BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0021.p
         (215 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311052|ref|YP_003775144.1| inositol monophosphatase [Herba...   140   1e-34

>gi|300311052|ref|YP_003775144.1| inositol monophosphatase
           [Herbaspirillum seropedicae SmR1]
          Length = 265

 Score =  140 bits (352), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 68/84 (80%), Positives = 69/84 (82%)

Query: 104 VTEVDKAAEDAIIEVLKTAYPDHAILAEESGPSANLHDENENVWIIDPLDGTTNFIHGFP 163
           VTEVDKAAEDAII+VLK AYPDHAILAEESG S NLHDENENVWIIDPLDGTTNFIHGFP
Sbjct: 42  VTEVDKAAEDAIIDVLKNAYPDHAILAEESGASDNLHDENENVWIIDPLDGTTNFIHGFP 101

Query: 164 QYCVSIALXIHGFPQYCVSILPER 187
           QYCVSIAL   G     V   P R
Sbjct: 102 QYCVSIALQQRGIITQAVVYDPTR 125



 Score =  106 bits (265), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 54/62 (87%)

Query: 35  DFVTEVPGRLDGFFEKGLKPWDIAAGSLLVTEAGGIVGTFKGEADYLYKGDVLAGNPKIF 94
           D      GRLDGFFEKGLKPWDIAAGSLLVTEAGGIVGTFKG++DYLYKGDV+A +PKIF
Sbjct: 195 DLAYVAAGRLDGFFEKGLKPWDIAAGSLLVTEAGGIVGTFKGDSDYLYKGDVIAASPKIF 254

Query: 95  XR 96
            +
Sbjct: 255 AQ 256



 Score = 73.2 bits (178), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/40 (87%), Positives = 37/40 (92%)

Query: 1  MLNTAIKAARRGAAVINRASFDVSLLKVTKKQHNDFVTEV 40
          MLNTAIKAARR A +INRASFDVSLLKV+KK HNDFVTEV
Sbjct: 6  MLNTAIKAARRAATIINRASFDVSLLKVSKKSHNDFVTEV 45


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.138    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 711,279
Number of extensions: 29374
Number of successful extensions: 85
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 3
Length of query: 215
Length of database: 1,619,870
Length adjustment: 81
Effective length of query: 134
Effective length of database: 1,236,335
Effective search space: 165668890
Effective search space used: 165668890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)