BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0135.p
         (191 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309800|ref|YP_003773892.1| isopenicillin N synthase [Herba...   293   6e-81

>gi|300309800|ref|YP_003773892.1| isopenicillin N synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 328

 Score =  293 bits (750), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 138/185 (74%), Positives = 154/185 (83%)

Query: 1   MRAHAQQYHAAMSTLSQRLLAIIALSLQLPEDFFNFALGTPIATQRMLHYPPQPADAQHN 60
              H++QY+ A+  LS RLL +IALSL++PEDFF   L TPIATQRMLHYPPQPA AQHN
Sbjct: 142 FETHSRQYYEAVRALSHRLLGVIALSLEMPEDFFTPVLHTPIATQRMLHYPPQPASAQHN 201

Query: 61  QIGAGAHTDWGLVTILAQDDIGGLEVRNADGDWVRATPIPGSFVVNIGDLLQRWSNDIYH 120
           QIGAGAHTDWGLVTILAQD IGGLE+ NA+GDWV A PI GSFVVNIGDLLQRWSND+YH
Sbjct: 202 QIGAGAHTDWGLVTILAQDAIGGLEICNAEGDWVSAPPIAGSFVVNIGDLLQRWSNDLYH 261

Query: 121 SNAHRVRNDNPAPRYSLPFFMDGDHAVTVSCLPSCCSDEHPARHAPCTIGDYLAQKVQET 180
           SNAHRV N   APRYSLPFF DGD A  V+CLP+CCS E PAR+APCTIGDYL  KV++T
Sbjct: 262 SNAHRVCNVGNAPRYSLPFFQDGDQAAVVACLPTCCSAERPARYAPCTIGDYLEMKVKQT 321

Query: 181 FGAAS 185
           FGA +
Sbjct: 322 FGAVA 326


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.134    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 666,576
Number of extensions: 29173
Number of successful extensions: 62
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 1,619,870
Length adjustment: 80
Effective length of query: 111
Effective length of database: 1,241,070
Effective search space: 137758770
Effective search space used: 137758770
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)