BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0185.0035.p (505 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311722|ref|YP_003775814.1| phosphate acetyl/butaryl transf... 613 e-177 gi|300309605|ref|YP_003773697.1| phosphate acetyltransferase [He... 258 9e-70 >gi|300311722|ref|YP_003775814.1| phosphate acetyl/butaryl transferase [Herbaspirillum seropedicae SmR1] Length = 484 Score = 613 bits (1582), Expect = e-177, Method: Compositional matrix adjust. Identities = 308/421 (73%), Positives = 348/421 (82%) Query: 2 SNDDLCIVRNRIFDEIMVGDAASIERTLTAQDIQLFAVLSGDVNPQHLDAEFASSTRFHG 61 S+D L ++RNRIF EI VGD+A+I RTLT DIQLFAV+SGD NPQHLD FA TRFHG Sbjct: 18 SDDVLGLIRNRIFSEIAVGDSATITRTLTLADIQLFAVISGDANPQHLDLAFAKETRFHG 77 Query: 62 VIAHGMLGGALISAVLGTRLPGPGTIYLGQTLSFKAPARIGDTLTISVCVTERHEVGKRL 121 +IAHGM GGALISAVLGTRLPGPGTIYLGQTL F AP RIGDTL +V V ER E K L Sbjct: 78 LIAHGMFGGALISAVLGTRLPGPGTIYLGQTLRFVAPVRIGDTLRTTVTVKERDEARKLL 137 Query: 122 KLACSCINQNGITVIEGQADVIAPTERISMPRTTLPEVRLLSGENGLLRLLEHVRPMGAV 181 LAC+CINQ+G+TVIEG+A V+APTE I RT+LPEV + G+ L LLEH R G Sbjct: 138 TLACACINQDGVTVIEGEAKVLAPTEPILRRRTSLPEVSMKMGDADLQLLLEHARKPGPA 197 Query: 182 VTAVVHPCDELSLSAALDAQAAGLIVPVLVAPRAKLQAVADSNKLDISTLRIEDVPHSHA 241 AVVHPCDELSL+A LDA AAGLI P+LVAPR++L A+A+S+KLDIS +EDVPHSHA Sbjct: 198 PVAVVHPCDELSLAAVLDAHAAGLISPILVAPRSRLLALAESHKLDISAFPLEDVPHSHA 257 Query: 242 AAARAVELAASGEVAALMKGSLHTDELMSAVLACPALRTGRRLSHCFLMQTPSYPRPFII 301 AAARA+EL G+V LMKGSLHT+E M AV+ACP L T RR+SHC+LMQTPSYPRPFII Sbjct: 258 AAARAIELVMHGKVEMLMKGSLHTEEFMGAVVACPGLHTKRRMSHCYLMQTPSYPRPFII 317 Query: 302 TDAAINIAPDLDEKADIIRNAIGLAQAIGVQQPRVAILAAVETVNPRMTATLDAAALCKM 361 TDAA+NI P L EKADIIRNAI LA IGV+ P+VAILAAVETVNPRM ATLDAAALCKM Sbjct: 318 TDAAVNIEPGLAEKADIIRNAIELAHVIGVKTPKVAILAAVETVNPRMPATLDAAALCKM 377 Query: 362 ADRGQIRGAVLDGPLAFDNAVSMAAARIKGIVSDVAGRADILVVPDLESGNMLAKQLEYL 421 ADRGQI GA+LDGPLAFDNAVS +AR+KGI S+VAG+ADILVVPDLESGN+LAKQLEY+ Sbjct: 378 ADRGQITGAILDGPLAFDNAVSPVSARVKGIRSEVAGQADILVVPDLESGNLLAKQLEYM 437 Query: 422 G 422 G Sbjct: 438 G 438 >gi|300309605|ref|YP_003773697.1| phosphate acetyltransferase [Herbaspirillum seropedicae SmR1] Length = 319 Score = 258 bits (659), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 148/243 (60%), Positives = 181/243 (74%), Gaps = 1/243 (0%) Query: 180 AVVTAVVHPCDELSLSAALDAQAAGLIVPVLVAPRAKLQAVADSNKLDISTLRIEDVPHS 239 A+ AVVHPC +L AL+A+ GL PVLV P +++ +A++ + + L I HS Sbjct: 25 AMRVAVVHPCSPEALQGALEARDEGLFDPVLVGPETRIRRIAEAADISLQGLPIVPAEHS 84 Query: 240 HAAAARAVELAASGEVAALMKGSLHTDELMSAVLA-CPALRTGRRLSHCFLMQTPSYPRP 298 HAAAARAVE+A +GEV ALMKGSLH+DEL+ AV+ LRT RR+SH + M P+YP+P Sbjct: 85 HAAAARAVEMAVAGEVGALMKGSLHSDELLGAVVGGASGLRTERRISHVYAMAIPAYPKP 144 Query: 299 FIITDAAINIAPDLDEKADIIRNAIGLAQAIGVQQPRVAILAAVETVNPRMTATLDAAAL 358 IITDAAINIAP L K DI +NAI L +GV +P VA+LAAVETVNP M +TLDAAAL Sbjct: 145 LIITDAAINIAPTLAHKRDICQNAIDLLHVMGVPRPHVAVLAAVETVNPAMPSTLDAAAL 204 Query: 359 CKMADRGQIRGAVLDGPLAFDNAVSMAAARIKGIVSDVAGRADILVVPDLESGNMLAKQL 418 MA R QI GA++DGPLAFDNA+S+ AA +KGIVS VAG ADIL+VPDLE+GNMLAKQL Sbjct: 205 TVMATRHQITGALVDGPLAFDNAISLQAASVKGIVSPVAGSADILLVPDLEAGNMLAKQL 264 Query: 419 EYL 421 YL Sbjct: 265 IYL 267 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.322 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,426,361 Number of extensions: 56103 Number of successful extensions: 204 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 204 Number of HSP's successfully gapped: 2 Length of query: 505 Length of database: 1,619,870 Length adjustment: 89 Effective length of query: 416 Effective length of database: 1,198,455 Effective search space: 498557280 Effective search space used: 498557280 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)