BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0221.0048.p
         (533 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310016|ref|YP_003774108.1| cyclopropane-fatty-acyl-phospho...   672   0.0  
gi|300310389|ref|YP_003774481.1| cyclopropane-fatty-acyl-phospho...   166   4e-42

>gi|300310016|ref|YP_003774108.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 407

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/399 (78%), Positives = 353/399 (88%)

Query: 1   VFWEKKLAAWVDDVRHATALPLRLELWNGSRFDFSDNAPQVTLRVPHVSALPYLLRPSLS 60
           VFWEKKL AWV+++R+ +ALPLRL LWNG ++DF    P+VTL+VPH SA+  LL PSL+
Sbjct: 7   VFWEKKLDAWVENIRNVSALPLRLVLWNGQQYDFGSGTPEVTLKVPHASAITSLLTPSLA 66

Query: 61  NLGEAYVEGKIDVDGPVTSIINVANLLAAKTLKAEGKLSRIVRTVRHSKEKDAEAIRYHY 120
           NLGEAYVEGKI+V+G V SII VAN LA+ TLKAEG+L R+VR+V H++++DAEAI+YHY
Sbjct: 67  NLGEAYVEGKIEVEGKVKSIIQVANSLASNTLKAEGRLGRMVRSVTHTRKRDAEAIQYHY 126

Query: 121 DVSNEFYKLFLDENMVYSCAYFENGDEDLATAQIKKIDHILTKIKVRPGDKLLDIGCGWG 180
           DVSN+FYKLFLDE+MVYSCAYFENGDEDLATAQIKKIDHIL KI++RPG  LLDIGCGWG
Sbjct: 127 DVSNDFYKLFLDEHMVYSCAYFENGDEDLATAQIKKIDHILEKIQLRPGQTLLDIGCGWG 186

Query: 181 ALVLRAAQKFGAQCVGVTLSENQYALARERVEKAGLSDRIEIRLQDYRDVTGTFDRITSV 240
           ALVLRAAQK+GA+CVGVTLS NQYALARERVE AGLSDRIEIRLQDYRDVTG+FDRITSV
Sbjct: 187 ALVLRAAQKYGARCVGVTLSRNQYALARERVEAAGLSDRIEIRLQDYRDVTGSFDRITSV 246

Query: 241 GMFEHVGLKNLPMYFAHINSLLADDGLVMNHGITSTDIENGESPYGGGEFVDKYVFPAGE 300
           GMFEHVG+KNLP YFA I  LLAD G+ MNHGITSTDIENGESPYG GEF+DKYVFPAGE
Sbjct: 247 GMFEHVGIKNLPSYFAQIRKLLADGGMAMNHGITSTDIENGESPYGAGEFIDKYVFPAGE 306

Query: 301 LPHVSLVLKTMQQGGLEVFDVENLRRHYARTCAIWADNFETRAEEIKKLTDEKRYRIWRV 360
           LPH+S VLKTMQ+GGLE FDVENLRRHYARTC IWADNFE   E I ++TDEK YRIWRV
Sbjct: 307 LPHISTVLKTMQEGGLEAFDVENLRRHYARTCGIWADNFEANTEAIHRVTDEKHYRIWRV 366

Query: 361 YLAGSAHGFDKDWISLYQVVCGKANRPAVALPQSRRYIY 399
           YLAGSA+GF++DWISLYQVVC KA R A  LP SR+YIY
Sbjct: 367 YLAGSAYGFERDWISLYQVVCTKAGRSAQQLPWSRQYIY 405


>gi|300310389|ref|YP_003774481.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 403

 Score =  166 bits (420), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 174/368 (47%), Gaps = 17/368 (4%)

Query: 28  NGSRFDFSD--NAPQVTLRVPHVSALPYLLRPSLSNLGEAYVEGKIDVDGPVTSIINVA- 84
           +G+   F D    P   LR+    A   +LR      GEAY  G +D    + +++ +A 
Sbjct: 40  HGTTLTFGDLRQPPSAQLRILDWRACGAILRAGDIGFGEAYGHGWVDTP-DLAALLRLAM 98

Query: 85  -NLLAAKTLKAEGKLSRIVRTVRH-----SKEKDAEAIRYHYDVSNEFYKLFLDENMVYS 138
            N     +    G L+     +RH     ++      I  HYD+ N+FY+L+LD  M YS
Sbjct: 99  RNRQVLSSAVEGGWLASWWYRLRHLLRSNTRSGSRRNIHAHYDLGNDFYRLWLDPTMSYS 158

Query: 139 CAYFENGDEDLATAQIKKIDHILTKIKVRPGDKLLDIGCGWGALVLRAAQKFGAQCVGVT 198
            A F    + L  AQ  K   I+ ++ +R GD++L+IGCGWG     AA + G +  GVT
Sbjct: 159 SAIFSAPGQSLEQAQAAKYQRIVDQLGLRAGDRVLEIGCGWGGFAEHAA-RLGIRVHGVT 217

Query: 199 LSENQYALARERVEKAGLSDRIEIRLQDYRDVTGTFDRITSVGMFEHVGLKNLPMYFAHI 258
           +S  Q A A+ER+    L     + L DYRD+ G +D I S+ MFE VG +    YF  +
Sbjct: 218 ISPAQLAYAQERMRTQQLDHLAHLELCDYRDLDGQYDAIVSIEMFEAVGERFWQTYFDTV 277

Query: 259 NSLLADDGLVMNHGITSTDIENG--ESPYGGGEFVDKYVFPAGELPHVSLVLKTMQQGGL 316
            + L   G  +   I S  IE    E      +F+ +++FP G LP      +  Q+ GL
Sbjct: 278 CARLKAGGQAL---IQSITIEEAVFERYRDSADFIREFIFPGGMLPSHERFSRCAQRAGL 334

Query: 317 EVFDVENLRRHYARTCAIWADNFETRAEEI-KKLTDEKRYRIWRVYLAGSAHGFDKDWIS 375
              +  +  R YA T   W D+F  + E I  +  DE+  R+W++Y      GFD+    
Sbjct: 335 ATRERFHFGRDYAETLRRWHDSFLAQRETIAAQGFDERFRRLWQLYYVFCEVGFDEGQTD 394

Query: 376 LYQVVCGK 383
           + Q +  K
Sbjct: 395 VVQFLLHK 402


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,618,569
Number of extensions: 67040
Number of successful extensions: 168
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 164
Number of HSP's successfully gapped: 2
Length of query: 533
Length of database: 1,619,870
Length adjustment: 90
Effective length of query: 443
Effective length of database: 1,193,720
Effective search space: 528817960
Effective search space used: 528817960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 133 (55.8 bits)