BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0417.p (695 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein... 445 e-126 gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor prote... 409 e-115 gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore rece... 369 e-103 gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisideropho... 268 1e-72 gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 235 7e-63 >gi|300311660|ref|YP_003775752.1| TonB-dependent receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 445 bits (1144), Expect = e-126, Method: Compositional matrix adjust. Identities = 288/695 (41%), Positives = 404/695 (58%), Gaps = 42/695 (6%) Query: 23 LPQIDVSAESDKETAKGPVRGYVARRSATGSKTDSALIETPQAISVITRDQIEDRGALNL 82 LPQ+++ A D ETA GPV GYVA+R+A+ +KTD+ ++E PQ++SV+TRD+++ RG +L Sbjct: 31 LPQVEIKA--DAETANGPVNGYVAKRTASATKTDTPVLEVPQSVSVVTRDEMDARGVTSL 88 Query: 83 QETMRYSAGIRAEAYGFDNRG-DWSTVRGV--APVI--YLDGLQMSFGSYTNIRPDVYML 137 + +RY G +E +G D RG ++ +RG A V +L+GL+ G + R + Y + Sbjct: 89 LDVLRYMPGANSETHGVDPRGYEYFNLRGFINAQVTSNFLNGLRQIPGGFGQFRTETYGM 148 Query: 138 ERVEVLHGPSSVLYGQGSVGGIVNMTSKMPQAERMNEIGVQLGLNNRKQISGDFTGAFDD 197 ER+EVL GP SV +GQ GG++N SK+P + NE+GV +G NRKQ+ D G Sbjct: 149 ERIEVLRGPGSVTFGQADPGGVINRVSKLPGMDIPNELGVDIGSFNRKQVVADLNG-HTQ 207 Query: 198 DGKLLYRLVVVGRESDTDVDYV-----PDNRTLVAPSLTWRPNADTSLTLYARYQKDVSG 252 DG+ L+R+V +G +S+ + +NR +APSLTWRP+A TSLTL A Y D SG Sbjct: 208 DGEYLWRVVGLGLDSNNQYKFNNGQSGDNNRFYLAPSLTWRPSASTSLTLMADYMNDRSG 267 Query: 253 SSVGFFPWRGTLYAAPNGQISTSRFISEPGFDDFTAKQRSAGYQFEHKFSPNLAFRQNLR 312 SS R T A G + T I +P FD + Q S GYQFEHKF FRQN R Sbjct: 268 SS------RWT--AVRPGNVLTHTLIGDPNFDRQSNDQWSFGYQFEHKFDNAWTFRQNFR 319 Query: 313 YTNSEVNYQSIYARFSPAPALNADNRSINRTVYINRPQVISAVADTQMEARLNSGALQHT 372 + N +S+YA +P L + TVY QV + + D Q+E RL GA +HT Sbjct: 320 ----QANLKSVYAALNPG-TLTGSVLTRGTTVY--NSQVDNTLVDNQLEGRLKWGATEHT 372 Query: 373 VLAGLDYQRAVTNGVSGSGNTTAIDVYTPVYGNYTLP---VLRRAAEATQRQTGVYLQDQ 429 VL GLD+ R V G ++++ PVYG T+P L E QTG+Y QDQ Sbjct: 373 VLFGLDWSRMYDREVRYRGAAPSLNIDNPVYG-VTIPAATTLFGNLEENMNQTGLYAQDQ 431 Query: 430 IK-SGAWTALLAVRRDWSKSDTAN---TPSAARDDTALTKRAGLVYQFENGIAPYISYAE 485 IK T L R D K +T N + DD+AL+ R GL Y IAPY+SYA Sbjct: 432 IKFDQRLTLTLGGRWDKVKDETRNYFNRTTTRSDDSALSGRIGLSYLVTRDIAPYVSYAT 491 Query: 486 SFQPLGGFDFYNTPYKPTRGKQTEVGVKFQPAGSRSSYTAALYDLSELNRKTTDPTNPSN 545 SF P G DF P+ PT+ +Q EVG+K+QPA ++ +TAAL++L++ N +T DP + + Sbjct: 492 SFLPQTGSDFNGKPFDPTKARQAEVGIKYQPADGKTLFTAALFELTKTNVQTPDPAHTNF 551 Query: 546 SIQIGEAQVRGLELEATTELNRQWTMTAGYSYTDAKVARSN-GTDNGKRLAGIPEHMASL 604 ++ GE + RGLELEA E+ + ++A Y+YTD K ++N + GK+ +P AS+ Sbjct: 552 NVLSGEIKSRGLELEAKGEIVKGLNLSASYTYTDVKNTQNNTASLLGKQPILVPRQAASV 611 Query: 605 WATYRFN-GALAGLTLGGGARYVGTSY-DGMDNNPIPSVTLADAMMSYNAGSWMYRFNVN 662 WA Y G LAG +GGGARY G++Y D + VT+ DA+ YN W Y N++ Sbjct: 612 WADYTVQGGPLAGAGIGGGARYTGSNYADAANTVKNGGVTVFDAVFHYNLNRWRYALNIS 671 Query: 663 NLFDKTYVSVCLAR--GDCFYGARRSAVLSATYRF 695 N+ +K Y S CLA CF+ A R+A+LSA YR+ Sbjct: 672 NITNKEYTS-CLAEPTTTCFWAAERTAILSARYRW 705 >gi|300313794|ref|YP_003777886.1| ferrichrome-iron receptor protein [Herbaspirillum seropedicae SmR1] Length = 817 Score = 409 bits (1052), Expect = e-115, Method: Compositional matrix adjust. Identities = 263/722 (36%), Positives = 392/722 (54%), Gaps = 43/722 (5%) Query: 1 LPVTFSALLAGAVLPQAQAQETLPQIDVSAESDKETAKGPVRGYVARRSATGSKTDSALI 60 +P + +A + A P A +LP I +SA +D + + AR SA+ +KT + LI Sbjct: 112 VPASEAATPSAATTPAASG--SLPAIQISASADPGEQR-----WTARDSASTTKTATPLI 164 Query: 61 ETPQAISVITRDQIEDRGALNLQETMRYSAGIRAEAYGFDNRGDWSTVRGV---APVIYL 117 E PQ+ISV+T ++I GA ++ + Y+ G+ YG D+R DW +RG +P YL Sbjct: 165 EVPQSISVVTAERIAAMGATTARDALGYTPGVNISPYGSDSRYDWINLRGFDAYSPGFYL 224 Query: 118 DGLQM-SFGSYTNIRPDVYMLERVEVLHGPSSVLYGQGSVGGIVNMTSKMPQAERMNEIG 176 DGL + + S+ R + Y +E++ VL GP+SVLYGQ GG+VN+ SK+P A+ E+ Sbjct: 225 DGLPLRNANSFAVWRTENYGIEQLAVLRGPASVLYGQAGPGGVVNVVSKLPSADAPRELQ 284 Query: 177 VQLGLNNRKQISGDFTGAFDDDGKLLYRLVVVGRESDTDVDYVPDNRTLVAPSLTWRPNA 236 VQLG + R+Q+ D GA D DG+LLYR++ V R+++ + ++R +APSL W+ +A Sbjct: 285 VQLGSDRRRQVGADIGGAIDADGRLLYRVIGVVRDAELPAGGMKNDRLYLAPSLVWKISA 344 Query: 237 DTSLTLYARYQKDVSGSSVGFFPWRGTLYAAPNG-QISTSRFISEPGFDDFTAKQRSAGY 295 TSLTL A +D G P G+L G I + + P FD F+ Q GY Sbjct: 345 ATSLTLQAALLRDQGGVYTRTRPLVGSLVPTAIGTTIPSELYTGNPHFDHFSQDQELFGY 404 Query: 296 QFEHKFSPNLAFRQNLRYTNSEVNYQSIYA-RFSPAPALNADN----RSINRTVYINRPQ 350 + H+F AF Q+ R + +Y+++ RF+ A N ++ +++ R ++ +R Sbjct: 405 RLAHRFDERFAFTQSARVGHMSTDYRAVQTPRFATLNAANPNDPVNFQNLTRNLFGSRES 464 Query: 351 VISAVADTQMEARLNSGALQHTVLAGLDYQRAVTNGVSGSGNTTA-IDVYTPVY--GNYT 407 D Q++A ++GA++HTVLAG+DYQR+ + VS SG + +++ P Y G + Sbjct: 465 ATMFSIDNQLQADFSTGAVRHTVLAGVDYQRSRFDAVSFSGGSAPLLNIAAPSYPNGPFV 524 Query: 408 LPVLRRAAEATQRQTGVYLQDQIK-SGAWTALLAVRRDWSKSDTANTPSAAR---DDTAL 463 +P A QTG+YLQDQIK + W L R D + S N +R D Sbjct: 525 VPAPYSDNRAVLTQTGIYLQDQIKWNNGWEVTLGGRHDSASSTVDNRLDGSRTSSTDRKF 584 Query: 464 TKRAGLVYQFENGIAPYISYAESFQPLGGFD-FYNTPYKPTRGKQTEVGVKFQPAGSRSS 522 T+RA ++Y NG+APY+SY ESF P + N + P GKQTEVG+++QP G+ Sbjct: 585 TRRAAVLYHAANGLAPYLSYTESFNPTATVNPLTNQSFGPETGKQTEVGLRYQPPGTNDL 644 Query: 523 YTAALYDLSELNRKTTD----PTNPSNSIQIGEAQVRGLELEATTELNRQWTMTAGYSYT 578 Y+AAL+DL N + D PT Q GE VRGLELEA T+ +TA YSYT Sbjct: 645 YSAALFDLKRQNYISYDANFMPT------QKGEIAVRGLELEAVTQPMAALRLTAAYSYT 698 Query: 579 DAKV--ARSNGTDNGKRLAGIPEHMASLWATYRFNGALAGLTLGGGARYVGTSYDGMDNN 636 V A S + GK+ A + H S+W +R G+ LG GARYV + Sbjct: 699 PRAVVTASSRPAEIGKQAAAVLLHQFSVWGDHRLGN---GVRLGLGARYVSATSGNGGGT 755 Query: 637 P--IPSVTLADAMMSYNAGSWMYRFNVNNLFDKTYVSVCLARGD-CFYGARRSAVLSATY 693 P +P TL D ++ Y+ W N+ NL DK Y++ C C+YG +RS + +A+Y Sbjct: 756 PVKVPGYTLLDGLLGYDFARWSLALNLRNLTDKRYLTNCDTTASMCYYGDQRSVLATASY 815 Query: 694 RF 695 R+ Sbjct: 816 RW 817 >gi|300311652|ref|YP_003775744.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 832 Score = 369 bits (946), Expect = e-103, Method: Compositional matrix adjust. Identities = 253/700 (36%), Positives = 356/700 (50%), Gaps = 36/700 (5%) Query: 16 QAQAQETLPQIDVSAESDKETAKGPVRGYVARRSATGSKTDSALIETPQAISVITRDQIE 75 Q L I VS D+ A PV GYVA RSAT +KTD+ L+E Q++SV+TR ++E Sbjct: 149 QVDTLHRLGNITVSGRRDEPGAADPVEGYVALRSATATKTDTPLLELAQSVSVVTRAEME 208 Query: 76 DRGALNLQETMRYSAGIRAEAYGFDNRG-DWSTVRGVAPVI----YLDGLQMSFGSYTNI 130 RGA ++ + +RY G E +G D RG D+ +RG YL+GL+ + Sbjct: 209 ARGANSILDVLRYMPGANTETHGVDPRGYDYFNLRGFINAQTTSNYLNGLRQIPSGFGMF 268 Query: 131 RPDVYMLERVEVLHGPSSVLYGQGSVGGIVNMTSKMPQAERMNEIGVQLGLNNRKQISGD 190 R + Y LERVEVL G +S +GQ GG+VN SK+ + NE+ V +G R+Q++ D Sbjct: 269 RTETYGLERVEVLRGANSASFGQADPGGVVNRVSKLAGSGARNELMVDVGSFQRRQVAAD 328 Query: 191 FTGAFDDDGKLLYRLVVVGRESDTDVDYV-----PDNRTLVAPSLTWRPNADTSLTLYAR 245 +G D +G++ RLV + + DT Y ++R +APSL RP+ADTSL L A Sbjct: 329 LSGDLDPEGRVQARLVGLLLDGDTQFRYANGRAGDNDRLYLAPSLKIRPSADTSLILLAE 388 Query: 246 YQKDVSGSSVGFFPWRGTLYAAPNGQISTSRFISEPGFDDFTAKQRSAGYQFEHKFSPNL 305 Y KD SGS R T A Q T + +P FD +Q S G+ EH+ Sbjct: 389 YLKDRSGSG------RWTAVRADGSQTHT--LLGDPDFDQQRGEQWSLGWMLEHRLDATW 440 Query: 306 AFRQNLRYTNSEVNYQSIYARFSPAPALNADNRSINRTVYINRPQVISAVADTQMEARLN 365 RQ+ R + +S YA +P + + ++R+ + QV + + D Q AR+ Sbjct: 441 TLRQHFR----QAALRSQYAAVNPG---SFNGSILSRSTAVYDTQVENTLLDNQALARVQ 493 Query: 366 SGALQHTVLAGLDYQRAVTNGVSGSGNTTAIDVYTPVYGNYTLPVLRRAAEATQR--QTG 423 G +H VL GLD+ G ++D+ PVY R + Q QTG Sbjct: 494 WGQAEHQVLLGLDWSHMSAREQRYRGVAPSLDIDNPVYTQPIPAATTRFGDLDQTLVQTG 553 Query: 424 VYLQDQIKSGAWTALLAVRRDWSKSDT---ANTPSAARDDTALTKRAGLVYQFENGIAPY 480 +Y QDQI+ L R D S+ T AN A ++ A + R GL Y +APY Sbjct: 554 LYAQDQIRYQRIVLTLGARYDRSRDSTRNAANNSLQAAEENAFSGRVGLSYLVSPELAPY 613 Query: 481 ISYAESFQPLGGFDFYNTPYKPTRGKQTEVGVKFQPAGSRSSYTAALYDLSELNRKTTDP 540 +SY SF P G D P+K +Q E GVK+QP R+ YTAALY L + N +DP Sbjct: 614 VSYGSSFLPQAGQDVDGKPFKAATARQIEAGVKYQPGHGRAVYTAALYQLVKDNALGSDP 673 Query: 541 TNPSNSIQIGEAQVRGLELEATTELNRQWTMTAGYSYTDAKVARSNGTD-NGKRLAGIPE 599 + + S+ G+ + RG+ELEA EL +TA Y+Y ++ + GK +P Sbjct: 674 LHANFSVSNGQVRSRGVELEAKGELLPGLNVTAAYTYAQVVNTQNAAPELIGKTPILVPR 733 Query: 600 HMASLWATYRFN-GALAGLTLGGGARYVGTSYDGMDNN-PIPSVTLADAMMSYNAGSWMY 657 ASLW Y G LAG+ +G GARY G +Y N + + DAM+ + G W Y Sbjct: 734 QAASLWLDYTVQRGDLAGMGVGAGARYTGRNYATAANTVENAAQVILDAMVRIDRGPWRY 793 Query: 658 RFNVNNLFDKTYVSVCLARG--DCFYGARRSAVLSATYRF 695 FNV+NL ++ Y S CLA CF+ R+AVLSA YR+ Sbjct: 794 AFNVSNLANRQYTS-CLAEPTLTCFWAPERTAVLSARYRW 832 >gi|300310824|ref|YP_003774916.1| hydroxamate-type ferrisiderophore receptor signal peptide protein, tonB-dependent receptor [Herbaspirillum seropedicae SmR1] Length = 715 Score = 268 bits (684), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 217/721 (30%), Positives = 338/721 (46%), Gaps = 57/721 (7%) Query: 4 TFSALLAGAVLPQAQAQET------LPQIDVSAESDKETAKGPVRGYVARRSATGSKTDS 57 T S++LA PQ + LP + V+A+ ++ + V +K+ + Sbjct: 23 TSSSVLAQTAPPQGADSSSTAASAALPTVSVTADGYTDSKFKATQTQV-------NKSST 75 Query: 58 ALIETPQAISVITRDQIEDRGALNLQETMRYSAGIRAEAYGFDNRGDWS--TVRG--VAP 113 L ETPQ+ISV+TR ++ + A++L + ++ +G+ A+ YG R W +RG + Sbjct: 76 PLSETPQSISVVTRAMMDSQQAVSLSDALKNVSGVVAQQYG---RRGWDDLIIRGQVASD 132 Query: 114 VIYLDGLQMSFGSYTNIRPDVYMLERVEVLHGPSSVLYGQGSVGGIVNMTSKMPQAERMN 173 +YLDGL+ + S + +Y L++VEVL GP S+LYG GG+VNM SK PQ Sbjct: 133 SLYLDGLRTTASS--RVAEQLYGLQQVEVLKGPGSLLYGLVLPGGLVNMVSKRPQGSDFA 190 Query: 174 EIGVQLGLNNRKQISGDFTGAFDDDGKLLYRLVVVGRESDTDVDYVPDNRTLVAPSLTWR 233 + V +G ++ Q + D + ++GK +R+ + SD D+V +APSL+ Sbjct: 191 NVDVTIGSHDLYQSTVDLNKSLSENGKQAFRINGLISNSDDATDHVWFKNRYIAPSLSLD 250 Query: 234 PNADTSLTLYARYQKDVSGSSVGFFPWRGTLYAAPNGQISTSRFISEPGFDDFTAKQRSA 293 A T T+ YQ+ G P G++ +G ++ S FI EPG + A + Sbjct: 251 LGARTDFTILTSYQERNYVRQQGL-PLSGSITPNASGPLARSLFIGEPGARPYAANETRI 309 Query: 294 GYQFEHKFSPNLAFRQNLRYTNSEVNYQSIYARFSPAPALNADNRSINRTVYINRPQVIS 353 GY H+F NLRY ++ Q I N S+ R+ + + Sbjct: 310 GYSLTHRFDDGWTLNNNLRYQQFTMSGQLISIN-------NLTGTSLTRSAMDQTFEGQT 362 Query: 354 AVADTQMEARLNSGALQHTVLAGLDY------QRAVTNGVSGSGNTTAIDVYTPVYG-NY 406 DT ++ + +H V G DY +R +T V+ N +Y P YG Sbjct: 363 FTMDTNVQRSFATAWGKHEVTLGTDYMNSRELERTLTCSVTPLSN-----IYNPSYGARV 417 Query: 407 TLPVLRRAAEA-----TQRQTGVYLQDQIKSGA-WTALLAVRRDWSKSDTANTPSAARDD 460 P + A + R TG Y +D+I G W L VR+D + + T + + + D Sbjct: 418 VCPTQLTSTNAKLNDTSVRDTGFYARDKISLGERWQLLAGVRQDRAATYTTSALTGSHSD 477 Query: 461 TALTKRAG---LVYQFENGIAPYISYAESFQPLGGFDFYNTPYKPTRGKQTEVGVKFQPA 517 A + ++ + +G+ PY+SYA SF P G F + +KP GKQ E GVK Sbjct: 478 NASSATTASAAIMVELWHGVRPYLSYATSFYPNSGTAFDGSIFKPETGKQWETGVKVDLD 537 Query: 518 GSRSSYTAALYDLSELNRKTTDPTNPSNSIQIGEAQVRGLELEATTELNRQWTMTAGYSY 577 R+S AL+DL N TDP + S + IG + +G E+ T++L ++ A YSY Sbjct: 538 EGRTSINFALFDLRRRNVLVTDPDHTSYKMAIGGQRSQGGEISVTSDLRNGLSLNAAYSY 597 Query: 578 TDAKVARSNG---TDNGKRLAGIPEHMASLWATYRFNGALAGLTLGGGARYVGTSYDGMD 634 T A V G T G+ L +P H + A YRF+G L+G L GG R G S + Sbjct: 598 TAAIVIDDGGQRSTTVGQWLDNVPRHNFTTSARYRFSGELSGWELNGGVR--GQSMMRTN 655 Query: 635 NNPIPSVTLADAMMSYNAGSWMYRFNVNNLFDKTYVSVCLARGDCFYGARRSAVLSATYR 694 +P LAD ++YNA W NV N+F+ Y + L + G R+ +L+ YR Sbjct: 656 GYTLPGYVLADIGVAYNAERWRTALNVKNVFNTEYYAGGLGKAVAL-GDDRTVMLTLGYR 714 Query: 695 F 695 + Sbjct: 715 Y 715 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 235 bits (600), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 201/685 (29%), Positives = 314/685 (45%), Gaps = 46/685 (6%) Query: 36 TAKGPVRGYVARRSATGSKTDSALIETPQAISVITRDQIEDRGALNLQETMRYSAGIRAE 95 T +G + Y +++ ++T++ L E PQ++ V++R I+D A L + + Y +G+ A Sbjct: 42 TGQGERQQYRQSSTSSATRTETPLQELPQSVQVVSRQLIDDLAATRLDDVLLYVSGV-AR 100 Query: 96 AYGFDNRGDWSTVRGVAPVIY--LDGLQMSFGSYTNIRP--DVYMLERVEVLHGPSSVLY 151 F D ++RG + ++ L F S P D+ +E V+ L GP++ LY Sbjct: 101 QNNFGGLWDNYSIRGFSGSENGGMNILWNGFASNRGYAPPRDMANVESVDFLKGPAAALY 160 Query: 152 GQGSVGGIVNMTSKMPQAERMNEIGVQLGLNNRKQISGDFTGAFDDDGKLLYRLVVVGRE 211 G GG +N+ +K PQ + N + + +G N+ + + D TGA + YRL Sbjct: 161 GNSEPGGTINVVTKKPQFKSANALDLSIGSNDAYRSAVDSTGALSS--TVAYRLNAAMEH 218 Query: 212 SDTDVDYVPDNRTLVAPSLTWRPNADTSLTLYARYQKDVSGSSVGFFPWRGTLYAAPNGQ 271 + D V R AP+ TW +T L + + + G G G Sbjct: 219 KGSMRDQVRSEREFFAPAFTWLLTENTILNYEGEFLRQKAPLDRGIVAVNGNA-----GV 273 Query: 272 ISTSRFISEPGFDDFTAKQRSAGYQFEHKFSPNLAFRQNLRYTNSEVNYQSIYARFSPAP 331 + SRF+ EP D + ++ E + + N R + + ++ S + A Sbjct: 274 LPVSRFLGEPNDGDIKMQNQNHLLTLEQRLNENWHLRTGIFHKEGSLDGYS-----TEAF 328 Query: 332 ALNADNRSINRTVYINRPQVISAVADTQMEARLN----SGALQHTVLAGLDY------QR 381 AL ADN ++ R R + DT ++A + + + H VL G + QR Sbjct: 329 ALQADNATLRR----QRRYRDYSWHDTSLQAEIGGKFATAGVGHEVLVGTEVDWLTLDQR 384 Query: 382 AVTNGVSGSGNTTAIDVYTPVYGNYTLPVLRRAAEATQRQ--TGVYLQDQIK-SGAWTAL 438 + S A+++Y PVYG P + ++RQ TG+YLQDQ+ S W L Sbjct: 385 MLRINPSNVA-PYAVNIYNPVYGQ-AQPTPTANTDTSERQISTGLYLQDQLSLSERWRLL 442 Query: 439 LAVRRDWSKSDTANTPSAA---RDDTALTKRAGLVYQFENGIAPYISYAESFQPLGGFDF 495 VR D +S N + A +D A + R GL Y + Y+S ++SF+P G D Sbjct: 443 AGVRADAFRSTLNNLRNGAVTRQDKHAYSPRLGLTYLLTPSWSVYVSASKSFRPNSGSDV 502 Query: 496 YNTPYKPTRGKQTEVGVKFQPAGSRSSYTAALYDLSELNRKTTDPTNPSNSIQIGEAQVR 555 + P + E G+KFQ RS T A++D+++ N TTDP NP+ SI GE + + Sbjct: 503 SGNAFSPETSRAAEAGLKFQSEDKRSGATLAVFDITKQNVLTTDPANPNFSIAAGEVRSK 562 Query: 556 GLELEATTELNRQWTMTAGYSYTDAKVARSNGTDNGKRLAGIPEHMASLWATYR---FNG 612 G+EL+A L W +T +YTDA V+R N G RL IP ASL A + +G Sbjct: 563 GVELDANARLGHHWRVTGNLAYTDAYVSRDNTLPVGSRLVNIPRSSASLLAVFEDADAHG 622 Query: 613 ALAGLTLGGGARYVG-TSYDGMDNNPIPSVTLADAMMSYNAGSWM-YRFNVNNLFDKTYV 670 A G +GGG YVG + D + +PS A A+ + M +VNNLF+K Y Sbjct: 623 APYG--VGGGLNYVGRRTGDQAGSFMLPSYVTARALAYWQFTPKMKLSLDVNNLFNKRYY 680 Query: 671 SVCLARGDCFYGARRSAVLSATYRF 695 S G R+A L+ +F Sbjct: 681 SSSYNSLWIMPGDERNATLALNIKF 705 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.316 0.131 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,162,147 Number of extensions: 92563 Number of successful extensions: 388 Number of sequences better than 1.0e-08: 19 Number of HSP's gapped: 294 Number of HSP's successfully gapped: 21 Length of query: 695 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 603 Effective length of database: 1,184,250 Effective search space: 714102750 Effective search space used: 714102750 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)