BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0221.0027.p
         (402 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310036|ref|YP_003774128.1| 2-octaprenyl-6-methoxyphenol hy...   474   e-135
gi|300313476|ref|YP_003777568.1| 2-polyprenyl-6-methoxyphenol hy...    76   6e-15

>gi|300310036|ref|YP_003774128.1| 2-octaprenyl-6-methoxyphenol
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 382

 Score =  474 bits (1219), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/379 (63%), Positives = 286/379 (75%), Gaps = 1/379 (0%)

Query: 24  DYDVVICGAGLVGLSVAALLQKRGMPAQRIALIDAKSAEQAAHDPRTIALSHGSQQILHE 83
           D+D++ICG G VG SVA LL +R +PA RIAL+D KS EQAA DPRTIALS+GS+QIL E
Sbjct: 5   DFDLIICGGGPVGQSVAGLLARRQLPAARIALVDMKSPEQAAADPRTIALSYGSRQILDE 64

Query: 84  IGAWSLMASAVTSINQIHVSRRRHFGRTLINREDYDLPALGYVVRYGALVTALSAALAST 143
           +GAW  +  + T+I QIHVSRR HFGRTL++R+DY LPALGYV RYG +  AL++A+A  
Sbjct: 65  LGAWDDIGRSATAIEQIHVSRRGHFGRTLLDRKDYQLPALGYVARYGEVNRALASAIAPL 124

Query: 144 KVTVLRPAQVSAIDEQGVQVDVQLANGRALSAGIVVQAEGGVFSEQTAKAVQRDYHQVAI 203
            ++++RPA+   I+E+   V V L +GR L A +V+QAEGGVF EQ  K +QRDY Q+ I
Sbjct: 125 GLSLMRPAEAQQIEEEDQHVAVTLKDGRILRAHLVIQAEGGVFGEQQHKTLQRDYQQLGI 184

Query: 204 VAHVTTTAAIAHRAFERFTAEGPLALLPQDDGYALVWCARPDTAKRLLSLDEKAFLHELG 263
           +AHV     IAHRAFERFT EGPLALLPQDDGYALVWC RP T ++L++L++  FL  L 
Sbjct: 185 IAHVQADGVIAHRAFERFTDEGPLALLPQDDGYALVWCVRPATGEQLMALEDAGFLAALQ 244

Query: 264 EVFGGRVGRFASCSVRHSYPLGLNAAPGASARTVAIGNAAQTLHPVAGQGLNLGLRDAVV 323
             FG RVGRF   S RH++PLGLNA PG S R VAIGNAAQTLHPVAGQGLNLGLRDA V
Sbjct: 245 RTFGERVGRFTRISPRHAFPLGLNARPGQSRRVVAIGNAAQTLHPVAGQGLNLGLRDARV 304

Query: 324 LASALTRTSSATAALQQFAAQRGRDRNATIRLTDLMARVFASAPDGAPSQALLGLSLGLI 383
           LA  L R  S   ALQ F  QRG+DR+ TIRLTDLMAR+FA +P G+P QA LGLSLG I
Sbjct: 305 LADVLAREISPQ-ALQAFERQRGQDRSLTIRLTDLMARIFAGSPQGSPLQAALGLSLGAI 363

Query: 384 DVAAPAKRLLAEQMMFGWR 402
           D+   A+ LLAE MMFG R
Sbjct: 364 DLLPGARGLLAEHMMFGRR 382


>gi|300313476|ref|YP_003777568.1| 2-polyprenyl-6-methoxyphenol
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 410

 Score = 75.9 bits (185), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 146/324 (45%), Gaps = 23/324 (7%)

Query: 26  DVVICGAGLVGLSVAALLQKRGMPAQRIALIDAKSA-EQAAHDPRTIALSHGSQQILHEI 84
           D+ I G G VG + A  L + G     +A     +  + A+ D R  AL+H +Q++L  +
Sbjct: 18  DICIVGDGAVGKTAALGLAQAGFKVTLLAPPPKAAPPDTASWDVRVYALNHTAQRLLSSV 77

Query: 85  GAWSLMA----SAVTSINQIH---VSRRRHFGRTLINREDYDLPALGYVVRYGALVTALS 137
             W  M     +AV ++  +H   V  +   G    +       AL ++V    L  AL 
Sbjct: 78  RVWDAMEGERIAAVDNMT-VHGDGVPDKARPGLLSFDAYAARTDALAWIVEDRNLDQALD 136

Query: 138 AALASTKVTVLRPAQVSAIDEQGVQVDVQLANGRALSAGIVVQAEGG---VFSEQTAKAV 194
           AAL       +   + +A+   G    + L +G++LSA +V+ A+G    V  +      
Sbjct: 137 AALRFAPNIRVVQGRATALAVLGETATLTLESGQSLSASLVIGADGANSWVRGQCDIGLD 196

Query: 195 QRDYHQVAIVAHVTTTAAIAHR--AFERFT-AEGPLALLP-QDDGYALVWCARPDTAKRL 250
            R Y Q AIV + +    + HR  A++ F+  EG +ALLP   +  +LVW A    A +L
Sbjct: 197 YRAYGQNAIVTNFSCE--LPHRGVAYQWFSPTEGVIALLPLPGNRVSLVWSAPQALADQL 254

Query: 251 LSLDEKAFLHELGEVFGGRVGRFASC--SVRHSYPLGLNAAPGA--SARTVAIGNAAQTL 306
           L L   A    L +     +G        V  ++PL L   P A  + R   IG+AA  +
Sbjct: 255 LKLPLSALAERLAQWAAPVLGALTPLQPEVAKAFPLRL-IKPHAMIAPRVALIGDAAHVV 313

Query: 307 HPVAGQGLNLGLRDAVVLASALTR 330
           HP+AG G+NLG  D   L   L +
Sbjct: 314 HPMAGHGMNLGFGDVAALIDILLK 337


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.132    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,138,479
Number of extensions: 41745
Number of successful extensions: 223
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 220
Number of HSP's successfully gapped: 3
Length of query: 402
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 315
Effective length of database: 1,207,925
Effective search space: 380496375
Effective search space used: 380496375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 132 (55.5 bits)