BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0251.0008.p
         (267 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311117|ref|YP_003775209.1| alpha/beta hydrolase superfamil...   154   5e-39

>gi|300311117|ref|YP_003775209.1| alpha/beta hydrolase superfamily
           protein [Herbaspirillum seropedicae SmR1]
          Length = 263

 Score =  154 bits (390), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 143/246 (58%), Gaps = 11/246 (4%)

Query: 17  IDGDPAKPWLVFLHEGLGCTAMWKDFPQRLCAATGCRGLLYDRLGYGLSDALQQTRAPDY 76
           +DG+   P +V LH+ LG  ++W+DFP +L   TG   + YDR G+G S A Q   AP +
Sbjct: 24  LDGE--LPAIVLLHDSLGAVSLWRDFPFQLSQQTGRAVVAYDRYGFGQSSARQDRLAPGF 81

Query: 77  LHRYALDELPSILVALLPQQAYILIGHSDGGSIALLHAAQRAPLLRAIVTEAAHVFVEPV 136
           +   A   L ++L  L   QA +L+GHS GG +A+  AA+    + A++TE+A  FVE  
Sbjct: 82  IAEEARPWLLTVLQQLGLTQA-VLLGHSVGGGMAIAAAAELPEQVVAVITESAQAFVEDR 140

Query: 137 TLDGIRAADRAYAD-GKLKGLQKYHG---DKTGQIFKAWSETWLAPAFADWNIEADLPRI 192
           TL GIR A   +A+  +L  L ++HG   DK   + +AW+ETWLAP FA W++   L R+
Sbjct: 141 TLQGIRKAREQFANPDQLARLARHHGQDQDKAQWVLEAWTETWLAPEFAAWSLTPALARL 200

Query: 193 ACPALVMQGVDDQYGTPAQVDAIVAGIAGSAGGHLGTARPAMLAGCGHSPHQEQPQAVLE 252
            CP L + G +D+YG+ A        IA       G  R  +L+GCGH PH+EQP AVL 
Sbjct: 201 HCPVLAIHGDEDEYGSLAHPHR----IATQPQAFPGQGRSLILSGCGHVPHREQPDAVLR 256

Query: 253 LMRDFV 258
            + +F+
Sbjct: 257 AVVEFL 262


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.138    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 865,530
Number of extensions: 34159
Number of successful extensions: 123
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 120
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 183
Effective length of database: 1,222,130
Effective search space: 223649790
Effective search space used: 223649790
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)