BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0170.0023.p
         (156 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313476|ref|YP_003777568.1| 2-polyprenyl-6-methoxyphenol hy...   125   2e-30

>gi|300313476|ref|YP_003777568.1| 2-polyprenyl-6-methoxyphenol
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 410

 Score =  125 bits (314), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/145 (53%), Positives = 96/145 (66%), Gaps = 27/145 (18%)

Query: 4   TSSHPSSNAAARKIAGASSPSDICIVGNGAIGKTAALALAQAGLRVTLLAPAAIL----- 58
           T +HP+S+++A    GA +  DICIVG+GA+GKTAAL LAQAG +VTLLAP         
Sbjct: 3   THAHPNSSSSA----GAGT--DICIVGDGAVGKTAALGLAQAGFKVTLLAPPPKAAPPDT 56

Query: 59  -------------SRDLLSSIKVWDALDAERVAVVDGMDVTGD---DENHPGHLVFDAYS 102
                        ++ LLSS++VWDA++ ER+A VD M V GD   D+  PG L FDAY+
Sbjct: 57  ASWDVRVYALNHTAQRLLSSVRVWDAMEGERIAAVDNMTVHGDGVPDKARPGLLSFDAYA 116

Query: 103 AHVDALAWIVEDRNLNAALDAALXF 127
           A  DALAWIVEDRNL+ ALDAAL F
Sbjct: 117 ARTDALAWIVEDRNLDQALDAALRF 141


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 475,216
Number of extensions: 18324
Number of successful extensions: 120
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 119
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 1,619,870
Length adjustment: 78
Effective length of query: 78
Effective length of database: 1,250,540
Effective search space: 97542120
Effective search space used: 97542120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)