BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0187.0023.p
         (255 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312099|ref|YP_003776191.1| carboxylesterase [Herbaspirillu...   110   8e-26

>gi|300312099|ref|YP_003776191.1| carboxylesterase [Herbaspirillum
           seropedicae SmR1]
          Length = 303

 Score =  110 bits (276), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 22/252 (8%)

Query: 1   MIHGLGGTQYDLGSLHKILQKAG-------IDTHAVTLSGHGTRPEDLIPVRAEQWIDML 53
           ++HGL G+Q ++GS+ K L+KAG       ID ++  L+     P        E+W  ++
Sbjct: 33  LLHGLCGSQLEMGSIPKQLKKAGCTVIPLNIDNYSAALTNPRVSPN------WEEWCAVV 86

Query: 54  IAQYRELQPRYEQLHVMGMCMGALLALVLCERVGHTEKQGKLVTLAPPVYIDGWSTPWYA 113
            ++   L+  +  + + G+ MGA LAL +  R   +++   +V L+P +  DGWS PWY 
Sbjct: 87  ESRVARLKEEFRTVSLCGLSMGATLALAVAAR---SKELLSVVLLSPVLQYDGWSVPWYW 143

Query: 114 NLRSLCYLIPGVASRMKVEEGEPYGIKNTLVRAVVKAKFERGD--NFHYRWVPMACIRQV 171
            L ++ Y +         +E EPYGIKN  +R  V +  E+          +P   +R  
Sbjct: 144 KLLTVVYDLG--FRNWSYKESEPYGIKNFEMRRRVASALEKDGVAAVGAASIPARHLRAA 201

Query: 172 DRLRSWVFAGARNIKAPTLIVHAREDELTSLRSAE-FLQARLADARTVV-LENSYHMICV 229
            R+  +V      ++  TLI+H+ +DE  S R+AE  LQ   A+ R VV L + YH+I V
Sbjct: 202 LRMIDYVKQSLPLVRTDTLIIHSIDDETASPRNAEQILQYINAEVRKVVWLGDCYHIITV 261

Query: 230 DNDRDQVANSVL 241
           DN+R+ V N  +
Sbjct: 262 DNEREIVTNETV 273


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.137    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 799,665
Number of extensions: 31756
Number of successful extensions: 107
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 172
Effective length of database: 1,226,865
Effective search space: 211020780
Effective search space used: 211020780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 129 (54.3 bits)