BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0185.0026.p
         (304 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311832|ref|YP_003775924.1| ethanolamine ammonia-lyase larg...   251   6e-68
gi|300311831|ref|YP_003775923.1| ethanolamine ammonia-lyase smal...   213   1e-56

>gi|300311832|ref|YP_003775924.1| ethanolamine ammonia-lyase large
           subunit [Herbaspirillum seropedicae SmR1]
          Length = 468

 Score =  251 bits (640), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 118/125 (94%)

Query: 1   MYFETGQGSALSAGAHHGMDQQTCEARAYAVARKFKPLLVNTVVGFIGPEYLYDGKQIIR 60
           MYFETGQGSALSA AHHG+DQQTCEARAYAVAR FKPLLVNTVVGFIGPEYLYDGKQIIR
Sbjct: 288 MYFETGQGSALSANAHHGIDQQTCEARAYAVARAFKPLLVNTVVGFIGPEYLYDGKQIIR 347

Query: 61  AGLEDHFCAKLLGLPMGCDVCYTNHAEADQNDMDNLLTLLATAGCNFVMGIPGSDDIMLN 120
           AGLEDHFCAKLLGLPMGCDVCYTNHAEADQNDMD LLTLL  AGC FVMGIPGSDDIMLN
Sbjct: 348 AGLEDHFCAKLLGLPMGCDVCYTNHAEADQNDMDVLLTLLGVAGCTFVMGIPGSDDIMLN 407

Query: 121 YQTXA 125
           YQT +
Sbjct: 408 YQTTS 412


>gi|300311831|ref|YP_003775923.1| ethanolamine ammonia-lyase small
           subunit [Herbaspirillum seropedicae SmR1]
          Length = 289

 Score =  213 bits (543), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/161 (65%), Positives = 125/161 (77%), Gaps = 1/161 (0%)

Query: 140 QEDRIYDLAFVIADGLSSLAIARNAVPFLQAVQQRIAPRSWTQAPPTIVRQGRVAIGDEI 199
           Q  R YD+  VIADGLS+LAI RNA PFL  + +RIAP  W+ APP IV+QGRVA+ DEI
Sbjct: 129 QPQRRYDVGLVIADGLSALAIVRNAAPFLAELMKRIAPEGWSMAPPVIVQQGRVAVADEI 188

Query: 200 GSLLRTRLVVVMIGERPGLSSPDSMGLYLSWMPRTGMTDAERNCISNVRPEGMRYDEAAG 259
           G LL  +LVV++IGERPGLSSPDSMGLYL+WMP  G+TDA RNCISNVRPEG+ Y EAA 
Sbjct: 189 GELLGVKLVVILIGERPGLSSPDSMGLYLTWMPARGLTDASRNCISNVRPEGLPYPEAAY 248

Query: 260 KLDYLLAEAHRRGLTGVGLKDESAGDPQVLAPPGMNFLLVD 300
           KL YL+A+AH+R L+GV LKDE+A + + L     NFLL D
Sbjct: 249 KLHYLMAQAHQRSLSGVALKDETASEGEAL-DVRRNFLLGD 288


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 999,920
Number of extensions: 42224
Number of successful extensions: 101
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 2
Length of query: 304
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 219
Effective length of database: 1,217,395
Effective search space: 266609505
Effective search space used: 266609505
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)