BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0226.0011.p (515 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310371|ref|YP_003774463.1| sugar ABC transporter ATPase [H... 869 0.0 gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase... 458 e-130 gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 399 e-112 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 366 e-102 gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [H... 340 2e-94 >gi|300310371|ref|YP_003774463.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/513 (83%), Positives = 472/513 (92%) Query: 1 MSTILEMRGIEKTFPGVKALNNVNLAVRTGEIHAVVGENGAGKSTLMKVLSGVYPHGSYS 60 MS ILEMRGIEK+FPGVKALNNVNLAVR GEIHA+VGENGAGKSTLMKVLSGVYPHGSYS Sbjct: 1 MSNILEMRGIEKSFPGVKALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSGVYPHGSYS 60 Query: 61 GDIIYQGQTREFKDIVDSESVGIIIIHQELALVPLLSITENLFLGNEQASGGVIDWEQSY 120 GDI+Y+G+ R FKDI DSE +GIIIIHQELALVPLLS+ ENLFLGNEQA GGVIDWEQSY Sbjct: 61 GDIVYKGEVRAFKDIRDSEHLGIIIIHQELALVPLLSVMENLFLGNEQARGGVIDWEQSY 120 Query: 121 AKAKELLAKVGLKDPPSTLITNLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDA 180 +AKELLAKVGLK+ P T + +LGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDA Sbjct: 121 VRAKELLAKVGLKESPLTQVGDLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDA 180 Query: 181 LLELLLELKAQGISSILISHKLNEISKVADSITVLRDGATVDTFDCRKEEISEDRIIQNM 240 LLELLLELK QGI+SILISHKLNEISKVADSITVLRDG TVDTFDCR E ISEDRIIQ+M Sbjct: 181 LLELLLELKRQGIASILISHKLNEISKVADSITVLRDGTTVDTFDCRAEPISEDRIIQHM 240 Query: 241 VGREMADRYPKREPHIGETIFEVRQWRVHHPIHPDRVVIKDIDFNVRKGEIVGIAGLMGA 300 VGREMADRYP+R+P IGE IFEVR WRVHHP+H DR+ IKD++ +VR GEIVGIAGLMGA Sbjct: 241 VGREMADRYPQRDPQIGEVIFEVRDWRVHHPLHTDRLAIKDVNMSVRAGEIVGIAGLMGA 300 Query: 301 GRTELAKSIFGRAYGAKISGEVHLHGKKIDVGTIQKAINHGIAYVTEDRKGDGLVLDEDI 360 GRTELAKSIFGRAYG KI+G+ LHGK++D+ TI+KAI GIAYVTEDRKGDGLVL+EDI Sbjct: 301 GRTELAKSIFGRAYGKKITGQAFLHGKEVDLSTIEKAIAKGIAYVTEDRKGDGLVLEEDI 360 Query: 361 KKNISLANLGAISDKSVIDEAREFKVAADFRTKMRIRCSSVLQKVVNLSGGNQQKVVLSK 420 KKNISLANLG +S+++VIDEARE+K+AADF+ +MRIRCSSVLQKVVNLSGGNQQKVVLSK Sbjct: 361 KKNISLANLGGVSERTVIDEAREYKIAADFKQQMRIRCSSVLQKVVNLSGGNQQKVVLSK 420 Query: 421 WLFSNPEVLILDEPTRGIDVGAKFEIYTLINQLAAEGKCIIMISSEMPELLGMCDRIYVM 480 WLFS PEVLILDEPTRGIDVGAKFEIY +I++LAAEGKCIIMISSEMPELLGMCDRIYVM Sbjct: 421 WLFSQPEVLILDEPTRGIDVGAKFEIYNIISKLAAEGKCIIMISSEMPELLGMCDRIYVM 480 Query: 481 NEGQFVGQYTAAEASQEKIMRSIVRNERIVKNG 513 NEGQFVG AEA+QE IMR+I+RN+RI + G Sbjct: 481 NEGQFVGHLPKAEATQENIMRAIMRNKRIDEPG 513 >gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 458 bits (1179), Expect = e-130, Method: Compositional matrix adjust. Identities = 236/503 (46%), Positives = 345/503 (68%), Gaps = 5/503 (0%) Query: 4 ILEMRGIEKTFPGVKALNNVNLAVRTGEIHAVVGENGAGKSTLMKVLSGVYPHGSYSGDI 63 +LEM+GI K+F GV+ALN +++ +R GE + GENGAGKSTLMK+LSGVYPHG++ G+I Sbjct: 5 LLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEI 64 Query: 64 IYQGQTREFKDIVDSESVGIIIIHQELALVPLLSITENLFLGNE-QASGGVIDWEQSYAK 122 ++ G+ + + D+E+ GI+IIHQEL LVP LS+ EN+F+G+E GG +++ Y + Sbjct: 65 LWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPAMYRR 124 Query: 123 AKELLAKVGLKDPPSTL-ITNLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDAL 181 A+EL+ ++ + D L ++ G G QQL+EIAKAL+K+ +LLILDEP++SL S+ L Sbjct: 125 AEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIGVL 184 Query: 182 LELLLELKAQGISSILISHKLNEISKVADSITVLRDGATVDTFDCRKEEISEDRIIQNMV 241 L+++ +LKA+G++ + ISHKL+E+++V D+I+V+RDG + T +E+ D+II MV Sbjct: 185 LKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPM--QEMDVDKIITQMV 242 Query: 242 GREMADRYPKREPHIGETIFEVRQWRVHHPIHPDRVVIKDIDFNVRKGEIVGIAGLMGAG 301 GRE+ YP+R IGE + E R + +P R + D+ F+VR+GEI+GIAGL+GAG Sbjct: 243 GREITAMYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVGAG 302 Query: 302 RTELAKSIFGRAYGAKISGEVHLHGKKIDVGTIQKAINHGIAYVTEDRKGDGLVLDEDIK 361 RTEL +IFG AY + G+V L GK D + K+I G+ V EDRK G+V D D+ Sbjct: 303 RTELVSAIFG-AYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDVG 361 Query: 362 KNISLANLGAISDKSVIDEAREFKVAADFRTKMRIRCSSVLQKVVNLSGGNQQKVVLSKW 421 +NI+L L S S ID + E K D +MR++ ++ + +LSGGNQQK VL+K Sbjct: 362 QNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGNQQKAVLAKM 421 Query: 422 LFSNPEVLILDEPTRGIDVGAKFEIYTLINQLAAEGKCIIMISSEMPELLGMCDRIYVMN 481 L + P+VLILDEPTRG+DVGAK EIY LI++LA G IIM+SSE+ E+LG+ DR+ V+ Sbjct: 422 LLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLAIIMVSSELAEVLGVSDRVLVIG 481 Query: 482 EGQFVGQYTAAEASQEKIMRSIV 504 EG+ G + SQE ++ + + Sbjct: 482 EGRLRGDFVNDNLSQETVLAAAI 504 Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 4/229 (1%) Query: 279 IKDIDFNVRKGEIVGIAGLMGAGRTELAKSIFGRAYGAKISGEVHLHGKKIDVGTIQKAI 338 + ID +R GE VG+ G GAG++ L K + G GE+ GK + +++ Sbjct: 21 LNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEILWDGKPLQAHSVRDTE 80 Query: 339 NHGIAYVTEDRKGDGLVLDEDIKKNISLANLGAISDKSVIDEAREFKVAADFRTKMRIRC 398 GI + ++ LV + + +NI + + + ++ ++ A + ++ + Sbjct: 81 AAGIVIIHQELM---LVPELSVAENIFMGHEITLPGGR-MNYPAMYRRAEELMRELNMPD 136 Query: 399 SSVLQKVVNLSGGNQQKVVLSKWLFSNPEVLILDEPTRGIDVGAKFEIYTLINQLAAEGK 458 +V V GG+QQ V ++K L + +LILDEP+ + + +I L A G Sbjct: 137 INVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIGVLLKIIKDLKARGV 196 Query: 459 CIIMISSEMPELLGMCDRIYVMNEGQFVGQYTAAEASQEKIMRSIVRNE 507 + IS ++ E+ +CD I V+ +G+ + E +KI+ +V E Sbjct: 197 ACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQMVGRE 245 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 399 bits (1024), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/513 (42%), Positives = 330/513 (64%), Gaps = 18/513 (3%) Query: 4 ILEMRGIEKTFPGVKALNNVNLAVRTGEIHAVVGENGAGKSTLMKVLSGVYPHGSYSGDI 63 ++ +R + K FPGV AL+N + GE+HA++GENGAGKSTLMK+LSGVY S GDI Sbjct: 22 VIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDS--GDI 79 Query: 64 IYQGQTREFKDIVDSESVGIIIIHQELALVPLLSITENLFLGNE--QASGGVIDWEQSYA 121 + G+ E + ++++GI IIHQEL L+ LS +N+F+G E +A G ID ++ Sbjct: 80 LLDGKPVEITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNR 139 Query: 122 KAKELLAKVGLKDPPSTLITNLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDAL 181 +A + A++ L PST + L V +QQ++EIAKALS + ++LI+DEPTA+LN ++ L Sbjct: 140 QAAAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAEL 199 Query: 182 LELLLELKAQGISSILISHKLNEISKVADSITVLRDGATVDTFDCRKEEISEDRIIQNMV 241 ++ +L+AQG+ + ISHK++E+ ++AD ++V+RDG + T +E S D II MV Sbjct: 200 FRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPM--QETSMDTIISMMV 257 Query: 242 GREM--ADRYPKREPHIGETIFEVRQWRVHHPIHPDRVVIKDIDFNVRKGEIVGIAGLMG 299 GR + R P + + + EVR I+D+ F +RKGEI+G AGLMG Sbjct: 258 GRALDGEQRIPP-DTSRNDVVLEVRGLNRGR-------AIRDVSFTLRKGEILGFAGLMG 309 Query: 300 AGRTELAKSIFGRAYGAKISGEVHLHGKKIDVGTIQKAINHGIAYVTEDRKGDGLVLDED 359 AGRTE+A++IFG +GE+ +HG K + + A+ HGI Y++EDRK GL + D Sbjct: 310 AGRTEVARAIFG--ADPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMD 367 Query: 360 IKKNISLANLGAISDKSVIDEAREFKVAADFRTKMRIRCSSVLQKVVNLSGGNQQKVVLS 419 ++ NI+L+++G + +D+ + A + ++ I+ SV Q+ LSGGNQQK+V++ Sbjct: 368 VQANIALSSMGRFTRVGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIA 427 Query: 420 KWLFSNPEVLILDEPTRGIDVGAKFEIYTLINQLAAEGKCIIMISSEMPELLGMCDRIYV 479 KWL + ++L DEPTRGIDVGAK EIY L++ LA +GK I+MISSE+PE+L M R+ V Sbjct: 428 KWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLV 487 Query: 480 MNEGQFVGQYTAAEASQEKIMRSIVRNERIVKN 512 M EG+ G+ A+A+QEKIM+ + E V + Sbjct: 488 MCEGRITGELARADATQEKIMQLATQRESAVAS 520 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 366 bits (939), Expect = e-102, Method: Compositional matrix adjust. Identities = 204/513 (39%), Positives = 318/513 (61%), Gaps = 34/513 (6%) Query: 2 STILEMRGIEKTFPGVKALNNVNLAVRTGEIHAVVGENGAGKSTLMKVLSGVYPHGSYSG 61 + +L+MRGI K+F AL++++L +R GEIHA++GENGAGKSTLMKVLSGV H G Sbjct: 4 TPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGV--HAPDQG 61 Query: 62 DIIYQGQTREFKDIVDSESVGIIIIHQELALVPLLSITENLFLGNE-QASGGVIDWEQSY 120 +I+ G+ +D S + GI +I+QELA+ P +S+ N+F+G+E + G+ID Sbjct: 62 EILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMR 121 Query: 121 AKAKELLAKVGLKDPPSTLITNLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSDA 180 ++ +L ++G S L L + +QQ +EIA+AL +++I+DEPTA+L+E +++ Sbjct: 122 SRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQ 181 Query: 181 LLELLLELKAQGISSILISHKLNEISKVADSITVLRDGATVDTFDCRKEEISEDRIIQNM 240 L ++ L+ +G++ I ISH++ E+ +AD +TVLRDG+ V + ++EI +RI+Q M Sbjct: 182 LFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVG--ELVRDEIDSERIVQMM 239 Query: 241 VGREMADRY------PKREPHIGETIFEVRQWRVHHPIHPDRVVIKDIDFNVRKGEIVGI 294 VGR +++ Y P + T+ +VR I+ F+VR GE++G Sbjct: 240 VGRSLSEFYQHQRIAPADAAQL-PTVMQVRALAGGK--------IRPASFDVRAGEVLGF 290 Query: 295 AGLMGAGRTELAKSIFGRAYGAKISGEVHLHGKKIDVGTIQKAINHGIAYVTEDRKGDGL 354 AGL+GAGRTELA+ +FG + G++ L G+ + + + A+ GIAYV EDRKG GL Sbjct: 291 AGLVGAGRTELARLLFG--ADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGL 348 Query: 355 VLDEDIKKNISL------ANLGAISDKSVIDEAREFKVAADFRTKMRIRCSSVLQKVVNL 408 L + N ++ LG + +S+ AR ++ ++ + V L Sbjct: 349 FLQMAVAANATMNVASRHTRLGLVRSRSLGGVARAAI------QRLNVKVAHPETPVGKL 402 Query: 409 SGGNQQKVVLSKWLFSNPEVLILDEPTRGIDVGAKFEIYTLINQLAAEGKCIIMISSEMP 468 SGGNQQKV+L++WL P+VLILDEPTRG+D+ AK EIY L+++LA++G +++ISSE+P Sbjct: 403 SGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELP 462 Query: 469 ELLGMCDRIYVMNEGQFVGQYTAAEASQEKIMR 501 E++G+CDR+ VM EG G+ A +QE IMR Sbjct: 463 EVIGICDRVLVMREGMITGELAGAAITQENIMR 495 Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 43/246 (17%) Query: 277 VVIKDIDFNVRKGEIVGIAGLMGAGRTELAKSIFGRAYGAKISGEVHLHGKKIDVGTIQK 336 + + D+ +R GEI + G GAG++ L K + G A GE+ L G+ + + Sbjct: 20 LALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSG--VHAPDQGEILLDGRPVALRDPGA 77 Query: 337 AINHGIAYVTEDRKGDGLVLDEDIKKNISLANLGAISDKSVIDEAREFKVAADFRTK--- 393 + GI + ++ + NIS+A A F + ++ RT+ Sbjct: 78 SRAAGINLIYQELA---------VAPNISVA-------------ANVF-MGSELRTRLGL 114 Query: 394 -----MRIRCSSVLQKVV----------NLSGGNQQKVVLSKWLFSNPEVLILDEPTRGI 438 MR R +VL+++ LS QQ+V +++ L ++I+DEPT + Sbjct: 115 IDHAAMRSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAAL 174 Query: 439 DVGAKFEIYTLINQLAAEGKCIIMISSEMPELLGMCDRIYVMNEGQFVGQYTAAEASQEK 498 +++ ++ +L EG II IS M E+ + DR+ V+ +G FVG+ E E+ Sbjct: 175 SERETEQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSER 234 Query: 499 IMRSIV 504 I++ +V Sbjct: 235 IVQMMV 240 >gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 546 Score = 340 bits (871), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 189/485 (38%), Positives = 294/485 (60%), Gaps = 12/485 (2%) Query: 2 STILEMRGIEKTFPGVKALNNVNLAVRTGEIHAVVGENGAGKSTLMKVLSGVYPHGSYSG 61 + +L + GI K F GV AL +V VR GE+ A++GENGAGKSTL+K+L+G+ H G Sbjct: 33 APVLSLSGIGKRFQGVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGI--HQPDEG 90 Query: 62 DIIYQGQTREFKDIVDSESVGIIIIHQELALVPLLSITENLFLGNEQASGGV--IDWEQS 119 I G+ F D+ GI +HQE + LS+ EN+++G + G IDW + Sbjct: 91 SIHLGGREVRFASAQDAMRGGITAVHQETVMFEELSVAENIWIGRQPLCGTPRRIDWRRM 150 Query: 120 YAKAKELLAKVGLKDPPSTLITNLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDSD 179 +A+ L A++ + P + +L V ++ +EIA+ALS++ +++I+DEPTA+L+ + Sbjct: 151 EDEARALFARLEVDLPVRARVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIG 210 Query: 180 ALLELLLELKAQGISSILISHKLNEISKVADSITVLRDGATVDTFDCRKEEISEDRIIQN 239 L ++ +L+ G + I ISHK +EI VAD TVLRDG + + + +I+E +++ Sbjct: 211 ELYRIIGQLRRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGEL--ADITEQQLVAL 268 Query: 240 MVGREMADRYPKREPHIGETIFEVRQWRVHHPIHPDRVVIKDIDFNVRKGEIVGIAGLMG 299 MVGRE+ + + + + V + V H HP D+ F VR GEI+G GL+G Sbjct: 269 MVGREVGQVFSRAASNTEDQTAPVLE--VKHLSHPSE--FDDVSFAVRPGEILGFYGLVG 324 Query: 300 AGRTELAKSIFGRAYGAKISGEVHLHGKKIDVGTIQKAINHGIAYVTEDRKGDGLVLDED 359 AGR+E+ ++FG + A+ G V + G+++ + + +AI HG+AYV EDR+ G +L Sbjct: 325 AGRSEVMHALFGLSPEAQ--GAVWIDGREVKLCSPAQAIAHGLAYVPEDRQRQGALLSLP 382 Query: 360 IKKNISLANLGAISDKSVIDEAREFKVAADFRTKMRIRCSSVLQKVVNLSGGNQQKVVLS 419 I +NI+L L I RE +A ++ ++ S Q V LSGGNQQKVVL+ Sbjct: 383 IFQNITLPVLPGIGFFLRRHRRREIDIARRLCEQLELKASHFHQHVAQLSGGNQQKVVLA 442 Query: 420 KWLFSNPEVLILDEPTRGIDVGAKFEIYTLINQLAAEGKCIIMISSEMPELLGMCDRIYV 479 KWL + P VLILDEPT+GID+G+K ++ I +L A+G +I++SSE+PE++GM DRI V Sbjct: 443 KWLATQPRVLILDEPTKGIDIGSKAAVHRFIGELVAQGLAVILVSSELPEVMGMSDRIVV 502 Query: 480 MNEGQ 484 M++G+ Sbjct: 503 MHQGR 507 Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 8/232 (3%) Query: 277 VVIKDIDFNVRKGEIVGIAGLMGAGRTELAKSIFGRAYGAKISGEVHLHGKKIDVGTIQK 336 V ++D+ F VR GE++ + G GAG++ L K + G G +HL G+++ + Q Sbjct: 49 VALQDVGFTVRPGEVMALLGENGAGKSTLVKILTG--IHQPDEGSIHLGGREVRFASAQD 106 Query: 337 AINHGIAYVTEDRKGDGLVLDE-DIKKNISLANLGAISDKSVIDEAREFKVAADFRTKMR 395 A+ GI V ++ ++ +E + +NI + ID R A ++ Sbjct: 107 AMRGGITAVHQET----VMFEELSVAENIWIGRQPLCGTPRRIDWRRMEDEARALFARLE 162 Query: 396 IRCSSVLQKVVNLSGGNQQKVVLSKWLFSNPEVLILDEPTRGIDVGAKFEIYTLINQLAA 455 + V +V +LS + V +++ L +V+I+DEPT + E+Y +I QL Sbjct: 163 VDLP-VRARVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIGELYRIIGQLRR 221 Query: 456 EGKCIIMISSEMPELLGMCDRIYVMNEGQFVGQYTAAEASQEKIMRSIVRNE 507 G +I IS + E+ + DR V+ +G+F+ A+ ++++++ +V E Sbjct: 222 AGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQLVALMVGRE 273 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.317 0.136 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,443,641 Number of extensions: 58918 Number of successful extensions: 872 Number of sequences better than 1.0e-08: 126 Number of HSP's gapped: 616 Number of HSP's successfully gapped: 207 Length of query: 515 Length of database: 1,619,870 Length adjustment: 89 Effective length of query: 426 Effective length of database: 1,198,455 Effective search space: 510541830 Effective search space used: 510541830 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)