BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0245.0015.p
         (180 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309643|ref|YP_003773735.1| adenylate cyclase [Herbaspirill...   262   1e-71

>gi|300309643|ref|YP_003773735.1| adenylate cyclase [Herbaspirillum
           seropedicae SmR1]
          Length = 757

 Score =  262 bits (670), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 138/180 (76%), Positives = 152/180 (84%)

Query: 1   MQQSCLVLNEEFAKRNWPPLKIGIGLNTGNMRVGDMGSKIRKAYTVMGDAVNLSSRLESI 60
           MQQ+ L LNEEFA+RNWPPLKIGIGLNTG MRVGDMGS+IRKAYTVMGDAVNLSSRLESI
Sbjct: 578 MQQTALALNEEFARRNWPPLKIGIGLNTGQMRVGDMGSRIRKAYTVMGDAVNLSSRLESI 637

Query: 61  TKVYGVGVLVGQATRDAAPEFAYRELDSVRVKGKNEPVPIFEPLGLASELTAAQRASLDK 120
           TKVYGVGVLVG ATR+AAP+FAYRELD VRVKGK+EPVPI+EPL L  EL A  R  + +
Sbjct: 638 TKVYGVGVLVGAATREAAPQFAYRELDRVRVKGKHEPVPIYEPLALEQELDAGLREEVAQ 697

Query: 121 WTAALALVRRQQWDQAEQEILALQQENPHGLYDLYLQRIAYFREHPLPADWDGVTTFETK 180
           W AALALVR QQWD A+  + ALQ     GLY LYL+RIA++RE P PADWDGVTTFETK
Sbjct: 698 WHAALALVRAQQWDAAQAALHALQAAQARGLYALYLERIAHYRESPPPADWDGVTTFETK 757


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.134    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 522,746
Number of extensions: 18809
Number of successful extensions: 49
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 1,619,870
Length adjustment: 79
Effective length of query: 101
Effective length of database: 1,245,805
Effective search space: 125826305
Effective search space used: 125826305
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)