BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0209.p (419 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 692 0.0 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 332 4e-92 gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [H... 321 6e-89 gi|300311609|ref|YP_003775701.1| sugar ABC transporter ATPase [H... 316 2e-87 gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase... 311 5e-86 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/413 (81%), Positives = 372/413 (90%), Gaps = 1/413 (0%) Query: 1 MNHLSAAQNIFIGREPRGRFGMFLDEETLNRQTAGIFARMRLKLDPRIQVGELTVAKQQM 60 MNHLSAAQNIFIGREPR G+F+DE+ LNRQ A IFARMRL +DP VGELTVA+QQM Sbjct: 109 MNHLSAAQNIFIGREPRKAMGLFIDEDELNRQAAAIFARMRLDMDPSTPVGELTVARQQM 168 Query: 61 VEIAKALSFNSRVLIMDEPTAALNNAEIDELFRIIRDLQTQGVGIVYISHKMDELRRISN 120 VEIAKALSF+SRVLIMDEPTAALNNAEI ELFRIIRDLQ QGVGIVYISHKMDELR+I++ Sbjct: 169 VEIAKALSFDSRVLIMDEPTAALNNAEIAELFRIIRDLQAQGVGIVYISHKMDELRQIAD 228 Query: 121 RVTVMRDGKYIATVPTEETPIDTIISMMVGRQLDGARPVTANAGDNKIVLEVKGLTRGHA 180 RV+VMRDGKYIATVP +ET +DTIISMMVGR LDG + + + N +VLEV+GL RG A Sbjct: 229 RVSVMRDGKYIATVPMQETSMDTIISMMVGRALDGEQRIPPDTSRNDVVLEVRGLNRGRA 288 Query: 181 IRDVSFQLRKGEILGFAGLMGAGRTEVARAIFGADPLDAGEIFIHGGKSVIKSPSDAVAH 240 IRDVSF LRKGEILGFAGLMGAGRTEVARAIFGADPL+AGEI IHGGK+VIKSP+DAVAH Sbjct: 289 IRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADPLEAGEIIIHGGKAVIKSPADAVAH 348 Query: 241 GIGYLSEDRKHFGLATGLDVKANVVMSSMNRFLKKGLFLDQAAIRSTAQSYVRQLSIKTP 300 GIGYLSEDRKHFGLA G+DV+AN+ +SSM RF + G F+DQ AIR AQ YVRQL+IKTP Sbjct: 349 GIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTRVG-FMDQRAIREAAQMYVRQLAIKTP 407 Query: 301 SIDQPARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDIGAKSEIYKLLNTLAEQGKA 360 S++Q ARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGID+GAKSEIYKLL+ LAEQGKA Sbjct: 408 SVEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKA 467 Query: 361 IVMISSELPEVLRMSHRVLVMCEGRITGELSAAEASQEKIMQLATQRPSAVAT 413 IVMISSELPEVLRMSHRVLVMCEGRITGEL+ A+A+QEKIMQLATQR SAVA+ Sbjct: 468 IVMISSELPEVLRMSHRVLVMCEGRITGELARADATQEKIMQLATQRESAVAS 520 Score = 89.0 bits (219), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 7/229 (3%) Query: 180 AIRDVSFQLRKGEILGFAGLMGAGRTEVARAIFGADPLDAGEIFIHGGKSVIKSPSDAVA 239 A+ + F+L GE+ G GAG++ + + + G D+G+I + G I P A A Sbjct: 37 ALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILLDGKPVEITEPRQAQA 96 Query: 240 HGIGYLSEDRKHFGLATGLDVKANVVMSSMNRFLKKGLFLDQAAI-RSTAQSYVRQLSIK 298 GIG + ++ L L N+ + R GLF+D+ + R A + R Sbjct: 97 LGIGIIHQE---LNLMNHLSAAQNIFIGREPR-KAMGLFIDEDELNRQAAAIFARMRLDM 152 Query: 299 TPSIDQPARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDIGAKSEIYKLLNTLAEQG 358 PS P L+ QQ + IAK L D +L DEPT ++ +E+++++ L QG Sbjct: 153 DPST--PVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFRIIRDLQAQG 210 Query: 359 KAIVMISSELPEVLRMSHRVLVMCEGRITGELSAAEASQEKIMQLATQR 407 IV IS ++ E+ +++ RV VM +G+ + E S + I+ + R Sbjct: 211 VGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGR 259 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 332 bits (851), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 184/421 (43%), Positives = 268/421 (63%), Gaps = 9/421 (2%) Query: 3 HLSAAQNIFIGREPRGRFGMFLDEETLNRQTAGIFARMRLKLDPRIQVGELTVAKQQMVE 62 ++S A N+F+G E R R G+ +D + +T + ++ G L++A+QQ VE Sbjct: 95 NISVAANVFMGSELRTRLGL-IDHAAMRSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVE 153 Query: 63 IAKALSFNSRVLIMDEPTAALNNAEIDELFRIIRDLQTQGVGIVYISHKMDELRRISNRV 122 IA+AL SR++IMDEPTAAL+ E ++LF ++R L+ +G+ I+YISH+M E+ +++RV Sbjct: 154 IARALVHRSRIVIMDEPTAALSERETEQLFNVVRRLRDEGLAIIYISHRMAEVYALADRV 213 Query: 123 TVMRDGKYIATVPTEETPIDTIISMMVGRQLD----GARPVTANAGDNKIVLEVKGLTRG 178 TV+RDG ++ + +E + I+ MMVGR L R A+A V++V+ L G Sbjct: 214 TVLRDGSFVGELVRDEIDSERIVQMMVGRSLSEFYQHQRIAPADAAQLPTVMQVRALA-G 272 Query: 179 HAIRDVSFQLRKGEILGFAGLMGAGRTEVARAIFGADPLDAGEIFIHGGKSVIKSPSDAV 238 IR SF +R GE+LGFAGL+GAGRTE+AR +FGADP G+I + G I P A+ Sbjct: 273 GKIRPASFDVRAGEVLGFAGLVGAGRTELARLLFGADPRSGGDILLEGRPVHIDQPRAAM 332 Query: 239 AHGIGYLSEDRKHFGLATGLDVKANVVMSSMNRFLKKGLFLDQAAIRSTAQSYVRQLSIK 298 GI Y+ EDRK GL + V AN M+ +R + GL ++ + A++ +++L++K Sbjct: 333 RAGIAYVPEDRKGQGLFLQMAVAANATMNVASRHTRLGLVRSRS-LGGVARAAIQRLNVK 391 Query: 299 TPSIDQPARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDIGAKSEIYKLLNTLAEQG 358 + P LSGGNQQK+++A+WL +L DEPTRG+DI AKSEIY+L++ LA QG Sbjct: 392 VAHPETPVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQG 451 Query: 359 KAIVMISSELPEVLRMSHRVLVMCEGRITGELSAAEASQEKIMQLATQRPSAVATAATTT 418 A+V+ISSELPEV+ + RVLVM EG ITGEL+ A +QE IM+LAT + V A + Sbjct: 452 VAVVVISSELPEVIGICDRVLVMREGMITGELAGAAITQENIMRLATD--TNVPRTAPAS 509 Query: 419 H 419 H Sbjct: 510 H 510 Score = 103 bits (257), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 125/243 (51%), Gaps = 10/243 (4%) Query: 169 VLEVKGLTRGH----AIRDVSFQLRKGEILGFAGLMGAGRTEVARAIFGADPLDAGEIFI 224 +L+++G+ + A+ D+ +R GEI G GAG++ + + + G D GEI + Sbjct: 6 LLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILL 65 Query: 225 HGGKSVIKSPSDAVAHGIGYLSEDRKHFGLATGLDVKANVVMSSMNRFLKKGLFLDQAAI 284 G ++ P + A GI + ++ +A + V ANV M S R + GL +D AA+ Sbjct: 66 DGRPVALRDPGASRAAGINLIYQE---LAVAPNISVAANVFMGSELR-TRLGL-IDHAAM 120 Query: 285 RSTAQSYVRQLSIKTPSIDQPARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDIGAK 344 RS + +RQL + D RL S QQ++ IA+ L+ I+ DEPT + Sbjct: 121 RSRTDAVLRQLGAGFGASDLAGRL-SIAEQQQVEIARALVHRSRIVIMDEPTAALSERET 179 Query: 345 SEIYKLLNTLAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELSAAEASQEKIMQLA 404 +++ ++ L ++G AI+ IS + EV ++ RV V+ +G GEL E E+I+Q+ Sbjct: 180 EQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMM 239 Query: 405 TQR 407 R Sbjct: 240 VGR 242 >gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 506 Score = 321 bits (823), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 169/406 (41%), Positives = 251/406 (61%), Gaps = 4/406 (0%) Query: 3 HLSAAQNIFIGREPRGRFGMFLDEETLNRQTAGIFARMRLKLDPRIQVGELTVAKQQMVE 62 +L A N+F+ RE R R+G +L + R+ I ++ + + + V +L+VA+QQ VE Sbjct: 94 YLDAVDNMFLARELRSRWG-WLQRAAMRRRAQEIIGQLGVAIPLDVPVCKLSVAQQQFVE 152 Query: 63 IAKALSFNSRVLIMDEPTAALNNAEIDELFRIIRDLQTQGVGIVYISHKMDELRRISNRV 122 IAKAL+ ++R+L++DEPTA L AE++ LF ++R L+ QGV I++ISH ++E+ I +R+ Sbjct: 153 IAKALALDARILVLDEPTATLTPAEVEHLFAVMRSLRAQGVAIIFISHHLEEIFEICDRI 212 Query: 123 TVMRDGKYIATVPTEETPIDTIISMMVGRQLDGA---RPVTANAGDNKIVLEVKGLTRGH 179 TV+RDG Y+AT T E ++ MMVGR+++ +P G+ ++VLEV L Sbjct: 213 TVLRDGAYVATCATAEVDQARLVEMMVGRRIENCFPPKPAKGGEGEGEVVLEVHALQLRR 272 Query: 180 AIRDVSFQLRKGEILGFAGLMGAGRTEVARAIFGADPLDAGEIFIHGGKSVIKSPSDAVA 239 FQLR+GEILGFAGL+G+GRTE A+ GA + ++ +HG P+ A+ Sbjct: 273 QAPVSQFQLRRGEILGFAGLVGSGRTETVLAMLGAHAALSCKLSMHGVPLRFADPAQALQ 332 Query: 240 HGIGYLSEDRKHFGLATGLDVKANVVMSSMNRFLKKGLFLDQAAIRSTAQSYVRQLSIKT 299 GIG L E RK GL T + NV +++ ++ GLFLD+ + ++ ++++ +K Sbjct: 333 AGIGLLPESRKEQGLITSFSILHNVSLNNYGKYRLGGLFLDRRREQQATEAAMQRVRVKA 392 Query: 300 PSIDQPARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDIGAKSEIYKLLNTLAEQGK 359 P LSGGNQQK+VIA+W+ +L FDEPTRGID+GAKSEIY+L+ QG Sbjct: 393 PGAQVRVDTLSGGNQQKVVIARWINHAMKVLIFDEPTRGIDVGAKSEIYQLMREFTAQGY 452 Query: 360 AIVMISSELPEVLRMSHRVLVMCEGRITGELSAAEASQEKIMQLAT 405 +I+MISSELPEV+ M+ RV V G I L + E+IM AT Sbjct: 453 SILMISSELPEVVGMADRVCVFRGGGIVATLEGEAVNAEEIMTHAT 498 Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 6/227 (2%) Query: 181 IRDVSFQLRKGEILGFAGLMGAGRTEVARAIFGADPLDAGEIFIHGGKSVIKSPSDAVAH 240 +R V ++R GE+ G GAG++ + + + G DAGEI I G S A+A Sbjct: 21 LRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRIDGQPCRFDSYRAAIAG 80 Query: 241 GIGYLSEDRKHFGLATGLDVKANVVMSSMNRFLKKGLFLDQAAIRSTAQSYVRQLSIKTP 300 G+G + ++ F L LD N+ ++ R + +L +AA+R AQ + QL + P Sbjct: 81 GVGVVFQE---FSLIPYLDAVDNMFLARELR--SRWGWLQRAAMRRRAQEIIGQLGVAIP 135 Query: 301 SIDQPARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDIGAKSEIYKLLNTLAEQGKA 360 +D P LS QQ + IAK L D IL DEPT + ++ ++ +L QG A Sbjct: 136 -LDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRSLRAQGVA 194 Query: 361 IVMISSELPEVLRMSHRVLVMCEGRITGELSAAEASQEKIMQLATQR 407 I+ IS L E+ + R+ V+ +G + AE Q +++++ R Sbjct: 195 IIFISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVGR 241 >gi|300311609|ref|YP_003775701.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 522 Score = 316 bits (809), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 179/407 (43%), Positives = 256/407 (62%), Gaps = 13/407 (3%) Query: 4 LSAAQNIFIGREPRGRFGMFLDEETLNRQTAGIFARMRL-KLDPRIQVGELTVAKQQMVE 62 LS A+N+F+ + PR RFG ++D + L + L +LDP VG+L + QQMVE Sbjct: 102 LSIAENLFLEKLPR-RFG-WIDRKKLAEAARAQMEVVGLGELDPWTPVGDLGLGHQQMVE 159 Query: 63 IAKALSFNSRVLIMDEPTAALNNAEIDELFRIIRDLQTQGVGIVYISHKMDELRRISNRV 122 IA+ L + R LI+DEPTA L N E++ LF I L+ +GV I+YISH+++EL+RI++R+ Sbjct: 160 IARNLIGSCRCLILDEPTAMLTNREVELLFSRIERLRAEGVAIIYISHRLEELKRIADRI 219 Query: 123 TVMRDGKYIATVPTEETPIDTIISMMVGRQLDGARPVTANAGDNKI---VLEVKGLTRGH 179 V+RDGK + + ++ +M G V +A +I VL ++GL R Sbjct: 220 VVLRDGKLVCNDDIGRYSTEQLVQLMAGE----LTKVDLDAEHRRIGAPVLRIRGLGRAP 275 Query: 180 AIRDVSFQLRKGEILGFAGLMGAGRTEVARAIFGADPLDAGEIFIHGGK--SVIKSPSDA 237 + S L GE+LG AGL+G+GRTE+ R IFGAD + GEIFI + + I+SP DA Sbjct: 276 VVHPASLALHAGEVLGIAGLIGSGRTELLRLIFGADRAEQGEIFIGDSQEPARIRSPKDA 335 Query: 238 VAHGIGYLSEDRKHFGLATGLDVKANVVMSSMNRFLKKGLFLDQAAIRSTAQSYVRQLSI 297 V GI ++EDRK GL + N ++++ + G+ LD AA S AQ YV++L I Sbjct: 336 VKAGIAMVTEDRKGQGLLLPQAISVNTSLANLGSVSRGGM-LDHAAESSVAQDYVKKLRI 394 Query: 298 KTPSIDQPARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDIGAKSEIYKLLNTLAEQ 357 ++ S+ Q A LSGGNQQK+VIA+WL RDC I+ FDEPTRGIDIGAKS+IY+L LA Q Sbjct: 395 RSGSVAQAAGELSGGNQQKVVIARWLYRDCPIMLFDEPTRGIDIGAKSDIYRLFAELAAQ 454 Query: 358 GKAIVMISSELPEVLRMSHRVLVMCEGRITGELSAAEASQEKIMQLA 404 GK ++++SS+L E++++ R+ VM GRI S + SQE+I+ A Sbjct: 455 GKGLLVVSSDLRELMQICDRIAVMSAGRIADTFSRDDWSQERILAAA 501 Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 6/220 (2%) Query: 184 VSFQLRKGEILGFAGLMGAGRTEVARAIFGADPLDAGEIFIHGGKSVIKSPSDAVAHGIG 243 + LR G++L G GAG++ +++ I G AG + + G S + A GI Sbjct: 31 IDLDLRPGQVLALTGENGAGKSTLSKIICGLVDASAGGMMLDGQPYAPASRTQAEGLGIR 90 Query: 244 YLSEDRKHFGLATGLDVKANVVMSSMNRFLKKGLFLDQAAIRSTAQSYVRQLSIKTPSID 303 + ++ L L + N+ + + R ++D+ + A++ + + + Sbjct: 91 MVMQE---LNLIPTLSIAENLFLEKLPRRFG---WIDRKKLAEAARAQMEVVGLGELDPW 144 Query: 304 QPARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDIGAKSEIYKLLNTLAEQGKAIVM 363 P L G+QQ + IA+ L+ C L DEPT + ++ + L +G AI+ Sbjct: 145 TPVGDLGLGHQQMVEIARNLIGSCRCLILDEPTAMLTNREVELLFSRIERLRAEGVAIIY 204 Query: 364 ISSELPEVLRMSHRVLVMCEGRITGELSAAEASQEKIMQL 403 IS L E+ R++ R++V+ +G++ S E+++QL Sbjct: 205 ISHRLEELKRIADRIVVLRDGKLVCNDDIGRYSTEQLVQL 244 >gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 311 bits (798), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 177/423 (41%), Positives = 265/423 (62%), Gaps = 18/423 (4%) Query: 3 HLSAAQNIFIGRE---PRGRFGMFLDEETLNRQTAGIFARMRLK-LDPRIQVGELTVAKQ 58 LS A+NIF+G E P GR ++ + R+ + + + ++ + V + Q Sbjct: 96 ELSVAENIFMGHEITLPGGR----MNYPAMYRRAEELMRELNMPDINVALPVSQYGGGHQ 151 Query: 59 QMVEIAKALSFNSRVLIMDEPTAALNNAEIDELFRIIRDLQTQGVGIVYISHKMDELRRI 118 Q+VEIAKAL+ ++R+LI+DEP+++L +EI L +II+DL+ +GV VYISHK+DE+ + Sbjct: 152 QLVEIAKALNKDARLLILDEPSSSLTASEIGVLLKIIKDLKARGVACVYISHKLDEVAEV 211 Query: 119 SNRVTVMRDGKYIATVPTEETPIDTIISMMVGRQLDGARPVTANAGDNKIVLEVKGLT-- 176 + ++V+RDGK+IAT P +E +D II+ MVGR++ P N ++VLE + +T Sbjct: 212 CDTISVIRDGKHIATTPMQEMDVDKIITQMVGREITAMYP-ERNHAIGEVVLEARNITCY 270 Query: 177 -----RGHAIRDVSFQLRKGEILGFAGLMGAGRTEVARAIFGA-DPLDAGEIFIHGGKSV 230 R + DVSF +R+GEILG AGL+GAGRTE+ AIFGA G++ + G + Sbjct: 271 DIDNPRRKRVDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAYRGRYEGQVLLEGKPAD 330 Query: 231 IKSPSDAVAHGIGYLSEDRKHFGLATGLDVKANVVMSSMNRFLKKGLFLDQAAIRSTAQS 290 SP ++ G+ + EDRKH G+ LDV N+ ++ +NRF +G +D +A T Q Sbjct: 331 TSSPLKSIRRGLCMVPEDRKHHGIVPDLDVGQNITLTVLNRF-SRGSRIDGSAELKTIQD 389 Query: 291 YVRQLSIKTPSIDQPARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDIGAKSEIYKL 350 + ++ +KT + P LSGGNQQK V+AK LL +L DEPTRG+D+GAK+EIY+L Sbjct: 390 EIGRMRVKTATPFLPITSLSGGNQQKAVLAKMLLAQPKVLILDEPTRGVDVGAKAEIYRL 449 Query: 351 LNTLAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELSAAEASQEKIMQLATQRPSA 410 ++ LA+ G AI+M+SSEL EVL +S RVLV+ EGR+ G+ SQE ++ A +P Sbjct: 450 ISELAKAGLAIIMVSSELAEVLGVSDRVLVIGEGRLRGDFVNDNLSQETVLAAAINQPVP 509 Query: 411 VAT 413 AT Sbjct: 510 QAT 512 Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 1/159 (0%) Query: 4 LSAAQNIFIGREPRGRFGMFLDEETLNRQTAGIFARMRLKL-DPRIQVGELTVAKQQMVE 62 L QNI + R G +D + RMR+K P + + L+ QQ Sbjct: 358 LDVGQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGNQQKAV 417 Query: 63 IAKALSFNSRVLIMDEPTAALNNAEIDELFRIIRDLQTQGVGIVYISHKMDELRRISNRV 122 +AK L +VLI+DEPT ++ E++R+I +L G+ I+ +S ++ E+ +S+RV Sbjct: 418 LAKMLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLAIIMVSSELAEVLGVSDRV 477 Query: 123 TVMRDGKYIATVPTEETPIDTIISMMVGRQLDGARPVTA 161 V+ +G+ + +T+++ + + + A P A Sbjct: 478 LVIGEGRLRGDFVNDNLSQETVLAAAINQPVPQATPRAA 516 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.320 0.136 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,183,425 Number of extensions: 48565 Number of successful extensions: 621 Number of sequences better than 1.0e-08: 93 Number of HSP's gapped: 540 Number of HSP's successfully gapped: 133 Length of query: 419 Length of database: 1,619,870 Length adjustment: 88 Effective length of query: 331 Effective length of database: 1,203,190 Effective search space: 398255890 Effective search space used: 398255890 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)