKSKQYETGAKM 611 +AISP++ +VVKP+ LSLYAN T+ LT GTIV AN GQ P +S+Q E GAK+ Sbjct: 546 EASAISPLLGLVVKPVAGLSLYANTTSGLTRGTIVPTGLANAGQVLAPYRSRQLEAGAKL 605 Query: 612 DWGRITTTAAVFQIEQ------RNNSTQLINGLQYVTQDGRARIRGLELAGYGELVRGLR 665 DWGR+ T AA FQI+ ST + Y DGR R RGLEL+ YGEL+RGLR Sbjct: 606 DWGRVMTQAAWFQIDNPSAVITTQASTPASSSYGY---DGRQRNRGLELSAYGELMRGLR 662 Query: 666 FNASGTFFDTEQSHTTGGASDGRELGAVPKNNFNLGLDWDTPWLTGLALNTRITRTGATL 725 AS TF+ T G +DGR VP NL LDW+ L GLA + R+ TG Sbjct: 663 LLASATFYQARLLRTANGLNDGRTAPGVPLRAANLSLDWEPAGLPGLAFSGRMIHTGPVY 722 Query: 726 YSNTSNLKVPGWTRTDIGARYITKAAGQVITYRANIENLFDKNYWVMQNGYVGTSSGRTF 785 Y + L++P WTR D+G RY ++ + + +R N+ENLF+ + W++ YV ++ RT Sbjct: 723 YDAANTLRLPSWTRWDLGVRYRSRLGERPVVWRLNVENLFNHSTWLLDKPYVTVAAPRTV 782 Query: 786 VLSAQVDF 793 +LS QVD+ Sbjct: 783 LLSMQVDW 790 >gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 733 Score = 395 bits (1014), Expect = e-111, Method: Compositional matrix adjust. Identities = 253/712 (35%), Positives = 382/712 (53%), Gaps = 30/712 (4%) Query: 108 ALSVATIGSNNNAVLPTVTITESADPTA-----PYAGGLVARGGSLGVLGTASVMDTPFS 162 AL+ A + + LPTVT+ SAD +A +AGG VARG LGVLG +D+P Sbjct: 26 ALAQAQATAPDQQTLPTVTVNASADASADGLPAEFAGGQVARGSRLGVLGNVDNLDSPVR 85 Query: 163 TTNYTSQGIEDVQARAIGDVIANDSSVRNTNGNGGFGDSYQIRGFTMSANDVAFNGLYGM 222 + YT Q I D QA +GDV+ ND VR T G G F +SY IRGF +++D+ +NGL+G+ Sbjct: 86 SVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQESYMIRGFIANSDDLMYNGLFGI 145 Query: 223 VPLTRMPIAMVERIEVLKGPGTLMYGMGPA-GGVGGAVNLVSKRAHEDPISSVTATYLS- 280 +P + M+ER+EV G + G P G+GG +N+V KRA +P++ +T Y S Sbjct: 146 LPRQYVASEMMERVEVQYGASAFLNGATPGDAGLGGTINIVPKRAANEPLTDLTLGYESG 205 Query: 281 NSQFGLKGDIGRRFGDNQEWGIRVNALYADGNTGLSGSNQQQSMGSVGLDYSGRRVRWSL 340 NSQ+ D+ RRFG + G+R+NA G TG++ ++ ++ S+G+DY G R S Sbjct: 206 NSQYAAL-DVSRRFGPQERLGVRINAARHAGGTGVANERRETNLFSLGVDYRGNDFRLSA 264 Query: 341 DAYTQHEDTRNFRPQFSLGAALTAVPDAPSGKTNL-YPGNTLQSDDKAVATRLEYDINDN 399 D Q + N RP ++GA LT++P APSG N P + + D R E+D++ + Sbjct: 265 DLGLQENNLSNVRPSVTIGAGLTSLPVAPSGSANYGQPWSYSNARDLFGTVRGEWDLSSS 324 Query: 400 LTAYGAVGYHVAESAQNFPRATITSVQGATSVTNGYYDQKVTST-SADVGLRTRFNTGGI 458 TA+ A G + +T+ + T + + + + +VG+RT TG + Sbjct: 325 TTAWAAFGARQGTENNSLSGVRVTNASTGAAATYRFDNARQDDVATGEVGVRTHLQTGAV 384 Query: 459 KHTLIAGANM--LNQQTDYFYPAASAAVASNLYNPA--PLPAMTGV---RGNPTPRSQQR 511 H L+A A+ LN + Y + S A+A+NLYNP PA+T + +P + Sbjct: 385 SHKLVAAASAYSLNSRNAYGL-SPSYALATNLYNPTNYAQPALTSLGNSLADPQTTIKTN 443 Query: 512 LTSLALTDTMSLIDDRLILIAGLRRQQVY--THSLTDAAQTS--NKTAISPVMAVVVKPI 567 L S ++DT+ DDR+++ G+R+QQ+ T++ A T+ +++A SP+ VV K Sbjct: 444 LLSAVVSDTLGFYDDRVLVTVGVRQQQLKSDTYAYNTQANTAHYDQSATSPMAGVVFKLT 503 Query: 568 TNLSLYANYTAALTAGT-IVQPPNANQGQAFPPSKSKQYETGAKMDWGRITTTAAVFQIE 626 LS+Y NY L G I AN GQ P KSKQ E G K + G + AA F + Sbjct: 504 KTLSVYGNYIEGLQQGKQITDTTAANYGQVLAPYKSKQKEVGVKYELGGLGLGAAFFTTD 563 Query: 627 QRNNSTQLINGLQYVTQDGRARIRGLELAGYGELVRGLRFNASGTFFDTEQSHTTGGASD 686 + + + ++ +G+ R RG+EL YGE+ +G+R + TF D +Q T A++ Sbjct: 564 RPLSYKDAVTNIE--ATNGKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQVQTNSSANN 621 Query: 687 GRELGAVPKNNFNLGLDWDTPWLTGLALNTRITRTGATLYSNTSNLKVPGWTRTDIGARY 746 G+ VP+ N GL+ D P + GL LN R T T + L+VP W R D+GARY Sbjct: 622 GKYAIGVPRVQANAGLEVDVPGVRGLTLNGRATYTSTQYVDAANQLEVPSWVRYDLGARY 681 Query: 747 ITKAAGQVITYRANIENLFDKNYW-----VMQNGYVGTSSGRTFVLSAQVDF 793 +T G +T RA+I+N+ ++NYW +GY+ + RTF S V F Sbjct: 682 LTDIGGHAVTLRASIDNVANRNYWQSAGGASNSGYLVAGNPRTFSTSVSVAF 733 >gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 723 Score = 190 bits (483), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 202/705 (28%), Positives = 311/705 (44%), Gaps = 55/705 (7%) Query: 122 LPTVTITESADPTAPYAGGLVARGGSLGVLGTASVMDTPFSTTNYTSQGIEDVQARAIGD 181 LPT+ +T S A G AR S+ A ++DTP S + TS ++D Q+R + D Sbjct: 41 LPTINVTASG------ATGTQARSASVAGFDDAPLLDTPASVSVVTSAQMKDQQSRLLSD 94 Query: 182 VIANDSSVRNTNGNGGFGDSYQIRGFTMS-ANDVAFNGLYGMVPLTRMPIAMVERIEVLK 240 V+ ND+S+ G+ +++ IRGFT+ A+ NGL T + + ER+E LK Sbjct: 95 VVKNDASINENYAPVGYYENFSIRGFTLDPASAYRVNGLTVAGEQT-IALENKERVEFLK 153 Query: 241 GPGTLMYGMGPAGGVGGAVNLVSKRAHEDPISSVTATYLSNSQFGLKGDIGRRFGDNQEW 300 G L G+ AGG+ VN V+KR + S+T SN L D+G FG+++++ Sbjct: 154 GVAGLQAGVVAAGGL---VNYVTKRPAN--VRSITLGTDSNGSRYLATDLGALFGEHKQF 208 Query: 301 GIRVNALYADGNTGLSGSNQQQSMGSVGLDYS-GRRVRWSLDAYTQHEDTRNFRPQFSLG 359 G+R+NA + D ++ +S + + S+ ++ R DA Q + R+ LG Sbjct: 209 GLRINAAHEDIHSYVSNGDGWRDFASLSATWAISARTLVQFDAEYQQKAQRSVAGYQLLG 268 Query: 360 AALTAVPDAPSGKTNLYPGNTLQS-DDKAVATRLEYDINDNLTAYGAV----GYHVAESA 414 A +P S T L P Q D +V RL D N G V V + Sbjct: 269 GA--TLPSGVSPSTMLTPQPWSQPVRDSSVNARLRIDTEFNADWRGYVQAGRSRAVIDDY 326 Query: 415 QNFPRATITSVQGA--TSVTNG---YYDQKVTS--------TSADVGLRTRFNTGGIKHT 461 FP S GA T NG YD +V + + +G +F +G ++H Sbjct: 327 LAFPYG---SGNGASPTFAANGDFDVYDYRVPNDERRNDEVQAVAIG---KFASGWVQHE 380 Query: 462 LIAGANMLNQQTDYFYPAASAAVASNLYNPAP-LPAMTGVRGNPTPRSQQRLTSLALTDT 520 L G M + D + N+YN P LPA V R +L +D Sbjct: 381 LTLGMAMSRRIVDKSDGISVLVGQGNIYNGTPVLPAANAVIPAAYRNLDSRQKALFFSDR 440 Query: 521 MSLIDDRLILIAGLRRQQVYTHSLTDAAQTSNKTA---ISPVMAVVVKPITNLSLYANYT 577 M R ++AG R+ + S + T+ P +A++ KP+ NLSLY +Y Sbjct: 441 MQF-SQRWQVLAGGRQVWLNEQSFNSTGAVTRDTSRNLFLPQLALIFKPVQNLSLYGSYA 499 Query: 578 AALTAGTIVQPPNANQGQAFPPSKSKQYETGAKMDWG-RITTTAAVFQIEQRNNSTQLIN 636 L+ G+ +N PPS ++Q E G K ++ + TAAVF+ + + N Sbjct: 500 ETLSLGSSAPFWVSNFPVTLPPSVARQLEAGVKYEFSPELALTAAVFRTRKAYEYQKPDN 559 Query: 637 ---GLQYVTQDGRARIRGLELAGYGELVRGLRFNASGTFFDTEQSHTTGGASDGRELGAV 693 G YV Q G+ G+EL G+L L A+ T S T D +++ V Sbjct: 560 SPTGFTYV-QQGQQTNTGVELGANGKLTPRLAIGAAATVLRARASDTGTARFDDQQVVNV 618 Query: 694 PKNNFNLGLDWDTPWLTGLALNTRITRTGATLYSNTSNLKVPGWTRTDIGARYITKAAGQ 753 P+ + D+ P + G+ + + + + ++ +P + G RY + G Sbjct: 619 PRLRTAVYADYAVPGMEGVNVMGSWNYSASKPATRDGSVNLPAVHVFNAGLRYQLRVNGH 678 Query: 754 VITYRANIENLFDKNYW-----VMQNGYVGTSSGRTFVLSAQVDF 793 T RANI+NLFDK YW + +GYV + RT LS Q DF Sbjct: 679 AATLRANIDNLFDKRYWKDAGQYLGDGYVHLGAPRTARLSLQYDF 723 >gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 832 Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 186/712 (26%), Positives = 298/712 (41%), Gaps = 66/712 (9%) Query: 30 QAQAVDGQRLAYDIPAGPLDRVLNNFARRAGVLLSFDPAITHERQAAGLSGRYTVAEGFT 89 QAQ R +++ AGPL+ LN FAR+AG+ +S+ A+ RQ L G Y+V++G Sbjct: 60 QAQGAPEARRHFNVAAGPLEDALNRFARQAGITMSYASALVQGRQVTALQGEYSVSQGLE 119 Query: 90 VLLAGSGLQAVKNADGGYALSVATIGSNNNA----VLPTVTITESAD-PTA--PYAGGLV 142 VLLAGSGL+AV++ +G YAL G+ L +T++ D P A P G + Sbjct: 120 VLLAGSGLRAVRSDNGAYALQPLVQGAPEQVDTLHRLGNITVSGRRDEPGAADPVEGYVA 179 Query: 143 ARGGSLGVLGTASVMDTPF-----STTNYTSQGIEDVQARAIGDVIANDSSVRNTNGNG- 196 R TA+ DTP S + T +E A +I DV+ NT +G Sbjct: 180 LRS------ATATKTDTPLLELAQSVSVVTRAEMEARGANSILDVLRYMPGA-NTETHGV 232 Query: 197 ---GFGDSYQIRGFTMSANDVAF-NGL------YGMVPLTRMPIAMVERIEVLKGPGTLM 246 G+ D + +RGF + + NGL +GM R +ER+EVL+G + Sbjct: 233 DPRGY-DYFNLRGFINAQTTSNYLNGLRQIPSGFGMF---RTETYGLERVEVLRGANSAS 288 Query: 247 YGMGPAGGVGGAVNLVSKRAHEDPISSVTATYLSNSQFGLKGDIGRRFGDNQEWGIRVNA 306 +G GGV VN VSK A + + S + + D+ R+ Sbjct: 289 FGQADPGGV---VNRVSKLAGSGARNELMVDVGSFQRRQVAADLSGDLDPEGRVQARLVG 345 Query: 307 LYADGNTGLSGSNQQQSMGSVGLDYSGRRVRWSLDAYTQHEDTRNFRPQFSLGAALTAVP 366 L DG+T +N + ++R S D T + S TAV Sbjct: 346 LLLDGDTQFRYANGRAGDNDRLYLAPSLKIRPSAD--TSLILLAEYLKDRSGSGRWTAV- 402 Query: 367 DAPSGKTNLYPGNTLQSDDKAVATRLEYDINDNLTAYGAVGYHVAESAQNFPRATIT--S 424 A +T+ G+ + L + + L A + H ++A A + S Sbjct: 403 RADGSQTHTLLGDPDFDQQRGEQWSLGWMLEHRLDATWTLRQHFRQAALRSQYAAVNPGS 462 Query: 425 VQGAT-SVTNGYYDQKVTSTSADVGLRTRFNTGGIKHTLIAG---ANMLNQQTDYFYPAA 480 G+ S + YD +V +T D R G +H ++ G ++M ++ Y A Sbjct: 463 FNGSILSRSTAVYDTQVENTLLDNQALARVQWGQAEHQVLLGLDWSHMSAREQRYRGVAP 522 Query: 481 SAAVASNLYNPAPLPAMTGVRGNPTPRSQQRLTSLALTDTMSLIDDRLILIAGLR--RQQ 538 S + + +Y P+PA T G+ Q L L + R++L G R R + Sbjct: 523 SLDIDNPVYT-QPIPAATTRFGD----LDQTLVQTGLYAQDQIRYQRIVLTLGARYDRSR 577 Query: 539 VYT-HSLTDAAQTSNKTAISPVMAVVVKPITNLSLYANYTAALTAGTIVQPPNANQ---G 594 T ++ ++ Q + + A S + + L+ Y +Y ++ P A Q G Sbjct: 578 DSTRNAANNSLQAAEENAFSGRVGLSYLVSPELAPYVSYGSSFL-------PQAGQDVDG 630 Query: 595 QAFPPSKSKQYETGAKMD--WGRITTTAAVFQIEQRNNSTQLINGLQYVTQDGRARIRGL 652 + F + ++Q E G K GR TAA++Q+ + N + +G+ R RG+ Sbjct: 631 KPFKAATARQIEAGVKYQPGHGRAVYTAALYQLVKDNALGSDPLHANFSVSNGQVRSRGV 690 Query: 653 ELAGYGELVRGLRFNASGTFFDTEQSHTTGGASDGRELGAVPKNNFNLGLDW 704 EL GEL+ GL A+ T+ + G+ VP+ +L LD+ Sbjct: 691 ELEAKGELLPGLNVTAAYTYAQVVNTQNAAPELIGKTPILVPRQAASLWLDY 742 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.315 0.131 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,496,035 Number of extensions: 109258 Number of successful extensions: 408 Number of sequences better than 1.0e-08: 19 Number of HSP's gapped: 356 Number of HSP's successfully gapped: 23 Length of query: 793 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 700 Effective length of database: 1,179,515 Effective search space: 825660500 Effective search space used: 825660500 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)