BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0236.0017.p
         (237 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312744|ref|YP_003776836.1| glucans biosynthesis glucosyltr...   311   4e-86

>gi|300312744|ref|YP_003776836.1| glucans biosynthesis
           glucosyltransferase H [Herbaspirillum seropedicae SmR1]
          Length = 857

 Score =  311 bits (796), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 174/247 (70%), Positives = 197/247 (79%), Gaps = 13/247 (5%)

Query: 1   MVPRPWGTLNPLSRWVEEATRAF-----------EQRAARRKGLPP--KEPVFVEDTLDL 47
           MVPRPWG LNP SRWVEE  R             + RA   +  PP   EP ++ED LD 
Sbjct: 103 MVPRPWGELNPFSRWVEEENRRLERRPSRWRRARKGRAKVVETPPPVDDEPRYIEDHLDQ 162

Query: 48  PDSPDPRGYWTHSGNVRRVVLLILMVMQSALATYFMSDVLPYHGEKPLEMVILGLFGLLF 107
            ++PDP+G+W H+GNVRR+ LLILMV+Q+++ATYFMSDVLPYHG KPLEMV+L LFGLLF
Sbjct: 163 SEAPDPKGHWQHTGNVRRITLLILMVLQTSMATYFMSDVLPYHGTKPLEMVVLFLFGLLF 222

Query: 108 CWVSAGFWTAMTGFLVLMRGDDPYLISHEQAGPKWIAPDARTAIVMPICNEDVARVFAGL 167
            WVSAGFWTAMTGFLVLMRGDD YLISHE+AG   IAP+ARTAIVMPICNEDVARVFAGL
Sbjct: 223 LWVSAGFWTAMTGFLVLMRGDDKYLISHEKAGNTEIAPEARTAIVMPICNEDVARVFAGL 282

Query: 168 RATYESVQRNGDLDRFDFFVLSDSGESDICVAELQAWAALCKEVDGFGRIFYRHRRRRVK 227
           RATYES++R G +  FDFF+LSDSGE+DIC AE  AW  LC+E  GFGRIFYRHRRRRVK
Sbjct: 283 RATYESLERTGQIQHFDFFILSDSGEADICAAETAAWNRLCRETGGFGRIFYRHRRRRVK 342

Query: 228 RKSGNLD 234
           RKSGNLD
Sbjct: 343 RKSGNLD 349


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.141    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 727,157
Number of extensions: 28050
Number of successful extensions: 106
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 105
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 1,619,870
Length adjustment: 82
Effective length of query: 155
Effective length of database: 1,231,600
Effective search space: 190898000
Effective search space used: 190898000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 129 (54.3 bits)