BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0170.0021.p
         (198 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313475|ref|YP_003777567.1| thiol:disulfide interchange pro...   322   2e-89

>gi|300313475|ref|YP_003777567.1| thiol:disulfide interchange
           protein [Herbaspirillum seropedicae SmR1]
          Length = 255

 Score =  322 bits (824), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 144/187 (77%), Positives = 167/187 (89%)

Query: 12  GLYEVQVDGDVIYTDAKAQYLFIGRVVDSQTYRDFTKEKIQAINKVKFSDLPLDLAIKTV 71
           GLYE+Q+DGDVIYTDAKAQYLFIGRVVDSQTYRD+TKEKI+++N++ FS LPLD AIKTV
Sbjct: 69  GLYEIQIDGDVIYTDAKAQYLFIGRVVDSQTYRDYTKEKIESLNQIPFSGLPLDKAIKTV 128

Query: 72  KGNGKRAIAVFEDPNCGYCKRFQKTLLDVDNLTVYTFQYNILAQDSIEKSRNIWCSSNPG 131
           KGNGKR IA+FEDPNC YCKR  KTL +VDN+T YTFQYNIL+ DSI KSRNIWC+ NP 
Sbjct: 129 KGNGKRVIAIFEDPNCIYCKRLHKTLQEVDNITYYTFQYNILSPDSIVKSRNIWCAPNPS 188

Query: 132 KAWSDWMLNGKEASAAPASCSAPHDQVLALGQKMKITGTPTIIFADGSRIPGAIDAKGLE 191
           +AWS+WM+NGKEA AA  SC+APH+ VLALGQK+K+TGTPTI F DGSRIPGA+DAK LE
Sbjct: 189 RAWSEWMVNGKEAPAAATSCNAPHEDVLALGQKLKVTGTPTIFFTDGSRIPGAVDAKSLE 248

Query: 192 QKLATLK 198
           QKL++LK
Sbjct: 249 QKLSSLK 255


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 544,802
Number of extensions: 19075
Number of successful extensions: 50
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 50
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 1,619,870
Length adjustment: 80
Effective length of query: 118
Effective length of database: 1,241,070
Effective search space: 146446260
Effective search space used: 146446260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)