BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0168.0049.p
         (343 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310187|ref|YP_003774279.1| anthranilate phosphoribosyltran...   474   e-135

>gi|300310187|ref|YP_003774279.1| anthranilate
           phosphoribosyltransferase [Herbaspirillum seropedicae
           SmR1]
          Length = 336

 Score =  474 bits (1219), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 237/312 (75%), Positives = 260/312 (83%)

Query: 24  SGKEMLAAARFIKEIGRGKDGARSLSRDDAQLLYGAMLDGRVSDLELGAILLAMRVKGES 83
           S      AA FIKEIGRGKDGARSLSR DA+ +Y AMLDGRVSDLELGAILLAMR+KGES
Sbjct: 21  SSHAAFVAAPFIKEIGRGKDGARSLSRQDARTMYQAMLDGRVSDLELGAILLAMRIKGES 80

Query: 84  VEEIAGFLAAAEASFTPLQAPLGDYAPVVIPSYNGSRHMANLTPLLALLLAREGVPVLMH 143
           V+EIAGFL AAEAS   L+AP G YAPVV+PSYNGSR MANLTPLL +LL R GVPVLMH
Sbjct: 81  VQEIAGFLDAAEASMPALRAPAGPYAPVVLPSYNGSRKMANLTPLLCMLLVRRGVPVLMH 140

Query: 144 GVTQDPQRVTSAEIFEALGIHHAIGPHEAEAALANRQPAFIPIQVLAPKLARLLAMRRLL 203
           GVT DPQRVTSAEIF ALG  HA    +A+A +A  QPAF+PI VLAP +ARLL MRR+L
Sbjct: 141 GVTHDPQRVTSAEIFTALGQPHAASIEQAQALMAAGQPAFVPITVLAPAIARLLGMRRIL 200

Query: 204 GVRNSTHTLVKIMQPFAAPALRLTSYTHPEYLEMLGKYFVGAAPAQRGDAFLMRGTEGET 263
           GVRNSTHT+VKIMQPFA PALRLTSYTHPEYLEML  YF  AAP +RGDAFLMRGTEGET
Sbjct: 201 GVRNSTHTVVKIMQPFAGPALRLTSYTHPEYLEMLTDYFSNAAPPERGDAFLMRGTEGET 260

Query: 264 VANARRAQQIDWFHGAERTLLVEKQKVAEEIPDLPEGRDAAATARWIEAVLRGEKSVPIA 323
           VANARRAQ+IDWF G  RT+LVEKQ VAEE+PDLPEG+DAAATA WI  VL G++ VP A
Sbjct: 261 VANARRAQRIDWFSGGTRTVLVEKQSVAEELPDLPEGQDAAATAAWIREVLEGQRPVPEA 320

Query: 324 IAEQVGHCMAVS 335
           IAEQV HC+ V+
Sbjct: 321 IAEQVEHCVDVA 332


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 995,076
Number of extensions: 38969
Number of successful extensions: 133
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 133
Number of HSP's successfully gapped: 2
Length of query: 343
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 257
Effective length of database: 1,212,660
Effective search space: 311653620
Effective search space used: 311653620
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)