BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0229.0048.p
         (282 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312024|ref|YP_003776116.1| esterase [Herbaspirillum serope...   445   e-126

>gi|300312024|ref|YP_003776116.1| esterase [Herbaspirillum
           seropedicae SmR1]
          Length = 282

 Score =  445 bits (1145), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 216/278 (77%), Positives = 231/278 (83%), Gaps = 1/278 (0%)

Query: 4   ELLSGHACFGGVQGFYKHDSQEIGLPMRFSVFTPPQAKQG-PVPVLFYLAGLTCTEETFM 62
           E LS H CFGGVQG+Y+H S  IGL MRFSVF PPQA +G P+PVLFYLAGLTCTEETFM
Sbjct: 3   ETLSEHGCFGGVQGYYRHASPAIGLDMRFSVFVPPQASKGSPLPVLFYLAGLTCTEETFM 62

Query: 63  IKGGAQRVAAELGIMLVTPDTSPRGANIPGESDSWDFGAGAGFYLDATQAPWSKHYRMES 122
           IK GAQRVAAELG++LV  DTSPRGA I GESDSWDFG GAGFYLDATQAPWS+HYRMES
Sbjct: 63  IKAGAQRVAAELGMILVASDTSPRGAGIAGESDSWDFGVGAGFYLDATQAPWSQHYRMES 122

Query: 123 YVVQELRALIVKEFAADAARIGVFGHSMGGHGALTLALRHPAVYRSVSAFAPIAAPSQCP 182
           YVV +LR  ++  F AD  R+GVFGHSMGGHGALTLALRH  VYRSVSAFAPIAAP  C 
Sbjct: 123 YVVDDLRRAVLDNFPADPQRMGVFGHSMGGHGALTLALRHRDVYRSVSAFAPIAAPINCA 182

Query: 183 WGEKAFGNYLGGDRAGWLEHDASALMRKTATPFPQGILIDQGLADKFLAEQLLPQEFEAA 242
           WG+KAF +YLG DR  W +HDAS LMR   TPFPQGILIDQGLADKFLAEQLLP+ FEAA
Sbjct: 183 WGQKAFSHYLGTDRQAWKQHDASELMRALQTPFPQGILIDQGLADKFLAEQLLPERFEAA 242

Query: 243 CAEAKQPLELRRHDDYDHGYYFISTFMEDHLRFHHRIL 280
           C EA QPL LRRH  YDHGYYFI TFMEDHLRFHH  L
Sbjct: 243 CKEASQPLSLRRHAGYDHGYYFIETFMEDHLRFHHANL 280


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.138    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,014,182
Number of extensions: 45965
Number of successful extensions: 129
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 128
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 198
Effective length of database: 1,222,130
Effective search space: 241981740
Effective search space used: 241981740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)