BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0172.0013.p
         (243 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310016|ref|YP_003774108.1| cyclopropane-fatty-acyl-phospho...   126   1e-30
gi|300310389|ref|YP_003774481.1| cyclopropane-fatty-acyl-phospho...   108   4e-25

>gi|300310016|ref|YP_003774108.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 407

 Score =  126 bits (317), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/136 (47%), Positives = 85/136 (62%), Gaps = 5/136 (3%)

Query: 41  KRSRMVGEMHYDLGNDFYAAMLDSRMTYTCGYW-NTATTLEEAQEAKLDLICRKLKLKPG 99
           KR     + HYD+ NDFY   LD  M Y+C Y+ N    L  AQ  K+D I  K++L+PG
Sbjct: 116 KRDAEAIQYHYDVSNDFYKLFLDEHMVYSCAYFENGDEDLATAQIKKIDHILEKIQLRPG 175

Query: 100 MRVLDIGCGWGSFMAFAAERYGIEAVGVSISKEQIALAKERHGHLPL----DFRLQDYRE 155
             +LDIGCGWG+ +  AA++YG   VGV++S+ Q ALA+ER     L    + RLQDYR+
Sbjct: 176 QTLLDIGCGWGALVLRAAQKYGARCVGVTLSRNQYALARERVEAAGLSDRIEIRLQDYRD 235

Query: 156 LNERFDAIVSIGMFEH 171
           +   FD I S+GMFEH
Sbjct: 236 VTGSFDRITSVGMFEH 251


>gi|300310389|ref|YP_003774481.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 403

 Score =  108 bits (270), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 12/152 (7%)

Query: 50  HYDLGNDFYAAMLDSRMTYTCGYWNT-ATTLEEAQEAKLDLICRKLKLKPGMRVLDIGCG 108
           HYDLGNDFY   LD  M+Y+   ++    +LE+AQ AK   I  +L L+ G RVL+IGCG
Sbjct: 139 HYDLGNDFYRLWLDPTMSYSSAIFSAPGQSLEQAQAAKYQRIVDQLGLRAGDRVLEIGCG 198

Query: 109 WGSFMAFAAERYGIEAVGVSISKEQIALAKERHGHLPLD----FRLQDYRELNERFDAIV 164
           WG F   AA R GI   GV+IS  Q+A A+ER     LD      L DYR+L+ ++DAIV
Sbjct: 199 WGGFAEHAA-RLGIRVHGVTISPAQLAYAQERMRTQQLDHLAHLELCDYRDLDGQYDAIV 257

Query: 165 SIGMFEHEXADYDKTLMAWHSNFEAAWPRFEA 196
           SI MFE     +      W + F+    R +A
Sbjct: 258 SIEMFEAVGERF------WQTYFDTVCARLKA 283


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.326    0.138    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 717,442
Number of extensions: 26662
Number of successful extensions: 111
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 2
Length of query: 243
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 160
Effective length of database: 1,226,865
Effective search space: 196298400
Effective search space used: 196298400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 129 (54.3 bits)